; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012250 (gene) of Chayote v1 genome

Gene IDSed0012250
OrganismSechium edule (Chayote v1)
DescriptionPathogenic type III effector avirulence factor Avr cleavage site
Genome locationLG07:2310892..2314303
RNA-Seq ExpressionSed0012250
SyntenySed0012250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150335.2 uncharacterized protein LOC101219200 [Cucumis sativus]1.0e-4770.59Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES----SGPVVLNHQKPIMPKP
        MEDYY +R  IP+FGNWEWN+HLPF+ CFESS++AGF    DLYVAGDLY+NDVVTPAMIVVPR   KRDRQG Q KKE     S  +  N+    MPKP
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES----SGPVVLNHQKPIMPKP

Query:  VDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        VDEDLYKISP LL AK KKKRGLSY+TNCF+PTCLI
Subjt:  VDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

XP_022156085.1 uncharacterized protein LOC111023056 [Momordica charantia]2.7e-4363.89Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVA-------GFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES-----SGPVVLNH
        MEDYY +R  IP+FGNW+WN+HLPFTQCF+SS  A       G+S+  DLYVAGDLY NDVVTPAMIVVPRST KR RQ  +GKKE+     +  V    
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVA-------GFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES-----SGPVVLNH

Query:  QKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
             PKPVDEDLYKISP LL AKPKKKRGLSY+ +CF+PTCL+
Subjt:  QKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

XP_022960043.1 uncharacterized protein LOC111460910 [Cucurbita moschata]1.4e-4771.85Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV
        MEDY  QR  IPTFGNWEWN+HLPFTQCFE+S++AG+ D  DLYVAGDLYQNDVVTPAMIVVPR   KRDR G Q K++    S P V  H    MPKPV
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV

Query:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        DEDLYKISP   CAKPKKKRGLSY+T+CF+PTCLI
Subjt:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

XP_023550147.1 uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]1.0e-4771.85Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV
        MEDY  QR  IPTFGNWEWN+HLPFTQCFE+S++AG+ D  DLYVAGDLYQNDVVTPAMIVVPR   KRDR G Q  ++    S P V  H    MPKPV
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV

Query:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        DEDLYKISP  LCAKPKKKRGLSY+T+CF+PTCLI
Subjt:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

XP_038899118.1 uncharacterized protein LOC120086508 [Benincasa hispida]4.0e-4769.5Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKK-------ESSGPVVLNH--QKP
        MEDYY +R  IP+FGNWEWN+HLPF+ CF+SS++AG+    DLYVAGDLYQNDVVTPAMIVVPR   KRDRQG QG+K       ES    ++NH   KP
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKK-------ESSGPVVLNH--QKP

Query:  IMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
         MPKPVDEDLYKISP LL AK KKKRGLSY+TNCF+PTCLI
Subjt:  IMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

TrEMBL top hitse value%identityAlignment
A0A0A0KA54 Uncharacterized protein5.1e-4870.59Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES----SGPVVLNHQKPIMPKP
        MEDYY +R  IP+FGNWEWN+HLPF+ CFESS++AGF    DLYVAGDLY+NDVVTPAMIVVPR   KRDRQG Q KKE     S  +  N+    MPKP
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES----SGPVVLNHQKPIMPKP

Query:  VDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        VDEDLYKISP LL AK KKKRGLSY+TNCF+PTCLI
Subjt:  VDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

A0A6J1DPB1 uncharacterized protein LOC1110230561.3e-4363.89Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVA-------GFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES-----SGPVVLNH
        MEDYY +R  IP+FGNW+WN+HLPFTQCF+SS  A       G+S+  DLYVAGDLY NDVVTPAMIVVPRST KR RQ  +GKKE+     +  V    
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVA-------GFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKES-----SGPVVLNH

Query:  QKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
             PKPVDEDLYKISP LL AKPKKKRGLSY+ +CF+PTCL+
Subjt:  QKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

A0A6J1GPL2 uncharacterized protein LOC1114559795.6e-3960.99Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKK---------ESSGPVVLNHQKP
        MEDYY +R  IP+FGNWEWN+HL F+ CFESS++AG+    DLYV GDLY+NDVVTPAMIVVPR   KR++QG QGKK         ES    +L   +P
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKK---------ESSGPVVLNHQKP

Query:  IMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
          PKPVDEDLYKI P LL AK +KKRGLS+  N F+P CLI
Subjt:  IMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

A0A6J1H7P4 uncharacterized protein LOC1114609106.6e-4871.85Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV
        MEDY  QR  IPTFGNWEWN+HLPFTQCFE+S++AG+ D  DLYVAGDLYQNDVVTPAMIVVPR   KRDR G Q K++    S P V  H    MPKPV
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV

Query:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        DEDLYKISP   CAKPKKKRGLSY+T+CF+PTCLI
Subjt:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

A0A6J1KPV8 uncharacterized protein LOC1114976316.6e-4871.85Show/hide
Query:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV
        MEDY  QR  IPTFGNWEWN+HLPFTQCFE+S++AG+ D  DLYVAGDLYQNDVVTPAMIVVPR   KRDR G Q K++    S P V  H    MPKPV
Subjt:  MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKE---SSGPVVLNHQKPIMPKPV

