CuGenDBv2

Gene ID	Sed0012265
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG12:31934261..31935556
RNA-Seq Expression	Sed0012265
Synteny	Sed0012265
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]

6.7e-40

67.81

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+  VRH S   D K DA + RRQFAEVAGGSAAECTAVCCCCP TVLNI IF++YRMPAGLCRKAI+RRK HRRMK KYLI QR A + DF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS
        + G +G  +DSF  H    D AD E+L KL+EEMW RF+QTGF R+
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]

8.0e-41

68.46

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS   +RH S   D K DA R RRQFAEVAGGSAAECTAVCCCCP TVLNI IF +YRMPAGLCRKAI+RRK HRRMK KYLI QR AASEDF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ
        + G +G  +D +  H  A D A  E+L KL++EMW RF+QTGF RS SQ
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]

1.2e-39

67.81

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+  VRH S   D K DA + RRQFAEVAGGSAAECTAVCCCCP TVLNI IF +YRMPAGLCRKAI+RRK HRRMK KYLI QR A + DF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS
        + G +G  +DSF  H    D AD E+L KL+EEMW RF+QTGF R+
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS

XP_022933995.1 uncharacterized protein LOC111441234 [Cucurbita moschata]

1.1e-37

61.07

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+ I R  S    EK+DA R +RQFAE+AGGSAA+CT +CCCCP TV+N+ IF VYRMP GLCRKA++RRK HRR+K K LI QR AAS++F
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ
            +  +++SFEA   A D A  E++ KL+EEMW RFNQTGF RS SQ
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]

6.5e-43

69.39

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Query:  MNRKVLLRSENIVRHESDEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDFSYG
        M RKVLLRS   +RHESDEK DA + RRQFAEVAGGSAAECTA+CCCCP TV+NI IF VYRMPAGLCRKA++RRK HR+MK K LI QR A S DF+ G
Subjt:  MNRKVLLRSENIVRHESDEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDFSYG

Query:  PMG-LSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ
         +G   M+S EAH    D AD+E+L KL+EEMW RFNQTGF RS SQ
Subjt:  PMG-LSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV48 Uncharacterized protein

3.9e-41

68.46

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS   +RH S   D K DA R RRQFAEVAGGSAAECTAVCCCCP TVLNI IF +YRMPAGLCRKAI+RRK HRRMK KYLI QR AASEDF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ
        + G +G  +D +  H  A D A  E+L KL++EMW RF+QTGF RS SQ
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

A0A5A7UQK6 Uncharacterized protein

3.3e-40

67.81

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+  VRH S   D K DA + RRQFAEVAGGSAAECTAVCCCCP TVLNI IF++YRMPAGLCRKAI+RRK HRRMK KYLI QR A + DF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS
        + G +G  +DSF  H    D AD E+L KL+EEMW RF+QTGF R+
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS

A0A5D3DY75 Uncharacterized protein

5.6e-40

67.81

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+  VRH S   D K DA + RRQFAEVAGGSAAECTAVCCCCP TVLNI IF +YRMPAGLCRKAI+RRK HRRMK KYLI QR A + DF
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS
        + G +G  +DSF  H    D AD E+L KL+EEMW RF+QTGF R+
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRS

A0A6J1BZB0 uncharacterized protein LOC111006972

4.6e-34

57.42

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQ-RAASEDF
        M  KVLLRS  I  ++S   DEK DA R RRQFAEVAGGSAAECTA+CCCCPLTV+NI IF +Y+MPAGLCRKA+  RK H +MK K LI Q R AS++F
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQ-RAASEDF

Query:  ---SYGPMGL-SMDSFEAHIPAFDDA--DLEELIKLDEEMWDRFNQTGFLRSPSQ
           S GP G+   D     +P  +      ++LI L+EEMW +F+QTGF RS SQ
Subjt:  ---SYGPMGL-SMDSFEAHIPAFDDA--DLEELIKLDEEMWDRFNQTGFLRSPSQ

A0A6J1F6E1 uncharacterized protein LOC111441234

5.2e-38

61.07

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Query:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF
        M RKVLLRS+ I R  S    EK+DA R +RQFAE+AGGSAA+CT +CCCCP TV+N+ IF VYRMP GLCRKA++RRK HRR+K K LI QR AAS++F
Subjt:  MNRKVLLRSENIVRHES---DEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQR-AASEDF

Query:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ
            +  +++SFEA   A D A  E++ KL+EEMW RFNQTGF RS SQ
Subjt:  SYGPMGLSMDSFEAHIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G27180.1 unknown protein

7.0e-19

36.71

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Query:  MNRKVLLRS-------ENIVRHESDEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKY-LIHQRAA
        M R V+L+S       E+ +R+     T   + RR+  EVAGG+AAEC AV CCCP  V+N+ +  VY++PA +C+KA  R K  R  + ++ L+    A
Subjt:  MNRKVLLRS-------ENIVRHESDEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKY-LIHQRAA

Query:  SEDFSYGPMGLSMDSFEAHIPAFDD-----ADLEELIKLDEEMWDRFNQTGFLRSPSQ
            S     L+ +   A I  F++      +L ++++L+ EM DRF   GF RSPSQ
Subjt:  SEDFSYGPMGLSMDSFEAHIPAFDD-----ADLEELIKLDEEMWDRFNQTGFLRSPSQ

