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Sed0012338 (gene) of Chayote v1 genome

Gene IDSed0012338
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
Genome locationLG03:47668574..47675428
RNA-Seq ExpressionSed0012338
SyntenySed0012338
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035623.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa]5.2e-4691.15Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+VKKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

KAG6592401.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4588.03Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQET+ NTVRRASK+MTEQEARQILGVT E PWEEIVKKYDALFE+NAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQEEKDA
        ERLE+LY  KG   K+A
Subjt:  ERLESLYHGKGQEEKDA

KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4591.15Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQET+ NTVRRASK+MTEQEARQILGVT E PWEEIVKKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

XP_004139541.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus]1.5e-4590.27Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+ KKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

XP_008463624.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo]1.5e-4591.15Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+VKKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

TrEMBL top hitse value%identityAlignment
A0A0A0LW69 Uncharacterized protein7.3e-4690.27Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+ KKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

A0A1S3CJP3 mitochondrial import inner membrane translocase subunit tim167.3e-4691.15Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+VKKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim162.5e-4691.15Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETM NTVRRASK+MTEQEARQILGVTEE PWEE+VKKYDALFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

A0A6J1DR54 mitochondrial import inner membrane translocase subunit PAM16 like 2-like2.1e-4590.27Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+ NTVRRASK+MTEQEARQILGVTEE PWEEIVKKYD LFERNAQNGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  K Q+
Subjt:  ERLESLYHGKGQE

A0A6J1EF52 mitochondrial import inner membrane translocase subunit PAM16 like 2-like1.6e-4590.27Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQET+ NTVRRASK+MTEQEARQILGVT E PWEEIVKKYDALFE+NAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKGQE
        ERLE+LY  KGQ+
Subjt:  ERLESLYHGKGQE

SwissProt top hitse value%identityAlignment
Q6PBL0 Mitochondrial import inner membrane translocase subunit tim162.1e-1044.54Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERN--AQNGSFYLQSKVHR
        AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q    +    +   MT QEA+QIL ++   P EEI K Y+ LF+ N  A  GSFY+QSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERN--AQNGSFYLQSKVHR

Query:  AKERL-ESLYHGKGQEEKD
        AKERL E L   + Q+ K+
Subjt:  AKERL-ESLYHGKGQEEKD

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 25.0e-3672.97Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE M N VR+A K +TEQEARQILGVTE+  WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKG
        E LE +Y  +G
Subjt:  ERLESLYHGKG

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 11.1e-3070.09Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E    T++R    + E EARQILGVTE+  W+EI+KKYD LFERNAQNGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLY
        E LE+ Y
Subjt:  ERLESLY

Q9C1W5 Mitochondrial import inner membrane translocase subunit tim164.7e-1040Show/hide
Query:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNT---VRRASKMMTEQEARQILGVTEEMPWE-EIVKKYDALFERN--AQNGSFYLQSKVH
        + +   I++GS ++++AFVQAY+Q + NA++    Q     +   VRR    MT QEA  IL +  E   E E+ K++  +FE N   + GSFYLQSKV 
Subjt:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNT---VRRASKMMTEQEARQILGVTEEMPWE-EIVKKYDALFERN--AQNGSFYLQSKVH

Query:  RAKERLESLYHGKGQEEKDA
        RA E+L+S    K QE+  A
Subjt:  RAKERLESLYHGKGQEEKDA

Q9CQV1 Mitochondrial import inner membrane translocase subunit TIM162.1e-1041.53Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKM--MTEQEARQILGVTEEMPWEEIVKKYDALFERNAQN--GSFYLQSKVHR
        AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+QIL V++  P EE+ K Y+ LF+ N ++  GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKM--MTEQEARQILGVTEEMPWEEIVKKYDALFERNAQN--GSFYLQSKVHR

Query:  AKERLESLYHGKGQEEKD
        AKERL+     + QE+++
Subjt:  AKERLESLYHGKGQEEKD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam163.6e-3772.97Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE M N VR+A K +TEQEARQILGVTE+  WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLYHGKG
        E LE +Y  +G
Subjt:  ERLESLYHGKG

AT5G61880.1 Protein Transporter, Pam167.7e-3270.09Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E    T++R    + E EARQILGVTE+  W+EI+KKYD LFERNAQNGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLY
        E LE+ Y
Subjt:  ERLESLY

AT5G61880.2 Protein Transporter, Pam167.7e-3270.09Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E    T++R    + E EARQILGVTE+  W+EI+KKYD LFERNAQNGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAK

Query:  ERLESLY
        E LE+ Y
Subjt:  ERLESLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGCCAAGCCCTTACTAATGCTTCAAAGTCTGGTGT
TGCTCAAGAAACAATGCACAACACAGTCCGGAGAGCAAGCAAAATGATGACAGAGCAAGAAGCCAGGCAGATTTTGGGTGTCACCGAGGAAATGCCCTGGGAGGAAATTG
TGAAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGAATGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGCTTAGAAAGTCTCTATCACGGCAAA
GGTCAGGAAGAGAAGGATGCCTCTACCTGA
mRNA sequenceShow/hide mRNA sequence
ACTCATTAGAATCAAAATAGAAAAAAATTAAAATTGAAGCAAAGCATTGCAAAGGAACCAAGAATATAGATTGGGATTCAATTATTGAGCCGTTCACATATACGACCGGC
CCCAAACAGGCGCTACGCTACTACCCTACATCTCTCTCTCGTTTTCTTGGTTTTCCGGCCACCGCGCAGGTCGGCGCCGCCGCTGGAAATCGCAACAGTTCCGTCAACGT
CTTCGTTCTCCCGTCTCCTCCGCGTTTTAGGCTCTTTGGCTTCGATTCGCGAGTTCCAGGCCACCATTGTTCCTTCTACTCCGATAACCCTTGTTCGTTCCTGTCATTTC
CAACCCATTCCGGCTGTTTCACATACTCACACTCTTTCTCCACTGCTGCTTTGCTCTACCGGCATTAACGACTCTGAACCTGTAATCAAGGCCAGCCAATTAATCATGGC
TGCGAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGCCAAGCCCTTACTAATGCTTCAAAGTCTGGTGTTGCTC
AAGAAACAATGCACAACACAGTCCGGAGAGCAAGCAAAATGATGACAGAGCAAGAAGCCAGGCAGATTTTGGGTGTCACCGAGGAAATGCCCTGGGAGGAAATTGTGAAG
AAATATGACGCTTTGTTTGAAAGGAATGCTCAGAATGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGCTTAGAAAGTCTCTATCACGGCAAAGGTCA
GGAAGAGAAGGATGCCTCTACCTGAGCAATGATTATGGAGGTGGCTTTTCTTTTTTTTATATAATTTTTTCTTTTGACTATTAGGTCTTGAAGGTTAATGCAAGTAAGTA
ATACAGTTACCGCTACAATAATAAAATTAAAAAAAAAAAAAATTATCATTTGTTGTGTTGCTGTTCTATTTGTCAAAGCTACCCTTGTGAGCCATCACTTGTGTCAAAGA
TCGTCAGGAAAAGGGCCATATTTCTGCTATACTTGTCTCGGTTCCTTGGATTTCAATGATGTCTGTCTCCAAGGACGAATTGGAACGCGAACATGGCAAGAAGAATGTTC
GGCCTCTTCCTAAGGAACTCGTGGTGGGATTCGTCAATGCGAGGCAACAACCATTGCAAGTATAACTGCAAAATGGGAACAAACATGACCACGAAAAATGGCTTCTCTGC
TCCATGGCAAATGAGCCCTCAAATTAGGAGTGTACAAAAAAACCAGTAACTCGAGCTACCCGGACTACCCAACTCAAACCGTAAGGGTTTTGGGTTTGTAACAATATGAA
ATATTATGTTATTATTCTTTGGTTTTATCTGCTGCTCTTATTCTGTTATGGGCTCACTTGTATATATATATGCCCTTTGGGCTTTTATCAATAACATGGACTTTTCTCAA
A
Protein sequenceShow/hide protein sequence
MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETMHNTVRRASKMMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQNGSFYLQSKVHRAKERLESLYHGK
GQEEKDAST