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Sed0012341 (gene) of Chayote v1 genome

Gene IDSed0012341
OrganismSechium edule (Chayote v1)
DescriptionPSI-G
Genome locationLG08:40109011..40109469
RNA-Seq ExpressionSed0012341
SyntenySed0012341
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596752.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5074.19Show/hide
Query:  TTMAAAAASSF-----------SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH
        ++ A  AASSF           S +S+Q L  LP +KS+  +  V+SQRS  +VVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN V+H
Subjt:  TTMAAAAASSF-----------SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH

Query:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]3.4e-5074.19Show/hide
Query:  TTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH
        ++ A  AASSFSA           +S+Q L  LP +KS+  +  V+S RS  +VVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN V+H
Subjt:  TTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH

Query:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

XP_023005588.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]8.9e-5172.96Show/hide
Query:  SSLQTTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQN
        +++ ++ A  AASSFSA           +S+Q L  LP +KS+  +  V+S RS  LVVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN
Subjt:  SSLQTTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQN

Query:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
         V+HFEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

XP_023540530.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-5076.51Show/hide
Query:  AASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDV
        AASSFSA           +S+Q L  LP +KS+  +  V+S RS  +VVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN V+HFEAGDV
Subjt:  AASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDV

Query:  RAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        RAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  RAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]3.4e-5081.2Show/hide
Query:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG
        +AVSFQ L  LP VKS+     ++S+RS  +VVKAELNPS+VIS+STG+SLFLGRFVFFNFQRENV KQVPEQN ++HFEAGDVRAKEYVSLLKSNDPVG
Subjt:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG

Query:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G1.6e-5073.12Show/hide
Query:  MAAAAASS-------FSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQ
        MAAAA+SS       FSA           +SFQ L  LP VKS+  V   +S+RS  + VKAELNPS+VIS+STG+SLFLGRFVFFNFQRENVGKQVPEQ
Subjt:  MAAAAASS-------FSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQ

Query:  NEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        N ++HFEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G1.1e-4978.2Show/hide
Query:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG
        + +SFQ L  LP VKS+  +   +++RS  + VKAELNPS+VIS+STG+SLFLGRFVFFNFQRENV KQVPEQN ++HFEAGDVRAKEYVSLLKSNDPVG
Subjt:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG

Query:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G1.1e-4978.2Show/hide
Query:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG
        + +SFQ L  LP VKS+  +   +++RS  + VKAELNPS+VIS+STG+SLFLGRFVFFNFQRENV KQVPEQN ++HFEAGDVRAKEYVSLLKSNDPVG
Subjt:  SAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVG

Query:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G1.6e-5074.19Show/hide
Query:  TTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH
        ++ A  AASSFSA           +S+Q L  LP +KS+  +  V+S RS  +VVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN V+H
Subjt:  TTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSH

Query:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        FEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  FEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G4.3e-5172.96Show/hide
Query:  SSLQTTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQN
        +++ ++ A  AASSFSA           +S+Q L  LP +KS+  +  V+S RS  LVVKAELNPSVVIS+STG+SLFLGRFVFFNFQRENV KQVPEQN
Subjt:  SSLQTTMAAAAASSFSA-----------VSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQN

Query:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
         V+HFEAGDVRAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Subjt:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic4.0e-4673.98Show/hide
Query:  LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWG
        L I  +N    +  S     +  +AEL+PS+VIS+STG+SLFLGRFVFFNFQREN+ KQVPEQN +SHFEAGD RAKEYVSLLKSNDPVGFNIVDVL+WG
Subjt:  LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWG

Query:  SIGHIVAYYILATSSNGYDPKFF
        SIGHIVAYYILAT+SNGYDP FF
Subjt:  SIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic9.0e-1438.21Show/hide
Query:  QSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRE--NVGKQV-PEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFN
        Q+L   P ++++ RV   R+ R   +V KA L+P +VIS ST   L +GRFVF  +QR   N    V P+    ++F+  D++     ++  +NDP GFN
Subjt:  QSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRE--NVGKQV-PEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFN

Query:  IVDVLSWGSIGHIVAYYILATSS
        I+DV  WG++GH V + +LA +S
Subjt:  IVDVLSWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic1.7e-4161.97Show/hide
Query:  MAAAAASSFSAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVS
        MA + A+  S  +   L L P  ++      V       +  +A L PSVVIS+STG+SL +GRFVFFNFQRENV KQVPEQN  +HFEAGD RAKE+  
Subjt:  MAAAAASSFSAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVS

Query:  LLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
        +LKSNDPVGFN+VDVL+WGSIGHIVAYYILAT+SNGYDP FF
Subjt:  LLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic1.9e-4362.26Show/hide
Query:  MISSSSLQTTMAAAAASSFSAVSFQSLCL------LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQN
        ++S ++  T ++    +S S    + L L      LP + + GR       +S+  VV+AEL+PS+VIS+STG+SLFLGRFVFFNFQRENV KQ +PEQN
Subjt:  MISSSSLQTTMAAAAASSFSAVSFQSLCL------LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQN

Query:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
          +HFEAGD RAKEYVSLLKSNDP+GFNIVDVL+WGSIGHIVAYYILATSSNGYDP FF
Subjt:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic4.6e-1849.46Show/hide
Query:  NPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYD
        N S +IS ST   L LGRFVF  FQR  V +  +PEQN V          + + S+LK+NDP GF +VDVL+WG++GH V ++ILAT++NGY+
Subjt:  NPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQNEVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G1.3e-4462.26Show/hide
Query:  MISSSSLQTTMAAAAASSFSAVSFQSLCL------LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQN
        ++S ++  T ++    +S S    + L L      LP + + GR       +S+  VV+AEL+PS+VIS+STG+SLFLGRFVFFNFQRENV KQ +PEQN
Subjt:  MISSSSLQTTMAAAAASSFSAVSFQSLCL------LPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQ-VPEQN

Query:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF
          +HFEAGD RAKEYVSLLKSNDP+GFNIVDVL+WGSIGHIVAYYILATSSNGYDP FF
Subjt:  EVSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCCTCATCCTCCCTCCAAACAACAATGGCCGCTGCCGCCGCATCCTCCTTCTCCGCCGTATCATTCCAAAGCCTCTGCCTGCTCCCAATCGTCAAATCGAATGG
GAGAGTGGGCGTGGTGAGGAGCCAGAGATCCACTGGGTTGGTGGTGAAGGCGGAGCTAAACCCATCTGTGGTGATAAGCGTGAGCACGGGTGTGTCCCTGTTTTTGGGGC
GATTCGTGTTCTTCAACTTCCAGAGGGAGAATGTGGGGAAGCAAGTGCCAGAGCAGAACGAGGTTTCCCATTTCGAAGCAGGGGATGTTAGGGCTAAAGAATATGTGAGC
CTGTTGAAATCTAATGACCCTGTTGGCTTTAATATTGTGGATGTTCTTTCTTGGGGCTCCATTGGCCATATTGTTGCTTATTACATATTGGCCACGTCTAGCAATGGCTA
TGATCCCAAGTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATCCTCATCCTCCCTCCAAACAACAATGGCCGCTGCCGCCGCATCCTCCTTCTCCGCCGTATCATTCCAAAGCCTCTGCCTGCTCCCAATCGTCAAATCGAATGG
GAGAGTGGGCGTGGTGAGGAGCCAGAGATCCACTGGGTTGGTGGTGAAGGCGGAGCTAAACCCATCTGTGGTGATAAGCGTGAGCACGGGTGTGTCCCTGTTTTTGGGGC
GATTCGTGTTCTTCAACTTCCAGAGGGAGAATGTGGGGAAGCAAGTGCCAGAGCAGAACGAGGTTTCCCATTTCGAAGCAGGGGATGTTAGGGCTAAAGAATATGTGAGC
CTGTTGAAATCTAATGACCCTGTTGGCTTTAATATTGTGGATGTTCTTTCTTGGGGCTCCATTGGCCATATTGTTGCTTATTACATATTGGCCACGTCTAGCAATGGCTA
TGATCCCAAGTTCTTCTAG
Protein sequenceShow/hide protein sequence
MISSSSLQTTMAAAAASSFSAVSFQSLCLLPIVKSNGRVGVVRSQRSTGLVVKAELNPSVVISVSTGVSLFLGRFVFFNFQRENVGKQVPEQNEVSHFEAGDVRAKEYVS
LLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF