; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012262 (gene) of Chayote v1 genome

Gene IDSed0012262
OrganismSechium edule (Chayote v1)
Descriptionhigh mobility group B protein 6-like
Genome locationLG13:5927890..5936501
RNA-Seq ExpressionSed0012262
SyntenySed0012262
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR036910 - High mobility group box domain superfamily
IPR044601 - 3xHMG-box protein HMGB6/HMGB13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015152.1 High mobility group B protein 13 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8055.17Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ+K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL+ITSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

XP_008451961.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]9.8e-7953.77Show/hide
Query:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE
        M TK+T P E EIL QN SSAKK KSKA                EMQDMLQ+LKLD+EKTEELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKE
Subjt:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE

Query:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE
        FKP M           EQDK +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW                  K+ YLRITS+E
Subjt:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE

Query:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG
        KR++EAMK     LL+EE ++ +  +    YLQFKEEAEKENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Subjt:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG

Query:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS
        PYE               +YKQKKEEEAAI+KKEEEEQMK+ KHEALL               K+    +++EGK  VDPNKPKKPASSYILF KEAR S
Subjt:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS

Query:  VMEERDQVCRS
        VMEE+  V  S
Subjt:  VMEERDQVCRS

XP_022931308.1 high mobility group B protein 6-like [Cucurbita moschata]1.2e-7954.68Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ+K +KKKC+E KR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL+ITSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

XP_022985391.1 high mobility group B protein 6-like [Cucurbita maxima]2.6e-7954.68Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EILL QN SSAKKSKSKA                EMQ+MLQ+++LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL++TSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTEEQ  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YK +KEEEAAI+KKEEEEQMKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

XP_023551962.1 high mobility group B protein 6-like [Cucurbita pepo subsp. pepo]1.7e-7854.19Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EI+L +N SSAKK KSKA                EMQDMLQ+L+LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIE KKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ+K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL+ITSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YKQ+KEEEAAI+KKEEEE MKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

TrEMBL top hitse value%identityAlignment
A0A0A0KZT4 Transcription factor6.9e-7850.56Show/hide
Query:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE
        M  K+T P E EIL QN +SAKK KSKA                EMQDMLQ+LKLD+EKTEELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKE
Subjt:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE

Query:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE
        FKP M           EQDK +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW                  K+ YLRITSKE
Subjt:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE

Query:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG
        KR++EAMK     LL+EE ++ +  +    YLQFKEEAEKENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Subjt:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG

Query:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS
        PYE               +Y+QKKEEEAAI+KKEEEEQMK+ KHEALL               K+    +++EGK  VDPNKPKKPASSYILF KEAR S
Subjt:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS

Query:  VMEERDQVCRS--------------------------NGVEGYKKEV
        VMEE+  V  S                            +EGYKKEV
Subjt:  VMEERDQVCRS--------------------------NGVEGYKKEV

A0A1S3BS50 high mobility group B protein 64.7e-7953.77Show/hide
Query:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE
        M TK+T P E EIL QN SSAKK KSKA                EMQDMLQ+LKLD+EKTEELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKE
Subjt:  METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE

Query:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE
        FKP M           EQDK +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW                  K+ YLRITS+E
Subjt:  FKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKE

Query:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG
        KR++EAMK     LL+EE ++ +  +    YLQFKEEAEKENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Subjt:  KRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG

Query:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS
        PYE               +YKQKKEEEAAI+KKEEEEQMK+ KHEALL               K+    +++EGK  VDPNKPKKPASSYILF KEAR S
Subjt:  PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNS

Query:  VMEERDQVCRS
        VMEE+  V  S
Subjt:  VMEERDQVCRS

A0A6J1ETX2 high mobility group B protein 6-like5.6e-8054.68Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ+K +KKKC+E KR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL+ITSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

A0A6J1FQ69 high mobility group B protein 6-like2.0e-7753.2Show/hide
Query:  METKITQPPEKEILLQNLSSAKKSKSK-----------AEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM
        M TK+TQP E+E L QN    K ++ K            EMQDMLQ+L+LD+EKTEELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKEFKPNM
Subjt:  METKITQPPEKEILLQNLSSAKKSKSK-----------AEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM

Query:  ----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTE
                   EQ+K +KKKC+EKKR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL+ITSKEKR+TE
Subjt:  ----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTE

Query:  AMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL
        AMK     LL+EE ++ +  +    YLQFKEEAEK+NK           K  +  FF+ SNERR SLFAENK           EWKNMTEEQ  GPYE +
Subjt:  AMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL

Query:  --------------YKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER
                      YKQKKEEEAA +KKEEEEQMKL KHEALL               K+    +++EGKKNVDPNKPKKPASSYILF KEAR  VMEE+
Subjt:  --------------YKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER

Query:  DQVCRS
          V  S
Subjt:  DQVCRS

A0A6J1J813 high mobility group B protein 6-like1.2e-7954.68Show/hide
Query:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK
        M TK+TQP E+EILL QN SSAKKSKSKA                EMQ+MLQ+++LD+EKTEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLK
Subjt:  METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLK

Query:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK
        EFKP M           EQ K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW                  K+AYL++TSK
Subjt:  EFKPNM----------IEQDKTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSK

Query:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG
        EKR++EAMK     LL+EE ++ +  +    YLQFK EAEKENK           K+ +  FF+ SNERRASL AENK           EWKNMTEEQ  
Subjt:  EKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG

Query:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN
        GPYE               +YK +KEEEAAI+KKEEEEQMKLHKHEALL               K+    +++EGKK+VDPNKPKKPASSYILF KEAR 
Subjt:  GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARN

Query:  SVMEER
        SVMEER
Subjt:  SVMEER

SwissProt top hitse value%identityAlignment
Q9SUP7 High mobility group B protein 62.9e-4939.07Show/hide
Query:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I
        + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE++TRD +QE L++ELKKLQK+KEFKPNM            
Subjt:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I

Query:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM
        EQ+K +KKK   C E KR     + W           +KKENPEA+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     
Subjt:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM

Query:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------
        LL+++ ++ +  +    YL F +EAE++NK            K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Subjt:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------

Query:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER
               YK+ KEEEA   KKEEEE +KLHK EAL           L ++  + +++  +NVDPNKPKKPASSY LF K+ R  + EER
Subjt:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER

Q9T012 High mobility group B protein 131.6e-4741.29Show/hide
Query:  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDKTDKKK---CAEKKR-----L
        K   EMQ ML+++K+++EKTE+LL  KDE+L+ K+ E       QE L+ ELKKLQK+KEFKPNM           E++K  KKK   CAE KR     +
Subjt:  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDKTDKKK---CAEKKR-----L

Query:  CWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEE
         W   +     N +KK+NPEA+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     LL +E ++ +  +    YL F +E
Subjt:  CWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEE

Query:  AEKENKKNA------------LFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE
        AE +NKK A            +  + I +NERRA+L  ENK           EWKN++EE+   PY+ +              YK+ KEEEA   KKEEE
Subjt:  AEKENKKNA------------LFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE

Query:  EQMKLHKHEAL-------------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRS
        E MKLHK EAL              K + +++ ++  +NVDPNKPKKP SSY LFCK+AR SV+EE   +  S
Subjt:  EQMKLHKHEAL-------------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRS

Arabidopsis top hitse value%identityAlignment
AT4G11080.1 HMG (high mobility group) box protein1.1e-4841.29Show/hide
Query:  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDKTDKKK---CAEKKR-----L
        K   EMQ ML+++K+++EKTE+LL  KDE+L+ K+ E       QE L+ ELKKLQK+KEFKPNM           E++K  KKK   CAE KR     +
Subjt:  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDKTDKKK---CAEKKR-----L

Query:  CWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEE
         W   +     N +KK+NPEA+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     LL +E ++ +  +    YL F +E
Subjt:  CWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEE

Query:  AEKENKKNA------------LFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE
        AE +NKK A            +  + I +NERRA+L  ENK           EWKN++EE+   PY+ +              YK+ KEEEA   KKEEE
Subjt:  AEKENKKNA------------LFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE

Query:  EQMKLHKHEAL-------------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRS
        E MKLHK EAL              K + +++ ++  +NVDPNKPKKP SSY LFCK+AR SV+EE   +  S
Subjt:  EQMKLHKHEAL-------------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRS

AT4G23800.1 HMG (high mobility group) box protein2.1e-5039.07Show/hide
Query:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I
        + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE++TRD +QE L++ELKKLQK+KEFKPNM            
Subjt:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I

Query:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM
        EQ+K +KKK   C E KR     + W           +KKENPEA+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     
Subjt:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM

Query:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------
        LL+++ ++ +  +    YL F +EAE++NK            K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Subjt:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------

Query:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER
               YK+ KEEEA   KKEEEE +KLHK EAL           L ++  + +++  +NVDPNKPKKPASSY LF K+ R  + EER
Subjt:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEER

AT4G23800.2 HMG (high mobility group) box protein9.2e-5139.95Show/hide
Query:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I
        + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE++TRD +QE L++ELKKLQK+KEFKPNM            
Subjt:  ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM-----------I

Query:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM
        EQ+K +KKK   C E KR     + W           +KKENPEA+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     
Subjt:  EQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLM

Query:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------
        LL+++ ++ +  +    YL F +EAE++NK            K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Subjt:  LLKEEAERGSCFD----YLQFKEEAEKENK------------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL-------