Query:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI
        DEDLYKISP   CAKPKKKRGLSY+T+CF+PTCLI
Subjt:  DEDLYKISPTLLCAKPKKKRGLSYLTNCFMPTCLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein2.3e-0530.82Show/hide
Query:  EDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRST-GKRDRQGTQ------------------GKKESSG
        + Y  +   IP FG WE    +P TQ FE+ +      A  L +A     +    P  +   R T G ++++G Q                  G K+   
Subjt:  EDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRST-GKRDRQGTQ------------------GKKESSG

Query:  PVVLNHQKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMP
         V L   KP  PKPVDEDLYKI P  + +  +K+R  S+L  C +P
Subjt:  PVVLNHQKPIMPKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMP

AT5G18310.2 unknown protein2.8e-0627.33Show/hide
Query:  EDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGF--------SDAGDLYVAGDLYQNDVVTPAMIVV--PRSTGKRDRQGTQGKKESSGP--------
        + Y  +   IP FG WE    +P TQ FE+ + AG         S A     +     +       +    PR      ++ T G KE  GP        
Subjt:  EDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGF--------SDAGDLYVAGDLYQNDVVTPAMIVV--PRSTGKRDRQGTQGKKESSGP--------

Query:  -------VVLNHQKPIM---------PKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMP
               + +N  K            PKPVDEDLYKI P  + +  +K+R  S+L  C +P
Subjt:  -------VVLNHQKPIM---------PKPVDEDLYKISPTLLCAKPKKKRGLSYLTNCFMP

AT5G48500.1 unknown protein5.0e-2439.49Show/hide
Query:  YSQRTLIPTFGNWEWNEHLPFTQCFESSKV--------AGFSDAGDLYVAGDLYQN-DVVTPAMIVVPRSTGKRDRQGTQGKKESS--------------
        Y +R  +P FG+W+WN+ +PFTQCFE++          A +    DLY+AGDLY N  +V PA+I+VPR   K  ++  + K+  S              
Subjt:  YSQRTLIPTFGNWEWNEHLPFTQCFESSKV--------AGFSDAGDLYVAGDLYQN-DVVTPAMIVVPRSTGKRDRQGTQGKKESS--------------

Query:  ------GPVVLNHQKPIMPKPVDEDLYKISPTLLCAKPKKKR---GLSYLTNCFMPT
               PVV    K   PKPVDEDLYK+SP LL  K K+KR   G   ++ CF+PT
Subjt:  ------GPVVLNHQKPIMPKPVDEDLYKISPTLLCAKPKKKR---GLSYLTNCFMPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTACTACTCGCAGAGGACTTTAATTCCGACGTTTGGAAACTGGGAATGGAACGAGCATCTCCCTTTCACGCAGTGCTTCGAATCTTCCAAAGTCGCCGGATT
TTCCGACGCCGGCGACTTGTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACGCCTGCCATGATCGTCGTTCCCCGCTCCACGGGAAAGCGTGACAGACAGGGGA
CGCAAGGAAAGAAGGAAAGCTCTGGTCCTGTAGTACTGAACCACCAAAAACCAATAATGCCCAAACCTGTTGACGAAGACTTGTACAAAATTTCTCCTACCCTTCTTTGC
GCCAAGCCCAAAAAGAAGAGAGGGCTGAGTTACCTAACAAACTGCTTTATGCCAACATGTTTGATTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCCTCCATTACTCCTCTGTTTTTTATGTCCCCTGCCTCTGTTTTTTTGTTTTTAAAAAACAATAATAATTTTCACCCACTTTGGATCCTTAAAAAAACCCCCAA
AACCCTTTTCTATCCCTCTTTATAACTACTCTTCCTTAACTCCCCAAAACCCATTTCTCATCTTTCTCTTCAACAAATTCTCTTGAAAAAAGCAGCTTCTTCAATGGAGG
ATTACTACTCGCAGAGGACTTTAATTCCGACGTTTGGAAACTGGGAATGGAACGAGCATCTCCCTTTCACGCAGTGCTTCGAATCTTCCAAAGTCGCCGGATTTTCCGAC
GCCGGCGACTTGTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACGCCTGCCATGATCGTCGTTCCCCGCTCCACGGGAAAGCGTGACAGACAGGGGACGCAAGG
AAAGAAGGAAAGCTCTGGTCCTGTAGTACTGAACCACCAAAAACCAATAATGCCCAAACCTGTTGACGAAGACTTGTACAAAATTTCTCCTACCCTTCTTTGCGCCAAGC
CCAAAAAGAAGAGAGGGCTGAGTTACCTAACAAACTGCTTTATGCCAACATGTTTGATTTGAAGAAGAGAAAAGTAACCATCAGCTCAAATGGGATAATCAATCAATGTA
TATTTTTGTCATCACAAATAGACATGCCAAACAGTACATAACCTTTTTGGATGTTTGGTTATTTTATATTAATTAAAAAAAATATTGAGAGTGTTTTTATTTAGAGGGGA
GAATTATTTGTACCAGGGTCTCCCATTGGGTGCTTTTTTTCTTCTTTTCTCTGGTGTAATGAATATTCTAAATTTCTATTTTGTTATGTCCAAGTTTTTTTTTTTTTTTT
ATTAAAAAGACCAACAGCTTGGATTTGTCATTTTTGGATTTGAGTTGGAC
Protein sequenceShow/hide protein sequence
MEDYYSQRTLIPTFGNWEWNEHLPFTQCFESSKVAGFSDAGDLYVAGDLYQNDVVTPAMIVVPRSTGKRDRQGTQGKKESSGPVVLNHQKPIMPKPVDEDLYKISPTLLC
AKPKKKRGLSYLTNCFMPTCLI