CuGenDBv2

Gene ID	Sed0012351
Organism	Sechium edule (Chayote v1)
Description	leukocyte receptor cluster member 1 homolog
Genome location	LG05:8083920..8086177
RNA-Seq Expression	Sed0012351
Synteny	Sed0012351
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152406.1 leukocyte receptor cluster member 1 homolog [Cucumis sativus]

2.3e-87

83.7

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQVRKRDAEFRLEQLRTA+GLAPV+ DT+KP+ETDLKPGHINLFEGIKIFDP+KGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKP-GNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERAL
          EDGS KKKRMKKEEVEK+VIT EDEKYKLGYGVAGKGVK+PWYLE+P  +DD E+ +N+GS R  + NVKKGEKKTLEELRAERLKREQKEKGRERAL
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKP-GNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERAL

Query:  IAERNRKSRTTAPREGDSSSRRWKSRR
        IAER+RKS   A REGD SSRRWKSRR
Subjt:  IAERNRKSRTTAPREGDSSSRRWKSRR

XP_008437093.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo]

6.3e-90

84.96

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+GLAPV+ DT+KP+ETDLKPGHINLFEGIKIFDP+KGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI
          EDGS KKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLE+P  DD E+ +N+GSSR    NVKKGEKKTLEELRAERLKREQKEKGRERALI
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI

Query:  AERNRKSRTTAPREGDSSSRRWKSRR
        AER+RKS   A REGDSSSRRWKSRR
Subjt:  AERNRKSRTTAPREGDSSSRRWKSRR

XP_023550759.1 leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo]

1.3e-87

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE
        MGGHGGLNILPQKRWNVYNYENREKVR+DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+G+APV+ DT KP+ETDLKPGH+NLFEGIKIFDPVK S  E
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE

Query:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA
         G +  KKKRMKKEEVEK+VITAEDEKYKLGYGVAGKGVKLPWYLE+   DDAES+ N+ SSR V  NVKKG KKTLEELRAERLKREQKEKGRERALIA
Subjt:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA

Query:  ERNRKSRTTAPREGDSSSRRWKSRR
        ER+ KS  TA RE DSSSRRWKSRR
Subjt:  ERNRKSRTTAPREGDSSSRRWKSRR

XP_038874709.1 leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida]

1.1e-89

86.73

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKVR+DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+GLA V+ DTAKP+ETDLKPGHINLFEGIKIFDPVKGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERALI
          EDGS K+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLE+PG DDAES++N+GSSR  + NVKKGEKKTLEELRAERLKREQKEKGRERALI
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERALI

Query:  AERNRKSRTTAPREGDSSSRRWKSRR
        A   RKS  TA REGDSSSRRWKSRR
Subjt:  AERNRKSRTTAPREGDSSSRRWKSRR

XP_038874710.1 leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida]

1.1e-89

86.73

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKVR+DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+GLA V+ DTAKP+ETDLKPGHINLFEGIKIFDPVKGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERALI
          EDGS K+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLE+PG DDAES++N+GSSR  + NVKKGEKKTLEELRAERLKREQKEKGRERALI
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERALI

Query:  AERNRKSRTTAPREGDSSSRRWKSRR
        A   RKS  TA REGDSSSRRWKSRR
Subjt:  AERNRKSRTTAPREGDSSSRRWKSRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV3 Cir_N domain-containing protein

1.1e-87

83.7

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQVRKRDAEFRLEQLRTA+GLAPV+ DT+KP+ETDLKPGHINLFEGIKIFDP+KGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKP-GNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERAL
          EDGS KKKRMKKEEVEK+VIT EDEKYKLGYGVAGKGVK+PWYLE+P  +DD E+ +N+GS R  + NVKKGEKKTLEELRAERLKREQKEKGRERAL
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKP-GNDDAESNDNEGSSR--AVNVKKGEKKTLEELRAERLKREQKEKGRERAL

Query:  IAERNRKSRTTAPREGDSSSRRWKSRR
        IAER+RKS   A REGD SSRRWKSRR
Subjt:  IAERNRKSRTTAPREGDSSSRRWKSRR

A0A1S3AT65 leukocyte receptor cluster member 1 homolog

3.1e-90

84.96

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+GLAPV+ DT+KP+ETDLKPGHINLFEGIKIFDP+KGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI
          EDGS KKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLE+P  DD E+ +N+GSSR    NVKKGEKKTLEELRAERLKREQKEKGRERALI
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI

Query:  AERNRKSRTTAPREGDSSSRRWKSRR
        AER+RKS   A REGDSSSRRWKSRR
Subjt:  AERNRKSRTTAPREGDSSSRRWKSRR

A0A5A7TDI4 Leukocyte receptor cluster member 1-like protein

2.4e-87

84.62

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-
        MGGHGGLNILPQKRWNVYNYENREKV++DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+GLAPV+ DT+KP+ETDLKPGHINLFEGIKIFDP+KGS   
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSK-

Query:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI
          EDGS KKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLE+P  DD E+ +N+GSSR    NVKKGEKKTLEELRAERLKREQKEKGRERALI
Subjt:  --EDGSEKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRA--VNVKKGEKKTLEELRAERLKREQKEKGRERALI

Query:  AERNRKSRTTAPREGDSSSRR
        AER+RKS   A REGDSSSRR
Subjt:  AERNRKSRTTAPREGDSSSRR

A0A6J1E3T1 leukocyte receptor cluster member 1 homolog

5.4e-87

82.67

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE
        MGGHGGLNILPQKRWNVYNYENREKVR+DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+G+APV+ DT KP+ETDLKPGH+NLFEGIKIFDPVK S  E
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE

Query:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA
         G +  KKKRMK+EEVEK+VITAEDEKYKLGYGVAGKGVKLPWYLE+   DDAES+ N+ S R V  N+KKG KKTLEELRAERLKREQKEKGRERALIA
Subjt:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA

Query:  ERNRKSRTTAPREGDSSSRRWKSRR
        ER+ KS TT+ RE DSSSRRWKSRR
Subjt:  ERNRKSRTTAPREGDSSSRRWKSRR

A0A6J1I3I0 leukocyte receptor cluster member 1 homolog

1.4e-87

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE
        MGGHGGLNILPQKRWNVYNYENREKVR+DEEAAAKEEQLKREQ RKRDAEFRLEQLRTA+G+APV+ DT KP+ETDLKPGH+NLFEGIKIFDPVK S  E
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKE

Query:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA
         G +  KKKRMKKEEVEK+VITAEDEKYKLGYGVAGKGVKLPWYLE+   DDAES+ N  SSR V  NVKKG KKTLEELRAERLKREQKEKGRERALIA
Subjt:  DGSE--KKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAV--NVKKGEKKTLEELRAERLKREQKEKGRERALIA

Query:  ERNRKSRTTAPREGDSSSRRWKSRR
        ER+ KS  TA RE DSSSRRWKSRR
Subjt:  ERNRKSRTTAPREGDSSSRRWKSRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G03010.1 Family of unknown function (DUF577)

4.2e-07

44.76

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Query:  VRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKEDG----SEKKKRM---------KKE
        VRKDEEAAA+EEQ+KRE  RKRDAE RLE LR  +GLAP+       LE   K    N        D V+G   + G      KKK+M         K+E
Subjt:  VRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKEDG----SEKKKRM---------KKE

Query:  EVEKK
         VEK+
Subjt:  EVEKK

AT4G16530.1 Family of unknown function (DUF577)

3.8e-48

50.61

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAP--------------------VVTDTAKPLET----D
        MGGHGGLNILPQKRWNVYN++NREKVRK+EEAAA+EEQ+KRE+ RKRDAE RLE LR  +GLAP                    VV  TA  +E+    +
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAP--------------------VVTDTAKPLET----D

Query:  LKPGHINLFEGIKIFDPV------KGSSKEDGSEKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLEKPG--NDDAESNDNEG
         K GHINLFEGI+IFDP+      K + +ED  +++K+M+KE       +A+D          EKY+LGYGVAGKGVK PWYLEK    ND     D++G
Subjt:  LKPGHINLFEGIKIFDPV------KGSSKEDGSEKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLEKPG--NDDAESNDNEG

Query:  SSRAVNVKKGE---KKTLEELRAERLKREQKEKGRERALIAERNRKS
               KK +   KK+L+ELR ERLKRE+ EK RERAL  ++++++
Subjt:  SSRAVNVKKGE---KKTLEELRAERLKREQKEKGRERALIAERNRKS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGGTCATGGAGGTTTAAACATTCTTCCTCAAAAGCGATGGAATGTGTACAACTATGAGAACAGAGAGAAAGTGCGGAAAGATGAAGAAGCTGCAGCGAAAGAAGA
ACAGCTTAAACGCGAGCAGGTTAGGAAACGGGATGCCGAGTTTCGTCTCGAGCAGCTTCGAACGGCAAAGGGGTTAGCTCCTGTAGTAACTGACACTGCAAAGCCTCTAG
AAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCTTCAAAGGAAGATGGGTCTGAGAAGAAGAAGAGGATGAAG
AAGGAAGAAGTGGAGAAAAAGGTTATCACAGCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTTAAGTTGCCATGGTACCTTGAGAAGCCTGG
GAATGATGATGCTGAGAGTAATGATAATGAAGGATCATCAAGAGCAGTGAATGTAAAAAAGGGAGAAAAGAAGACATTGGAAGAATTGAGGGCCGAGCGTCTCAAACGAG
AGCAGAAGGAAAAGGGAAGGGAGCGTGCTTTAATTGCGGAGAGAAATCGAAAGAGTAGAACAACAGCTCCAAGGGAAGGGGATTCTTCATCCAGGAGGTGGAAATCAAGA
AGATGA

mRNA sequence

Show/hide mRNA sequence

TAATTATAAGTTTTGGGGAATTTCGGTTGTGCGAAGGGGATTCATCTTCCATCCGATTGAGGTGAGCTATAATCTTTGATTATGGGGGGTCATGGAGGTTTAAACATTCT
TCCTCAAAAGCGATGGAATGTGTACAACTATGAGAACAGAGAGAAAGTGCGGAAAGATGAAGAAGCTGCAGCGAAAGAAGAACAGCTTAAACGCGAGCAGGTTAGGAAAC
GGGATGCCGAGTTTCGTCTCGAGCAGCTTCGAACGGCAAAGGGGTTAGCTCCTGTAGTAACTGACACTGCAAAGCCTCTAGAAACAGACCTGAAACCTGGTCACATAAAT
CTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCTTCAAAGGAAGATGGGTCTGAGAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAGAAAAAGGTTATCAC
AGCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTTAAGTTGCCATGGTACCTTGAGAAGCCTGGGAATGATGATGCTGAGAGTAATGATAATG
AAGGATCATCAAGAGCAGTGAATGTAAAAAAGGGAGAAAAGAAGACATTGGAAGAATTGAGGGCCGAGCGTCTCAAACGAGAGCAGAAGGAAAAGGGAAGGGAGCGTGCT
TTAATTGCGGAGAGAAATCGAAAGAGTAGAACAACAGCTCCAAGGGAAGGGGATTCTTCATCCAGGAGGTGGAAATCAAGAAGATGAGACTCAGGTTTCGGGATTATGAT
TTCATCTTTGTCTTAGCTCGCAGTGCTTGAAGTGCAAATTCCAAAGTGTAAAATGTAATTTGCATCATATAATGGAAGATGCATTTCAAAGCTTTTAAATGAAAAATCAA
ACGGTTGTTGTTTGCTCAAAGCTCTCCAAAAAAGGTTAGATTATGTGTGGGGGAATTGTGATCTGACCCTTGTGGAATTTGCAACTTTACGGTTCATATGGACAAAATTT
ATGATCGAAGAGAAGGTTCATCAATTTTGATGTTGTGTAAGTTGAAATAGATTCAATATTGTTGAAAAACACGTTCTGTTCTGTGCCTGCGATGAACGCAGCCTGCAACA
TTTTTACAATCAATTCGTTTGTGG

Protein sequence

Show/hide protein sequence

MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAKGLAPVVTDTAKPLETDLKPGHINLFEGIKIFDPVKGSSKEDGSEKKKRMK
KEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLEKPGNDDAESNDNEGSSRAVNVKKGEKKTLEELRAERLKREQKEKGRERALIAERNRKSRTTAPREGDSSSRRWKSR
R

Sed0012351 (gene) of Chayote v1 genome