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Sed0012287 (gene) of Chayote v1 genome

Gene IDSed0012287
OrganismSechium edule (Chayote v1)
Descriptionzinc finger CCCH domain-containing protein 15 homolog
Genome locationLG01:31933420..31935739
RNA-Seq ExpressionSed0012287
SyntenySed0012287
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR032378 - ZC3H15/TMA46 family, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]1.6e-3088.89Show/hide
Query:  MGAEE-AAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AAAME+EK  SHNPRTNPIT AQFLSWKRQKDAEASAKRDET+RKR EDIA+G VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE-AAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]7.3e-2885Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AAME+EK AS NPRT PIT  QFLSWKRQKDAEASAKRDET+RKR +DIASG VQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
XP_022963450.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]3.6e-2782.5Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE A +E EK +SH+P  NPIT AQFLSWKR KDAEASAKRDET+RKR EDIASG VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
XP_022990599.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]3.3e-2885Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AA+E+EK ASH+P  NPIT AQFLSWKR KDAEASAKRDET+RKR EDIASG VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
XP_038906768.1 zinc finger CCCH domain-containing protein 15 homolog [Benincasa hispida]3.3e-2886.25Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAE   A E+EK ASHNPRT PIT AQFLSWKRQKDAEASAKRDET+RKR EDIASG VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
TrEMBL top hitse value%identityAlignment
A0A0A0KN87 DFRP_C domain-containing protein3.0e-2780Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEEAA  +E+  +SHNPRT PIT AQFLSWKR+KDAEASAKR+ET+RKR EDIA G VQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog7.6e-3188.89Show/hide
Query:  MGAEE-AAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AAAME+EK  SHNPRTNPIT AQFLSWKRQKDAEASAKRDET+RKR EDIA+G VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE-AAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog3.5e-2885Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AAME+EK AS NPRT PIT  QFLSWKRQKDAEASAKRDET+RKR +DIASG VQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
A0A6J1HI11 zinc finger CCCH domain-containing protein 15 homolog1.7e-2782.5Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE A +E EK +SH+P  NPIT AQFLSWKR KDAEASAKRDET+RKR EDIASG VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog1.6e-2885Show/hide
Query:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        MGAEE AA+E+EK ASH+P  NPIT AQFLSWKR KDAEASAKRDET+RKR EDIASG VQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22140.1 unknown protein4.7e-1766.13Show/hide
Query:  PRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
        P    I+  QFL+WKRQKDAE  AK+ E +RKR EDIASG V MNGRELFLH+PWVFD+T +
Subjt:  PRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY
AT1G22140.2 unknown protein6.4e-0662.5Show/hide
Query:  PRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASG
        P    I+  QFL+WKRQKDAE  AK+ E +RKR EDIASG
Subjt:  PRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGCAGAAGAAGCAGCAGCCATGGAAGAAGAGAAGCCTGCATCTCATAATCCAAGGACGAATCCCATCACCGCAGCTCAGTTCCTTTCATGGAAGCGCCAGAAGGA
TGCCGAGGCATCTGCTAAAAGAGATGAAACATCAAGGAAGCGTGTGGAGGATATAGCCTCAGGAGTGGTGCAAATGAACGGCCGAGAGCTTTTCTTGCACCAACCATGGG
TCTTTGATAATACTCAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGCAGAAGAAGCAGCAGCCATGGAAGAAGAGAAGCCTGCATCTCATAATCCAAGGACGAATCCCATCACCGCAGCTCAGTTCCTTTCATGGAAGCGCCAGAAGGA
TGCCGAGGCATCTGCTAAAAGAGATGAAACATCAAGGAAGCGTGTGGAGGATATAGCCTCAGGAGTGGTGCAAATGAACGGCCGAGAGCTTTTCTTGCACCAACCATGGG
TCTTTGATAATACTCAATATTGA
Protein sequenceShow/hide protein sequence
MGAEEAAAMEEEKPASHNPRTNPITAAQFLSWKRQKDAEASAKRDETSRKRVEDIASGVVQMNGRELFLHQPWVFDNTQY