Query:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL----LKQRTSSR-RREGKKNVDPNKPKKPASSYILFCKEARNSVMEER
               YK+ KEEEA   KKEEEE +KLHK EAL     K++T +  +++  +NVDPNKPKKPASSY LF K+ R  + EER
Subjt:  -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL----LKQRTSSR-RREGKKNVDPNKPKKPASSYILFCKEARNSVMEER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACGAAGATTACGCAGCCACCGGAAAAGGAGATCCTCCTTCAGAATTTATCTTCGGCTAAGAAATCGAAATCCAAAGCGGAAATGCAGGACATGCTTCAACGATT
GAAGCTCGATGAGGAAAAGACGGAGGAGCTTTTGATAGCTAAAGACGAGATGCTTAAGCTGAAGGATGAAGAGATTAAAACGAGAGATCAACAACAGGAGATGCTCCAGA
TCGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGATTGAACAAGATAAGACAGATAAGAAGAAGTGTGCAGAAAAGAAGAGGCTCTGTTGGTTTATG
ACTCACATATTTGTATTAGGGAATTTTATCAAGAAGGAGAATCCAGAGGCAGAGTTCAAGGAAATCTCAAACATTTTAGGGGCAAAATGGAAGAAAGCTTATTTACGGAT
AACTTCTAAAGAGAAACGCAAGACCGAGGCGATGAAGCTGTTATTTCTTATGCTTTTAAAAGAGGAAGCTGAAAGAGGAAGCTGCTTTGATTACCTTCAATTCAAAGAGG
AAGCTGAAAAGGAGAACAAGAAGAATGCTTTGTTCATGTTTTTCATCCTCTCAAACGAGAGGCGTGCATCTCTTTTTGCTGAGAACAAGGAACATCCTAGAGAGTGGAAG
AACATGACTGAGGAGCAGGGAGGAGGTCCTTATGAAGGGTTATACAAGCAGAAAAAGGAGGAGGAAGCAGCTATCATTAAAAAAGAAGAGGAAGAGCAGATGAAGCTTCA
TAAACATGAAGCTTTGTTAAAACAAAGGACGAGCTCAAGAAGAAGGGAAGGGAAGAAGAATGTTGATCCTAACAAGCCCAAGAAGCCTGCATCCTCTTACATCTTATTCT
GCAAAGAAGCAAGGAATAGTGTAATGGAGGAGAGAGACCAGGTCTGCAGAAGCAATGGAGTGGAGGGTTACAAAAAGGAAGTTATTAAAGCAAGTTGGGGGAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACGAAGATTACGCAGCCACCGGAAAAGGAGATCCTCCTTCAGAATTTATCTTCGGCTAAGAAATCGAAATCCAAAGCGGAAATGCAGGACATGCTTCAACGATT
GAAGCTCGATGAGGAAAAGACGGAGGAGCTTTTGATAGCTAAAGACGAGATGCTTAAGCTGAAGGATGAAGAGATTAAAACGAGAGATCAACAACAGGAGATGCTCCAGA
TCGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGATTGAACAAGATAAGACAGATAAGAAGAAGTGTGCAGAAAAGAAGAGGCTCTGTTGGTTTATG
ACTCACATATTTGTATTAGGGAATTTTATCAAGAAGGAGAATCCAGAGGCAGAGTTCAAGGAAATCTCAAACATTTTAGGGGCAAAATGGAAGAAAGCTTATTTACGGAT
AACTTCTAAAGAGAAACGCAAGACCGAGGCGATGAAGCTGTTATTTCTTATGCTTTTAAAAGAGGAAGCTGAAAGAGGAAGCTGCTTTGATTACCTTCAATTCAAAGAGG
AAGCTGAAAAGGAGAACAAGAAGAATGCTTTGTTCATGTTTTTCATCCTCTCAAACGAGAGGCGTGCATCTCTTTTTGCTGAGAACAAGGAACATCCTAGAGAGTGGAAG
AACATGACTGAGGAGCAGGGAGGAGGTCCTTATGAAGGGTTATACAAGCAGAAAAAGGAGGAGGAAGCAGCTATCATTAAAAAAGAAGAGGAAGAGCAGATGAAGCTTCA
TAAACATGAAGCTTTGTTAAAACAAAGGACGAGCTCAAGAAGAAGGGAAGGGAAGAAGAATGTTGATCCTAACAAGCCCAAGAAGCCTGCATCCTCTTACATCTTATTCT
GCAAAGAAGCAAGGAATAGTGTAATGGAGGAGAGAGACCAGGTCTGCAGAAGCAATGGAGTGGAGGGTTACAAAAAGGAAGTTATTAAAGCAAGTTGGGGGAAAGCTTGA
Protein sequenceShow/hide protein sequence
METKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNMIEQDKTDKKKCAEKKRLCWFM
THIFVLGNFIKKENPEAEFKEISNILGAKWKKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFDYLQFKEEAEKENKKNALFMFFILSNERRASLFAENKEHPREWK
NMTEEQGGGPYEGLYKQKKEEEAAIIKKEEEEQMKLHKHEALLKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRSNGVEGYKKEVIKASWGKA