CuGenDBv2

Gene ID	Sed0012289
Organism	Sechium edule (Chayote v1)
Description	EF-hand domain-containing protein
Genome location	LG02:51292681..51296288
RNA-Seq Expression	Sed0012289
Synteny	Sed0012289
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function) GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022146952.1 uncharacterized protein LOC111016024 [Momordica charantia]

1.4e-52

71.78

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ L +  GK+WRD +++KISD+IFNKI   S+K  LSFEDLYIATLLVYNEINK LPGPH DPPSKE +RELI+ESD + D EIDREEF  FIL LTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQG
        DT I VSQ LVLTLVVAPTVAV TK STEG+P +GKLVQ LP SVYA L+T+AA+ FQN+ QG
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQG

XP_022924303.1 uncharacterized protein LOC111431834 [Cucurbita moschata]

4.5e-48

67.27

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        M + LGRF GKEWRDE+L+ ISDRIF+ I    +K++LSFEDLYIATLLVYN+INK LP  HLDPP++E  RELI+E+D + D +I R+EF  FILSLTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        D FI +S  L+LTLV+APTVAV TK STEGIPVIG LVQ LP S YAFLVT+AA +FQNSQ+ +L
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

XP_023528258.1 uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo]

5.9e-48

66.67

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        M + LGRF GKEWRDE+L+ ISDRIF+ I    +K++LSFEDLYIATLLVYN+INK LP  HLDPP++E  RELI+E+D + D +I R+EF  FILSLTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        D FI +S  L+LTLV+APTVAV TK STEGIPV+G LVQ LP S YAFLVT+AA +FQNSQ+ +L
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

XP_023540969.1 uncharacterized protein LOC111801195 [Cucurbita pepo subsp. pepo]

6.3e-50

66.67

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ LGRF GKEWR ++LK ISDRIF+KI KQS+KE LSFE+LYIATLLV+N+INKLL G H DPPS+EH ++LI+E D + + +ID EEFF F++ LTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        +TF  VSQ LVLTLV+APT+AV TK  TEG+P +GKLVQ LP S YA ++T+AAV+FQ+SQQ LL
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

XP_038876686.1 uncharacterized protein LOC120069050 [Benincasa hispida]

2.8e-58

73.94

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ+LGRF GKEWRDE+L+KIS++IF+K   QS +++LSFEDLYIATLLVYN+INK +PGPHLDPP+KE ++ELIQ+SD D D EIDREEF  FILSLTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        DTF+ VSQ L+LTLVVAPTVAV TK STEG+P +GK VQ LP S YAFLVT+AA+MFQNSQQ LL
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1A5X4 uncharacterized protein LOC110415261

1.1e-47

62.2

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ L +F GKEWR ++++KISD++F +I  QS +  L+FEDLYI+ LLVYN+INK LPGPH DPPSKE +R ++QE D + D EIDREEF  FI  LT+
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGL
        DTFI+VSQ L++TLVVAPTVA+ATK +TEG+P +GK+VQ LP+S+YA LVT+A V FQ S++G+
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGL

A0A6J1D109 uncharacterized protein LOC111016024

6.6e-53

71.78

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ L +  GK+WRD +++KISD+IFNKI   S+K  LSFEDLYIATLLVYNEINK LPGPH DPPSKE +RELI+ESD + D EIDREEF  FIL LTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQG
        DT I VSQ LVLTLVVAPTVAV TK STEG+P +GKLVQ LP SVYA L+T+AA+ FQN+ QG
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQG

A0A6J1EC16 uncharacterized protein LOC111431834

2.2e-48

67.27

Show/hide

Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        M + LGRF GKEWRDE+L+ ISDRIF+ I    +K++LSFEDLYIATLLVYN+INK LP  HLDPP++E  RELI+E+D + D +I R+EF  FILSLTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        D FI +S  L+LTLV+APTVAV TK STEGIPVIG LVQ LP S YAFLVT+AA +FQNSQ+ +L
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

A0A6J1IGT6 uncharacterized protein LOC111472754

8.3e-48

64.24

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ LGRF GK+WR ++LK IS+RIF+KI KQS+KE LSFE+LYIATLLV+N+INKLL G H DPPS+EH ++LI   D++ + +ID EEFF F++ LTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        +TF  VSQ LVLTLV+APT+AV TK  TEG P +GKLVQ LP S YA ++T+AAV+FQ+S Q LL
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

A0A6J1ITL1 uncharacterized protein LOC111479803

1.4e-47

65.45

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        M + LGRF GKEWRDE+L+ ISDRIF+ I    +K++LSFEDLYIATLLVYN+INK LP  HLDPP++E  R+L++E+D + D +I R+EF  FILSLTS
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL
        D FI +S  L+LTLV+APTVAV TK STEGIPV+G LVQ LP S YAFLVT+AA +FQNSQ+ +L
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64850.1 Calcium-binding EF hand family protein

