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Sed0012350 (gene) of Chayote v1 genome

Gene IDSed0012350
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:2059199..2059540
RNA-Seq ExpressionSed0012350
SyntenySed0012350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1362.96Show/hide
Query:  QADLVKIGREGFDLIDKFFGRSRAARRAP--APARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRA
        + DL KIGREGFDLID++FGR+ A RRA   A ARP  PQ P  AEQ P  RKK E    A NC+ VAK RGGIV+TTWRA
Subjt:  QADLVKIGREGFDLIDKFFGRSRAARRAP--APARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRA

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1160Show/hide
Query:  QADLVKIGREGFDLIDKFFGRSRAARRAPAPARP--PQPPRTAEQIP-SIRKKNETPVTAENCDLVAKTRGGIVVTTWRA
        +ADL KIGREGF+LID++FGR  A RR PA ARP  PQ P  AEQ P  +R+K   PV   NC+ VA+ RGG+V+TTWRA
Subjt:  QADLVKIGREGFDLIDKFFGRSRAARRAPAPARP--PQPPRTAEQIP-SIRKKNETPVTAENCDLVAKTRGGIVVTTWRA

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]3.5e-1051.02Show/hide
Query:  MGLRDRE-IRAQADLVKIGREGFDLIDKFFGR--SRAARRAPA-----PARPPQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK
        MG R+RE I   A+L +IG EGF LIDKFFGR  +   RR  A     PA+   P + AEQ PS  K+ +  V     D +AKTRGGIV+TTWR+YAK
Subjt:  MGLRDRE-IRAQADLVKIGREGFDLIDKFFGR--SRAARRAPA-----PARPPQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]7.9e-1561.7Show/hide
Query:  LRDREIR-AQADLVKIGREGFDLIDKFFGR--SRAARRAPA-PARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK
        LR+REIR ++ DL KIGREGF +ID++FGR  S  ARR  A  ARP  PQPPR AEQ P IRK  E PV A   D VAK  GG V+TTWR YAK
Subjt:  LRDREIR-AQADLVKIGREGFDLIDKFFGR--SRAARRAPA-PARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein3.8e-1561.7Show/hide
Query:  LRDREIR-AQADLVKIGREGFDLIDKFFGR--SRAARRAPA-PARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK
        LR+REIR ++ DL KIGREGF +ID++FGR  S  ARR  A  ARP  PQPPR AEQ P IRK  E PV A   D VAK  GG V+TTWR YAK
Subjt:  LRDREIR-AQADLVKIGREGFDLIDKFFGR--SRAARRAPA-PARP--PQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK

A0A0A0KI19 Uncharacterized protein1.7e-1051.02Show/hide
Query:  MGLRDRE-IRAQADLVKIGREGFDLIDKFFGR--SRAARRAPA-----PARPPQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK
        MG R+RE I   A+L +IG EGF LIDKFFGR  +   RR  A     PA+   P + AEQ PS  K+ +  V     D +AKTRGGIV+TTWR+YAK
Subjt:  MGLRDRE-IRAQADLVKIGREGFDLIDKFFGR--SRAARRAPA-----PARPPQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGAGAGATAGAGAAATTAGAGCTCAAGCTGATTTGGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTTCGGCCGATCACGGGCGGCGAGACG
GGCGCCGGCGCCGGCGAGGCCGCCGCAGCCGCCGCGTACGGCGGAGCAAATCCCTTCAATAAGGAAGAAGAATGAAACTCCGGTGACGGCGGAGAACTGCGATCTGGTGG
CGAAAACACGTGGCGGAATCGTGGTTACAACTTGGCGTGCGTATGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
CACAAGCATTACAAAAACAAATTCCCAAAAAAAAAAAAAAAATTTAATTTTTCTCACTTTTTGGAAATTATGGGTTTGAGAGATAGAGAAATTAGAGCTCAAGCTGATTT
GGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTTCGGCCGATCACGGGCGGCGAGACGGGCGCCGGCGCCGGCGAGGCCGCCGCAGCCGCCGCGTACGG
CGGAGCAAATCCCTTCAATAAGGAAGAAGAATGAAACTCCGGTGACGGCGGAGAACTGCGATCTGGTGGCGAAAACACGTGGCGGAATCGTGGTTACAACTTGGCGTGCG
TATGCAAAATGA
Protein sequenceShow/hide protein sequence
MGLRDREIRAQADLVKIGREGFDLIDKFFGRSRAARRAPAPARPPQPPRTAEQIPSIRKKNETPVTAENCDLVAKTRGGIVVTTWRAYAK