AT3G11690.1 unknown protein

9.8e-13

30.34

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Query:  AEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYL-----------IHQRAASEDFSYGPMGLSMDSFEAHIPAF----
        AE  GG+ A C AV CCCP  ++N+ +  +Y++P G+CR+AI  R+  + +KN  L           + +   + +F+  P+     S +     F    
Subjt:  AEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYL-----------IHQRAASEDFSYGPMGLSMDSFEAHIPAF----

Query:  ---------------DDADLEELIKLDEEMWDRFNQTGFLRSPSQ
                        D D E ++ L++EMW+RF   GF RSPSQ
Subjt:  ---------------DDADLEELIKLDEEMWDRFNQTGFLRSPSQ

AT5G06380.1 unknown protein

5.2e-14

37.82

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Query:  AEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYL----IHQRAASEDFSYGPMGLSMDSFEAHIPAFDDADLEELIKL
        AE  GG+ A C A+C C P +V+N+ +  VY++P GLCR+AI R +  R  K +++       R  S  F+  P+  S D  E      ++ + E +I L
Subjt:  AEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYL----IHQRAASEDFSYGPMGLSMDSFEAHIPAFDDADLEELIKL

Query:  DEEMWDRFNQTGFLRSPSQ
        ++EMW RF   GF RS SQ
Subjt:  DEEMWDRFNQTGFLRSPSQ

Sequences

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CDS sequence

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ATGAATCGGAAGGTCCTTCTCCGATCTGAGAACATCGTCCGTCACGAATCCGACGAGAAAACCGATGCGCGGAGATCGCGGCGGCAGTTCGCGGAGGTGGCCGGAGGATC
CGCGGCGGAATGCACGGCGGTTTGCTGCTGCTGTCCGTTGACGGTGCTGAACATCGCGATCTTCACCGTGTACCGGATGCCGGCGGGACTCTGCCGGAAGGCGATCCACC
GGAGAAAACATCACCGGAGAATGAAGAACAAGTATCTCATTCACCAAAGGGCCGCCTCTGAGGATTTCTCGTATGGGCCGATGGGCCTCTCGATGGACAGTTTCGAGGCC
CATATACCGGCCTTCGACGATGCTGACTTGGAAGAGTTGATCAAGTTGGATGAGGAAATGTGGGACCGGTTCAATCAGACCGGCTTTTTGAGAAGTCCTTCTCAATGA

mRNA sequence

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CTTCGTTCATGTTTCCTCCCTTGCAACAACGACTTAGCCCTGCGCGCTTTTCGAAACCCTTCGATCATCTGATCTTCTCTCTCAACTGTGCAATCCATCCATTTTCCCGT
CTCTTTCGCCATTTCCATGGAGATTACTCAATTCCCTCTTCTTTATCTCCCTCTCATCTCATCCTCCACCTTCCATTCGCGCCTAATTCCTTTTTCCAACGCCGCCGGAA
TCGCTTTCTTTTTCTCCGATTCCGTTCAGATCTCGGCGGCGACGCTTCTCCCGGTCGGAATACATTTCTCCCCTGCGGATCCGATTCATTAATCAATTCATTCATTCAGA
TCTCCGGTTCGATTGTGTTTCTGTTCTCCCTACGGACGGCGGTTCGATTCTCTCCCATCGGAACAAATTTCTCCGAAAACGGTTGAAATCGTTGCGGTTGCCGTTCGATT
CTCTCAAAAAATCGTGCGGATCCGATTAATTAATCGATTCATTCACTCAGATCTCCGATTCGGTTGTGCTTCTGTTCTCCGTACCGACGGCCGTTCGATTCTCTCTGATC
GGAACAAATTTCTCCGAAGCGGTGAAATCACCTCCGATTCCGTTGAAATCGTTGCGGTCGCCGTTCGATTCTCTCGGAAAACCGTGCGGATCCGATTAATTCCTCCGATT
CGGTTCTGTTTATATTTGTTCTTCATGAATCGGAAGGTCCTTCTCCGATCTGAGAACATCGTCCGTCACGAATCCGACGAGAAAACCGATGCGCGGAGATCGCGGCGGCA
GTTCGCGGAGGTGGCCGGAGGATCCGCGGCGGAATGCACGGCGGTTTGCTGCTGCTGTCCGTTGACGGTGCTGAACATCGCGATCTTCACCGTGTACCGGATGCCGGCGG
GACTCTGCCGGAAGGCGATCCACCGGAGAAAACATCACCGGAGAATGAAGAACAAGTATCTCATTCACCAAAGGGCCGCCTCTGAGGATTTCTCGTATGGGCCGATGGGC
CTCTCGATGGACAGTTTCGAGGCCCATATACCGGCCTTCGACGATGCTGACTTGGAAGAGTTGATCAAGTTGGATGAGGAAATGTGGGACCGGTTCAATCAGACCGGCTT
TTTGAGAAGTCCTTCTCAATGAGACGCGAGTAAATAAAAATATATTAACACACACACACAAATGTTTATGATTTTTTTTTTTTTTCGATAAAAGATTTTCATGAGCGTTC
GAATCCAACTCTAAATCTTTTGATTTAGTAGTTGTGATTGGAAAATTTAGCTACGTGAAAGTGTAATATTTACAAGCATTTTAAAC

Protein sequence

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MNRKVLLRSENIVRHESDEKTDARRSRRQFAEVAGGSAAECTAVCCCCPLTVLNIAIFTVYRMPAGLCRKAIHRRKHHRRMKNKYLIHQRAASEDFSYGPMGLSMDSFEA
HIPAFDDADLEELIKLDEEMWDRFNQTGFLRSPSQ

Sed0012265 (gene) of Chayote v1 genome