; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012301 (gene) of Chayote v1 genome

Gene IDSed0012301
OrganismSechium edule (Chayote v1)
Descriptionprotein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Genome locationLG02:40378409..40382259
RNA-Seq ExpressionSed0012301
SyntenySed0012301
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014012 - Helicase/SANT-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596234.1 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-9176.89Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

XP_022940291.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucurbita moschata]4.3e-9176.89Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

XP_022971248.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucurbita maxima]2.2e-9076.49Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPS ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

XP_023539725.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucurbita pepo subsp. pepo]4.3e-9176.89Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

XP_038904045.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Benincasa hispida]8.2e-9076.1Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG R KLDHETR KRQK LE  RE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ+NST+EPHN H QE+DE +AVEP ELNV HESDS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RS+DESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRY GEK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

TrEMBL top hitse value%identityAlignment
A0A0A0LBB6 Uncharacterized protein1.7e-8874.5Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        M SKG R KLDHE+R KRQK LE  +E +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKH+ ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ+NSTNEPHNAH QE+DE KAVEP ELNV HESDS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
         S+DESEDNE+TIDEDEALIT+EERQEEL+ALQNEVDLPLEELLKRY+GEK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

A0A1S4DUM1 LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 12.2e-8874.5Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        M SKG R KLDHE+R KRQK LE  RE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQ+ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ+NSTNEPHN H QE+DE KAVEP ELNV HESDS +FDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
         S+DESEDNE+TIDEDEALIT+EERQEEL+ALQNEVDLPLEELLKRY+GEK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

A0A5A7TNS3 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 12.2e-8874.5Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        M SKG R KLDHE+R KRQK LE  RE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQ+ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ+NSTNEPHN H QE+DE KAVEP ELNV HESDS +FDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
         S+DESEDNE+TIDEDEALIT+EERQEEL+ALQNEVDLPLEELLKRY+GEK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

A0A6J1FNW1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 12.1e-9176.89Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPSQ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

A0A6J1I6A5 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 11.0e-9076.49Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASKG RFKLDHETR KRQKT E PRE +RPKTHWDHVLEEMVWLS                                    KEEEQRLRKLALNISKDV
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV
        KKFW+KIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVE YKPS ++ST+EPHN H QEMDE KAVE  ELNV HE+DS DFDEEFDV
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDV

Query:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
        RSDDESEDNE+TIDEDEALITEEERQEEL+ALQNEVDLPLEELLKRYA EK
Subjt:  RSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

SwissProt top hitse value%identityAlignment
Q6ZRS2 Helicase SRCAP2.3e-1832.89Show/hide
Query:  KTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQMEL
        K L    E  RPK HWD++ EEM WLS                                    +EE+ +LR++A  ++KDV++FW  +EK+V +K Q  L
Subjt:  KTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQMEL

Query:  DEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTI--DEDE
        +EK+KKALD HL+F++GQTE+YS +L+++L +P   S+  S+    ++         A  P       + +  DF  +     +DE ED+E TI  +E +
Subjt:  DEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTI--DEDE

Query:  ALITEEERQEELDALQNEVDLPLEELLK
             E ++ E++ L+ E +LPLEELL+
Subjt:  ALITEEERQEELDALQNEVDLPLEELLK

Q7X9V2 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 14.4e-6256.42Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASK  + K D+E+R KRQKTLE P+E  RPKTHWDHVLEEM WLS                                    KEEEQRLRK+ALNISKD+
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVE-PAELN--VGHESDSADFDEE
        KKFW+K+EKLVLYKHQ+  +EKKKKA+DK LEFLLGQTERYSTMLAENLVEPYK  Q N+ ++P      + DE +A + P E+N   G ES S + DE+
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVE-PAELN--VGHESDSADFDEE

Query:  FDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEKGAR
        +D++S+DE+ED+E TI+EDE   T+ ERQEEL+ALQNEVDLP+EELL+RY   + +R
Subjt:  FDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEKGAR

Q8CHI8 E1A-binding protein p4009.6e-0928.12Show/hide
Query:  RELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQMELDEKKKK
        +E  RPK+HWD++LEEM W++                                    KEE+ RLR++A   +++++ FW  IE++V  K Q+EL+EK+KK
Subjt:  RELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQMELDEKKKK

Query:  ALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEALITEEER
        AL+          ++ S    E+ ++ +  S       P ++    +  RK      L                  +DDE ED E TI+E+EA     + 
Subjt:  ALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEALITEEER

Query:  QEELDALQNEVDLPLEELLKRYAG
          EL  L  E +LPL +L+K Y G
Subjt:  QEELDALQNEVDLPLEELLKRYAG

Q96L91 E1A-binding protein p4008.7e-1028.57Show/hide
Query:  QKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQME
        Q+ L   +E  RPK+HWD++LEEM W++                                    KEE+ RLR++A + +++++ FW  IE++V  K ++E
Subjt:  QKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQME

Query:  LDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEA
        L+EK+KKAL+      L +  R    L     +  + S ++S           M  RK      L                  +DDE +D E TI+E+EA
Subjt:  LDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEA

