| GenBank top hits | e value | %identity | Alignment |
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| KAA3462561.1 reverse transcriptase [Gossypium australe] | 1.4e-64 | 47.83 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFT--AQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
+A+Q K+RN I +L GR + E+ +A++YF LF+ +QP D L I CV + N+ L SFT+ EI AL M P+KAPG DG A
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFT--AQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
Query: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
+F+Q W I+G+EV +CL LN+G+D+ +NKT I L+PKV PS + +FRPISLCN +YK+IAK +ANRL+ ++ K I +QSAFVPGRLI+DNV++
Subjt: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
Query: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
+E +H+++ +KTGK+G A+KLDMSKA+DRV+W+F+ +M+K+GF + W+ V
Subjt: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| XP_012461392.1 PREDICTED: uncharacterized protein LOC105781396 [Gossypium raimondii] | 6.4e-65 | 50.6 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
+ASQ +K+N I +L D GR +I VAK+YF NLF+A R +G D IL+ + R I+ + R+L + ++R EI A+ M P+KAPG DG ALF
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
Query: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
+Q W IVGD+V+ FCL +LN ++I P+N T I LIPKV PS M +FRPISLCN +YKIIAK +ANR + ++ K I QSAFVPGRLI+DNV++ +E
Subjt: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
Query: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
+H +K+++TGK+G+ A+KLDMSKAYDRVEW + +M K+GF +W+ +
Subjt: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber] | 1.8e-67 | 50.99 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQ--PRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
+AS ++RN I+ ++D G W IA+VA +YF ++++ R+ LD I V ++N L + FTR EIE AL M+P+KAPGPDG +A
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQ--PRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
Query: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
+FFQ YW+IVG+++V L VLN + + +NKT I L+PK++ P+KM +FRPISLCN VYK+I+K +ANRLK IL +IIS NQSAF+ GRLITDNV++
Subjt: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
Query: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
FE +H ++ +K GK+G+AA+KLDMSKAYDRVEW F+ +M+K+GF + WIK V
Subjt: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber] | 7.6e-66 | 50 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
RAS+ +K+N I RL + G WC I+ A +YF N++T+ ++ ++ + R++ EL K+FT E+ ALK ++P+KAPGPDG +A F
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
Query: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
F NYWDIVG + L+VLN L + +NKT I+LIPK P +M EFRPISLCNT YKII+K +ANR K IL IIS NQSAF P RLITDNV++ FE
Subjt: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
Query: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWI
+H + + GK+ + ++KLDMSKA+DRVEWSF+ G+M+KLGF + WI
Subjt: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWI
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| XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber] | 1.2e-66 | 52.36 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVN---RKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTN
+ASQ ++RN I + G W EIA VA YF NLF A G D++ C+N RK+ L F E++LAL M P+KAPGPDG N
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVN---RKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTN
Query: ALFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVI
ALF+Q +W +VGD VV L LN+G +N T+I LIPKV+ P KM +FRPISLCN +YKII+K + NRLK +L IISP QSAFVPGRLITDNV++
Subjt: ALFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVI
Query: GFECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
+E +H++ RK GK+G+ ALKLD+SKAYDRVEW FL G+M +LGF + WI++V
Subjt: GFECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9EX83 Reverse transcriptase domain-containing protein | 2.0e-64 | 51.76 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLF-TAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNAL
+A+ K+RN I + D G W E+ Y+ +LF T+QP G D IL+ V+R I I ++LD FT E+E AL M P KAPGPDG +
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLF-TAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNAL
Query: FFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
F+Q YW+IVG +V LS L DG + +N T I LIPKVQ P +++FRPISLCN +YKIIAK +ANRLK IL IIS +QSAFVPGRLI+DN++I F
Subjt: FFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
Query: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV-EC
E +H +K K KQG+ ALKLDMSKAYDRVEW+FL +M +GFS++W+ + EC
Subjt: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV-EC
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| A0A2N9I475 Reverse transcriptase domain-containing protein | 3.4e-64 | 50.39 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
+A+Q ++ N + L + WC + +I +A +YF ++F V+ L+ L VN ++ + L + FT E+ +AL M+PSKAPGPDG ++ F
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
Query: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
FQ YW+IVG +VV LSVLN G + +N T I+LIPK + P +M E+RPISLCN VYKII+K +ANRLK+IL IIS +QSAFVPGRLITDNV + FE
Subjt: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
Query: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIK-KVEC
IH +K ++ GK+G A+KLDMSKAYDRVEW+F+ G+M KLGF++ WI +EC
Subjt: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIK-KVEC
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| A0A2N9J6Y2 Uncharacterized protein | 5.3e-65 | 52.16 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLF-TAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNAL
+A+ K+RN I + D FG W RD ++ Y+ LF T+QP G D IL V+R + +LD FT E+E A+K M P KAPGPDG
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLF-TAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNAL
Query: FFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
F+Q YW IVG++V LS L DG + +N T I LIPKVQ P M+++RPISLCN VYKIIAK +ANRLK IL IIS +QSAFVPGRLI+DN++I F
Subjt: FFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
Query: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV-EC
E +H +K K G+QG+ ALKLDMSKAYDRVEW+FL +M K+GF+ +W+ + EC
Subjt: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV-EC
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| A0A5B6V0I7 Reverse transcriptase | 6.9e-65 | 47.83 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFT--AQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
+A+Q K+RN I +L GR + E+ +A++YF LF+ +QP D L I CV + N+ L SFT+ EI AL M P+KAPG DG A
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFT--AQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNA
Query: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
+F+Q W I+G+EV +CL LN+G+D+ +NKT I L+PKV PS + +FRPISLCN +YK+IAK +ANRL+ ++ K I +QSAFVPGRLI+DNV++
Subjt: LFFQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIG
Query: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
+E +H+++ +KTGK+G A+KLDMSKA+DRV+W+F+ +M+K+GF + W+ V
Subjt: FECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| A0A803PMD0 Uncharacterized protein | 6.3e-66 | 48.21 | Show/hide |
Query: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
+ASQ KK+N I L D RWC D+E+ + YF+NLF+A R ++ + CV +++ E L + FT+ E++ A+ ++P KAPG DG LF
Subjt: RASQHKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
Query: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
+ +W VG EV+ CL VLN +D G +N T + LIPKV+ P K+EEFRP+SLCN VYK+I+K +ANR+K+ ++K+IS NQSAF+ GR I DN ++GFE
Subjt: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFE
Query: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
+H +KK + G ALKLDMSKAYDRV+W FL GMM LG+ WI+K+
Subjt: CIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKV
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 2.8e-23 | 27.56 | Show/hide |
Query: KKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVN-RKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNY
+++N+ID + + G EI + Y+ +L+ + +D L ++N E L++ T EI + S+ K+PGPDG A F+Q Y
Subjt: KKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQPRVDGALDRILACVN-RKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNY
Query: WDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKV-QIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIH
+ + ++K S+ +G+ + I LIPK + +K E FRPISL N KI+ K +ANR++ + K+I +Q F+PG N+ I
Subjt: WDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKV-QIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIH
Query: SIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
I + K + + +D KA+D+++ F+L ++KLG ++K + + +
Subjt: SIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
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| P08548 LINE-1 reverse transcriptase homolog | 1.0e-20 | 27.85 | Show/hide |
Query: EIARVAKNYFTNLFTAQPRVDGALDRIL-ACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNYWDIVGDEVVKFCLSVLNDGLD
EI ++ Y+ L++ + +D+ L AC +++ E L++ + EI ++++ K+PGPDG + F+Q + +E+V L++ +
Subjt: EIARVAKNYFTNLFTAQPRVDGALDRIL-ACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNYWDIVGDEVVKFCLSVLNDGLD
Query: IGPVNKTF----IALIPKV-QIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIHSIKKRKTGKQGWAALKL
G + TF I LIPK + P++ E +RPISL N KI+ K + NR++ + KII +Q F+PG N+ I I K K + L +
Subjt: IGPVNKTF----IALIPKV-QIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIHSIKKRKTGKQGWAALKL
Query: DMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
D KA+D ++ F++ + K+G ++K +E + +
Subjt: DMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.4e-22 | 27.13 | Show/hide |
Query: HKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQ----PRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
H+ + I+++ + G EI ++++ L++ + +D LDR K+N + L+ + EIE + S+ K+PGPDG +A F
Subjt: HKKRNRIDRLLDPFGRWCCRDVEIARVAKNYFTNLFTAQ----PRVDGALDRILACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALF
Query: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQ-IPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
+Q + + + + K + +G + I LIPK Q P+K+E FRPISL N KI+ K +ANR++ + II P+Q F+PG N+
Subjt: FQNYWDIVGDEVVKFCLSVLNDGLDIGPVNKTFIALIPKVQ-IPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGF
Query: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
IH I K K + + LD KA+D+++ F++ ++++ G ++ ++ + +
Subjt: ECIHSIKKRKTGKQGWAALKLDMSKAYDRVEWSFLLGMMDKLGFSQNWIKKVECAFPR
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.8e-25 | 32.73 | Show/hide |
Query: AKNYFTNLFTAQPRVDGALDRI---LACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNYWDIVGDEVVKFCLSVLNDGLDIGP
A++++ NLF+ P A + + L V+ + L+ T E+ AL+ M +K+PG DG FFQ +WD +G + + G
Subjt: AKNYFTNLFTAQPRVDGALDRI---LACVNRKINITEARELDKSFTRVEIELALKSMNPSKAPGPDGTNALFFQNYWDIVGDEVVKFCLSVLNDGLDIGP
Query: VNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIHSIKKRKTGKQGWAALKLDMSKAYDR
+ ++L+PK ++ +RP+SL +T YKI+AKA++ RLK +L ++I P+QS VPGR I DNV + + +H R+TG A L LD KA+DR
Subjt: VNKTFIALIPKVQIPSKMEEFRPISLCNTVYKIIAKAMANRLKIILDKIISPNQSAFVPGRLITDNVVIGFECIHSIKKRKTGKQGWAALKLDMSKAYDR
Query: VEWSFLLGMMDKLGFSQNWI
V+ +L+G + F ++
Subjt: VEWSFLLGMMDKLGFSQNWI
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