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Sed0012343 (gene) of Chayote v1 genome

Gene IDSed0012343
OrganismSechium edule (Chayote v1)
DescriptionBeta-1,4-N-acetylglucosaminyltransferase
Genome locationLG10:19817148..19818336
RNA-Seq ExpressionSed0012343
SyntenySed0012343
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022946585.1 uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata]3.3e-2148.9Show/hide
Query:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS
        MD S+AP   +NL+VIRED+FV  + P  P  H      PS        P   E  SPA          EA +R  EI+KAKVISGI  F   A   L S
Subjt:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS

Query:  VFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
          PVTA  AAL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KIS+LL+QIAQMNE+LSARR+VPVVR+K
Subjt:  VFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

XP_022999312.1 uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima]6.2e-2045.41Show/hide
Query:  RNLIVIREDHFVEQQQP--PSTHREDLPL------------------------------PS--PESSEPPSPAA---------EAAIRFCEILKAKVISG
        +N +VIRED+FV  + P  P TH +  PL                              PS  P   EP SPAA         EA +R  EI+KAKVISG
Subjt:  RNLIVIREDHFVEQQQP--PSTHREDLPL------------------------------PS--PESSEPPSPAA---------EAAIRFCEILKAKVISG

Query:  ISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
        I  F  S A  L S  PVTA   AL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KISQLL+QIAQMNE+LSARR+VPVVR+K
Subjt:  ISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

XP_022999313.1 uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima]1.6e-2046.49Show/hide
Query:  RNLIVIREDHFVEQQQP-----------------------PSTHREDLPLPSPESSEPPSPAA---------EAAIRFCEILKAKVISGISRFRRSAADS
        +N +VIRED+FV  + P                       PS    D P   P   EP SPAA         EA +R  EI+KAKVISGI  F  S A  
Subjt:  RNLIVIREDHFVEQQQP-----------------------PSTHREDLPLPSPESSEPPSPAA---------EAAIRFCEILKAKVISGISRFRRSAADS

Query:  LRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
        L S  PVTA   AL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KISQLL+QIAQMNE+LSARR+VPVVR+K
Subjt:  LRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

XP_023520476.1 uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo]8.7e-2249.46Show/hide
Query:  MDSSKA--PNRNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS
        MD S+A    +NL+VIRED+FV  + P  P  H      PS        P   EP SPA          EA +R  EI+KAKVISGI  F  S A  L S
Subjt:  MDSSKA--PNRNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS

Query:  VFPVTAAMAALLAVSLLW-------FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
          PVTA  AAL  + LL+        K  LPW  P      +N+ RLLLLLKHKD+KIS+LLLQIAQMNE+LSARR+VPVVR+K
Subjt:  VFPVTAAMAALLAVSLLW-------FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

XP_038889624.1 uncharacterized protein LOC120079493 [Benincasa hispida]8.7e-2249.43Show/hide
Query:  NLIVIREDHFVEQQQP--PSTHREDLPLPS-------------PESSEPPSPA--------AEAAIRFCEILKAKVISGISRFRRSAADSLRSVFPVTAA
        N +VIRE++FV ++ P  P  H EDLP+ S              ESS  P+ +         EA +R CE+ KAKV+SGI  F  S A  L SVFPVTA 
Subjt:  NLIVIREDHFVEQQQP--PSTHREDLPLPS-------------PESSEPPSPA--------AEAAIRFCEILKAKVISGISRFRRSAADSLRSVFPVTAA

Query:  MAALLAVSLLW---FKTGLPWCRP-----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
         A L+ +  L     K  LPW RP      ++N+ RL+LLL+HKDEKISQLLLQIA+MNE LSARR+VPVVRIK
Subjt:  MAALLAVSLLW---FKTGLPWCRP-----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

TrEMBL top hitse value%identityAlignment
A0A5A7T5Z8 Uncharacterized protein1.3e-1846.45Show/hide
Query:  PNRNLIVIREDHFVEQQQP--PSTHREDLPL-------------------PSPESSEPPSP-------AAEAAIRFCEILKAKVISGISRFRRSAADSLR
        P+ N +VIR+D+FV  + P  P    EDLP+                    S +SS P S          EA +R CE++KAKV+SGI  F       LR
Subjt:  PNRNLIVIREDHFVEQQQP--PSTHREDLPL-------------------PSPESSEPPSP-------AAEAAIRFCEILKAKVISGISRFRRSAADSLR

Query:  SVFPVTAAMAALLAVSL----LWFKTGLPWCRP----IKNNKPR-LLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
        S+F  T AMA LL V L    +  K  LPW RP    ++ +K   L+LLLKHKDEKI+QLLLQIAQMNE LSARR+VPVVRIK
Subjt:  SVFPVTAAMAALLAVSL----LWFKTGLPWCRP----IKNNKPR-LLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

A0A6J1G485 uncharacterized protein LOC111450604 isoform X14.4e-1945.27Show/hide
Query:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTH------------REDLPLPSPESSEP---------------PSPA---------AEAAIRFCEILKA
        MD S+AP   +NL+VIRED+FV  + P  P  H             E    PS  S EP                SPA          EA +R  EI+KA
Subjt:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTH------------REDLPLPSPESSEP---------------PSPA---------AEAAIRFCEILKA

Query:  KVISGISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRI
        KVISGI  F   A   L S  PVTA  AAL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KIS+LL+QIAQMNE+LSARR+VPVVR+
Subjt:  KVISGISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRI

Query:  K
        K
Subjt:  K

A0A6J1G4A7 uncharacterized protein LOC111450604 isoform X21.6e-2148.9Show/hide
Query:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS
        MD S+AP   +NL+VIRED+FV  + P  P  H      PS        P   E  SPA          EA +R  EI+KAKVISGI  F   A   L S
Subjt:  MDSSKAPN--RNLIVIREDHFVEQQQP--PSTHREDLPLPS--------PESSEPPSPA---------AEAAIRFCEILKAKVISGISRFRRSAADSLRS

Query:  VFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
          PVTA  AAL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KIS+LL+QIAQMNE+LSARR+VPVVR+K
Subjt:  VFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

A0A6J1KAJ3 uncharacterized protein LOC111493726 isoform X13.0e-2045.41Show/hide
Query:  RNLIVIREDHFVEQQQP--PSTHREDLPL------------------------------PS--PESSEPPSPAA---------EAAIRFCEILKAKVISG
        +N +VIRED+FV  + P  P TH +  PL                              PS  P   EP SPAA         EA +R  EI+KAKVISG
Subjt:  RNLIVIREDHFVEQQQP--PSTHREDLPL------------------------------PS--PESSEPPSPAA---------EAAIRFCEILKAKVISG

Query:  ISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
        I  F  S A  L S  PVTA   AL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KISQLL+QIAQMNE+LSARR+VPVVR+K
Subjt:  ISRFRRSAADSLRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

A0A6J1KJA9 uncharacterized protein LOC111493726 isoform X27.9e-2146.49Show/hide
Query:  RNLIVIREDHFVEQQQP-----------------------PSTHREDLPLPSPESSEPPSPAA---------EAAIRFCEILKAKVISGISRFRRSAADS
        +N +VIRED+FV  + P                       PS    D P   P   EP SPAA         EA +R  EI+KAKVISGI  F  S A  
Subjt:  RNLIVIREDHFVEQQQP-----------------------PSTHREDLPLPSPESSEPPSPAA---------EAAIRFCEILKAKVISGISRFRRSAADS

Query:  LRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK
        L S  PVTA   AL  + LL+      K  LPW  P      +N+ RLLLLLKHKD+KISQLL+QIAQMNE+LSARR+VPVVR+K
Subjt:  LRSVFPVTAAMAALLAVSLLW-----FKTGLPWCRP----IKNNKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G03310.1 unknown protein4.9e-0738.46Show/hide
Query:  VISGISRFRRSAADSLRSVFPVTAAMAALLAVSLLWFKTGLPWCRPIKNNKPR-LLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRI
        +   + R R S     R  + +T      L +SL++ K  + W R +   K R LLLLL+ KD++I +L+++I ++NE+LS+RRRV VVRI
Subjt:  VISGISRFRRSAADSLRSVFPVTAAMAALLAVSLLWFKTGLPWCRPIKNNKPR-LLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCTAAAGCCCCAAACAGAAATTTGATTGTGATCAGAGAAGACCATTTTGTTGAGCAGCAACAACCGCCATCCACTCACCGCGAAGATTTGCCACTGCCTTC
TCCCGAGTCTTCTGAACCGCCATCGCCGGCGGCTGAAGCTGCTATTCGGTTCTGTGAGATTCTTAAAGCCAAAGTCATTTCTGGAATTTCTCGATTCCGACGCTCCGCTG
CTGACAGCCTGCGCTCTGTTTTTCCGGTCACTGCAGCAATGGCGGCTCTGTTGGCGGTGTCGCTGCTTTGGTTCAAGACGGGCCTGCCATGGTGTCGCCCGATTAAGAAT
AACAAACCACGTTTGCTTCTTCTCCTTAAACACAAGGATGAGAAGATCAGCCAACTCTTACTACAAATTGCTCAAATGAACGAAATCCTATCAGCTCGTCGAAGGGTTCC
TGTTGTAAGAATTAAATGA
mRNA sequenceShow/hide mRNA sequence
CTGTGACACATAAACACAATCAGAAACCGAAACTCCGAACAAGAAATGGATTCATCTAAAGCCCCAAACAGAAATTTGATTGTGATCAGAGAAGACCATTTTGTTGAGCA
GCAACAACCGCCATCCACTCACCGCGAAGATTTGCCACTGCCTTCTCCCGAGTCTTCTGAACCGCCATCGCCGGCGGCTGAAGCTGCTATTCGGTTCTGTGAGATTCTTA
AAGCCAAAGTCATTTCTGGAATTTCTCGATTCCGACGCTCCGCTGCTGACAGCCTGCGCTCTGTTTTTCCGGTCACTGCAGCAATGGCGGCTCTGTTGGCGGTGTCGCTG
CTTTGGTTCAAGACGGGCCTGCCATGGTGTCGCCCGATTAAGAATAACAAACCACGTTTGCTTCTTCTCCTTAAACACAAGGATGAGAAGATCAGCCAACTCTTACTACA
AATTGCTCAAATGAACGAAATCCTATCAGCTCGTCGAAGGGTTCCTGTTGTAAGAATTAAATGACTAATACAGTCTACACGTCGTTCGATTTGAGGGTGGAACTGCTTAA
TTTTGATGGCAAAGAGTTTTGCATATGCTCTTGCAATGTATAATATGAAACATTCCTGTCACATCATTTGTATATTTGCTTTTGTTTCATACTTACTAAATATAAAAAAT
GAAGTCCTTTATATGTTTAGATAAAGAAGGAATACCTCTTCTAATATCAATCTTTCTTTTTATCATCAAA
Protein sequenceShow/hide protein sequence
MDSSKAPNRNLIVIREDHFVEQQQPPSTHREDLPLPSPESSEPPSPAAEAAIRFCEILKAKVISGISRFRRSAADSLRSVFPVTAAMAALLAVSLLWFKTGLPWCRPIKN
NKPRLLLLLKHKDEKISQLLLQIAQMNEILSARRRVPVVRIK