Query:  LITEEERQEELDALQNEVDLPLEELLKRYAG
             + Q EL  L  E +LPL +L+K Y G
Subjt:  LITEEERQEELDALQNEVDLPLEELLKRYAG

Q9NDJ2 Helicase domino1.2e-1424.83Show/hide
Query:  QKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQME
        ++ L   +E  RPK HWD++LEEMVWL+                                    K +E +L+++A  I+++VK FW  +EKLV YKHQ +
Subjt:  QKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQME

Query:  LDEKKKKALDKHLEFLLGQTERYSTMLAENL----------------------VEPYKPSQMNSTNEPHNAHFQE-------------------------
        ++EK+K+ALD+HL F++ QTE++S  L E +                       + ++P   +  +E   A  +E                         
Subjt:  LDEKKKKALDKHLEFLLGQTERYSTMLAENL----------------------VEPYKPSQMNSTNEPHNAHFQE-------------------------

Query:  ------MDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK
              ++ R  +   E +   ++++ D  ++ +  + + S+D+E TI + E    E + ++E+D L+ + DL +E+LL +Y  E+
Subjt:  ------MDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEK

Arabidopsis top hitse value%identityAlignment
AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein3.1e-6356.42Show/hide
Query:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV
        MASK  + K D+E+R KRQKTLE P+E  RPKTHWDHVLEEM WLS                                    KEEEQRLRK+ALNISKD+
Subjt:  MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLS------------------------------------KEEEQRLRKLALNISKDV

Query:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVE-PAELN--VGHESDSADFDEE
        KKFW+K+EKLVLYKHQ+  +EKKKKA+DK LEFLLGQTERYSTMLAENLVEPYK  Q N+ ++P      + DE +A + P E+N   G ES S + DE+
Subjt:  KKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVE-PAELN--VGHESDSADFDEE

Query:  FDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEKGAR
        +D++S+DE+ED+E TI+EDE   T+ ERQEEL+ALQNEVDLP+EELL+RY   + +R
Subjt:  FDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEKGAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTAAAGGTCTTAGGTTTAAACTTGATCACGAGACAAGAGTCAAGCGTCAAAAGACACTTGAAGTTCCAAGAGAACTTCATCGACCTAAAACACATTGGGATCA
TGTTTTAGAAGAGATGGTTTGGCTTTCAAAGGAAGAGGAGCAGCGGTTGAGAAAACTTGCTCTCAATATTTCGAAGGATGTAAAGAAGTTCTGGTTGAAAATAGAAAAGC
TGGTGCTTTACAAGCATCAGATGGAGCTTGACGAGAAAAAGAAAAAGGCACTTGACAAACACCTCGAGTTTCTTTTAGGGCAAACAGAAAGGTATTCGACAATGCTGGCA
GAAAATCTCGTTGAACCTTATAAACCATCGCAGATGAATTCTACAAATGAGCCACACAATGCTCACTTCCAAGAAATGGATGAAAGAAAAGCCGTTGAACCTGCAGAGTT
AAATGTTGGACATGAGTCGGATTCTGCAGACTTTGATGAAGAATTTGATGTAAGATCAGATGATGAATCAGAAGATAATGAGCGGACCATAGATGAAGATGAGGCTCTGA
TTACTGAAGAAGAAAGGCAAGAAGAATTGGATGCTTTGCAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATGCAGGAGAGAAAGGTGCACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTAAAGGTCTTAGGTTTAAACTTGATCACGAGACAAGAGTCAAGCGTCAAAAGACACTTGAAGTTCCAAGAGAACTTCATCGACCTAAAACACATTGGGATCA
TGTTTTAGAAGAGATGGTTTGGCTTTCAAAGGAAGAGGAGCAGCGGTTGAGAAAACTTGCTCTCAATATTTCGAAGGATGTAAAGAAGTTCTGGTTGAAAATAGAAAAGC
TGGTGCTTTACAAGCATCAGATGGAGCTTGACGAGAAAAAGAAAAAGGCACTTGACAAACACCTCGAGTTTCTTTTAGGGCAAACAGAAAGGTATTCGACAATGCTGGCA
GAAAATCTCGTTGAACCTTATAAACCATCGCAGATGAATTCTACAAATGAGCCACACAATGCTCACTTCCAAGAAATGGATGAAAGAAAAGCCGTTGAACCTGCAGAGTT
AAATGTTGGACATGAGTCGGATTCTGCAGACTTTGATGAAGAATTTGATGTAAGATCAGATGATGAATCAGAAGATAATGAGCGGACCATAGATGAAGATGAGGCTCTGA
TTACTGAAGAAGAAAGGCAAGAAGAATTGGATGCTTTGCAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATGCAGGAGAGAAAGGTGCACGATGA
Protein sequenceShow/hide protein sequence
MASKGLRFKLDHETRVKRQKTLEVPRELHRPKTHWDHVLEEMVWLSKEEEQRLRKLALNISKDVKKFWLKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLA
ENLVEPYKPSQMNSTNEPHNAHFQEMDERKAVEPAELNVGHESDSADFDEEFDVRSDDESEDNERTIDEDEALITEEERQEELDALQNEVDLPLEELLKRYAGEKGAR