1.5e-41

53.75

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS
        MGQ   +  GKEWR ++++ I DR+F++   Q+ +  L+FE+LYIA LLVYN+INK LPGPH DPPSK+ +  ++ + D + D E+DREEF  FI  +T+
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTS

Query:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNS
        +TF +VSQ L++ L+VAPTVA+ATK +TEG+P +GK+VQ LP S+YA LVT+ AVM+ NS
Subjt:  DTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNS

AT4G37445.1 BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1)

1.4e-07

26.75

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Query:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQ-SEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLT
        MG ++G FLGK     ++  +   +   + KQ ++K   +F+D ++A L ++N  N  LPG H D P+ + I+          D E  ++ F  F+    
Subjt:  MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQ-SEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLT

Query:  SDTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVM
          +   +    ++T +V+P  A+A K + E +P + KL++ +PD ++   VT+ A++
Subjt:  SDTFILVSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGACAAACCTTGGGGAGATTCTTAGGAAAAGAATGGAGGGATGAGCGATTGAAGAAGATATCAGACAGGATATTTAATAAGATTATAAAACAATCGGAAAAA
GAGAGGCTGTCATTTGAAGATTTGTATATCGCTACGTTACTTGTGTACAATGAGATTAATAAGCTGTTGCCCGGCCCACATCTTGATCCGCCCTCGAAGGAACAT
ATCAGAGAACTTATCCAGGAAAGCGATACGGACAGCGACCTAGAAATTGATCGCGAAGAATTTTTTAGTTTTATACTGAGCTTGACATCGGACACGTTCATATTG
GTGAGCCAGACGTTGGTTCTCACTTTGGTGGTTGCACCGACGGTGGCAGTGGCGACAAAGACGAGCACAGAAGGCATTCCGGTCATTGGAAAATTGGTGCAGACA
CTGCCTGATTCAGTTTATGCTTTCCTAGTCACTGTTGCTGCTGTGATGTTCCAAAACTCTCAGCAGGGGCTTCTTAATTGA

mRNA sequence

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GTCCGTATGAGACAAAACCAAGCAAATGTATAACATAACTTGCATTCAAGGAAAGCTGAGGTCCCTTTATTCCAAACTGGAAAAGGAAATGTGTGTATGAATTTG
ATCACTTTTTCTTTTACAAAACCCTCCAGAAATGGCAGATTTCGTTATCGTTGCTGCTACGCCGGAAATCTCAACCTTCCTCTGCCGGAGAACGGATTTCAACCG
CTGTCGGCGGCTGTTTTGCGAGGCCTGCGATCTCAAATCGCCGTCGGTGCCGTTTAAGCATGGGACAAACCTTGGGGAGATTCTTAGGAAAAGAATGGAGGGATG
AGCGATTGAAGAAGATATCAGACAGGATATTTAATAAGATTATAAAACAATCGGAAAAAGAGAGGCTGTCATTTGAAGATTTGTATATCGCTACGTTACTTGTGT
ACAATGAGATTAATAAGCTGTTGCCCGGCCCACATCTTGATCCGCCCTCGAAGGAACATATCAGAGAACTTATCCAGGAAAGCGATACGGACAGCGACCTAGAAA
TTGATCGCGAAGAATTTTTTAGTTTTATACTGAGCTTGACATCGGACACGTTCATATTGGTGAGCCAGACGTTGGTTCTCACTTTGGTGGTTGCACCGACGGTGG
CAGTGGCGACAAAGACGAGCACAGAAGGCATTCCGGTCATTGGAAAATTGGTGCAGACACTGCCTGATTCAGTTTATGCTTTCCTAGTCACTGTTGCTGCTGTGA
TGTTCCAAAACTCTCAGCAGGGGCTTCTTAATTGATGAGTTCGTCATCTGTTTCATTTCTTTGTTGTTTCCATGCAATGTGATTCTGGACATATTAACACTTGAA
ACTTTGAATCTACTATTTGTGAAGCCTTGTTTGTTGAACTTTGTTTCTGTGGCTGTTTATCTTTTTCTTTCCTTTCATGGAGGCCCTCTCTTTCAAACTGATAGG
ACCAGGGTTGATAGATTTCAACTTCAGAACAAATCTGAACTGATGGTAGTTTTTTTTTTAGATTACAATAATTGGG

Protein sequence

Show/hide protein sequence

MGQTLGRFLGKEWRDERLKKISDRIFNKIIKQSEKERLSFEDLYIATLLVYNEINKLLPGPHLDPPSKEHIRELIQESDTDSDLEIDREEFFSFILSLTSDTFIL
VSQTLVLTLVVAPTVAVATKTSTEGIPVIGKLVQTLPDSVYAFLVTVAAVMFQNSQQGLLN

Sed0012289 (gene) of Chayote v1 genome