; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012354 (gene) of Chayote v1 genome

Gene IDSed0012354
OrganismSechium edule (Chayote v1)
DescriptionAB hydrolase-1 domain-containing protein
Genome locationLG03:44836897..44837651
RNA-Seq ExpressionSed0012354
SyntenySed0012354
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG59671.1 hypothetical protein EZV62_014244 [Acer yangbiense]9.3e-4145.96Show/hide
Query:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK
        PF N +     +KLD  NY LWK+MV  V+ G  + GYL GT   PP+ I  E  A+         NP+YE +V  D  L+ WLYGSMT SVA  ++   
Subjt:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK

Query:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL
        TS  +W ALE++YGA +K+++N ++ S+QT RK  + M EYL  MK   D L +AG+P  E  LIS+VL+GLDA+Y+P++  I S+E ISW EL  TL
Subjt:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL

TXG72772.1 hypothetical protein EZV62_001351 [Acer yangbiense]2.1e-4045.45Show/hide
Query:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK
        P  N +     +KLD  NY LWK MV  V+ G  + GYL GT   PP+ I  E  A+       I NP+YE +V  D  L+ WLYGSMT SVA  ++   
Subjt:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK

Query:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL
        TS  +W ALE++YGA +K+++N ++ ++QTTRK  + M EYL  MK   D L + G+P  E  LIS+VL+GLDA+Y+P++  I S+E ISW EL  TL
Subjt:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]9.6e-4650.5Show/hide
Query:  AGSSSSNTIGVPTI-PIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARI----TNPDYESFVATDQSLLAWL
        +GS+++N+        I+  F +PLS+ LTVKLD+KNY LWK MVLAV+ GQ + GY+L T + P K     +D  +     NP YE + A DQ+   WL
Subjt:  AGSSSSNTIGVPTI-PIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARI----TNPDYESFVATDQSLLAWL

Query:  YGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQIN
        +GSMTPS+A D++NL+TS EVW ALE ++G+ +KARINQL+ SLQ T+K  MKM  YL  MKQ  + L LAGEP+  S L S +LTG +AEYLP++C I 
Subjt:  YGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQIN

Query:  SK
         K
Subjt:  SK

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]7.1e-5755.67Show/hide
Query:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD
        P+   +  F +PL +VLTVKLD+KNY LW+ MVLAV+ GQ   GY+LGT++KPP+ +V     G +D    NP+Y  + A DQ+LL WL+GSMTPS+A D
Subjt:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD

Query:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH
        +++ ++S+EVWKALED+YGA +KARINQL+  LQ T+KN +KM+EYL  MKQ  +SL LAGEP+  + L+S VL+GL+AEYLP++CQI  K+  SW EL 
Subjt:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH

Query:  ATL
        ATL
Subjt:  ATL

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]7.1e-5755.67Show/hide
Query:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD
        P+   +  F +PL +VLTVKLD+KNY LW+ MVLAV+ GQ   GY+LGT++KPP+ +V     G +D    NP+Y  + A DQ+LL WL+GSMTPS+A D
Subjt:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD

Query:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH
        +++ ++S+EVWKALED+YGA +KARINQL+  LQ T+KN +KM+EYL  MKQ  +SL LAGEP+  + L+S VL+GL+AEYLP++CQI  K+  SW EL 
Subjt:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH

Query:  ATL
        ATL
Subjt:  ATL

TrEMBL top hitse value%identityAlignment
A0A5C7HRI6 Uncharacterized protein4.5e-4145.96Show/hide
Query:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK
        PF N +     +KLD  NY LWK+MV  V+ G  + GYL GT   PP+ I  E  A+         NP+YE +V  D  L+ WLYGSMT SVA  ++   
Subjt:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK

Query:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL
        TS  +W ALE++YGA +K+++N ++ S+QT RK  + M EYL  MK   D L +AG+P  E  LIS+VL+GLDA+Y+P++  I S+E ISW EL  TL
Subjt:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL

A0A5C7IW79 Chitin-binding type-1 domain-containing protein1.0e-4045.45Show/hide
Query:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK
        P  N +     +KLD  NY LWK MV  V+ G  + GYL GT   PP+ I  E  A+       I NP+YE +V  D  L+ WLYGSMT SVA  ++   
Subjt:  PFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDAR-------ITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK

Query:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL
        TS  +W ALE++YGA +K+++N ++ ++QTTRK  + M EYL  MK   D L + G+P  E  LIS+VL+GLDA+Y+P++  I S+E ISW EL  TL
Subjt:  TSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like4.6e-4650.5Show/hide
Query:  AGSSSSNTIGVPTI-PIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARI----TNPDYESFVATDQSLLAWL
        +GS+++N+        I+  F +PLS+ LTVKLD+KNY LWK MVLAV+ GQ + GY+L T + P K     +D  +     NP YE + A DQ+   WL
Subjt:  AGSSSSNTIGVPTI-PIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARI----TNPDYESFVATDQSLLAWL

Query:  YGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQIN
        +GSMTPS+A D++NL+TS EVW ALE ++G+ +KARINQL+ SLQ T+K  MKM  YL  MKQ  + L LAGEP+  S L S +LTG +AEYLP++C I 
Subjt:  YGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQIN

Query:  SK
         K
Subjt:  SK

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X23.4e-5755.67Show/hide
Query:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD
        P+   +  F +PL +VLTVKLD+KNY LW+ MVLAV+ GQ   GY+LGT++KPP+ +V     G +D    NP+Y  + A DQ+LL WL+GSMTPS+A D
Subjt:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD

Query:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH
        +++ ++S+EVWKALED+YGA +KARINQL+  LQ T+KN +KM+EYL  MKQ  +SL LAGEP+  + L+S VL+GL+AEYLP++CQI  K+  SW EL 
Subjt:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH

Query:  ATL
        ATL
Subjt:  ATL

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X13.4e-5755.67Show/hide
Query:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD
        P+   +  F +PL +VLTVKLD+KNY LW+ MVLAV+ GQ   GY+LGT++KPP+ +V     G +D    NP+Y  + A DQ+LL WL+GSMTPS+A D
Subjt:  PTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIV-----GENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYD

Query:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH
        +++ ++S+EVWKALED+YGA +KARINQL+  LQ T+KN +KM+EYL  MKQ  +SL LAGEP+  + L+S VL+GL+AEYLP++CQI  K+  SW EL 
Subjt:  IINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELH

Query:  ATL
        ATL
Subjt:  ATL

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.4e-1730Show/hide
Query:  KLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKA
        KL   NY++W   V A+  G  + G+L G+ + PP  I G + A   NPDY  +   D+ + + + G+++ SV   +    T+ ++W+ L  IY   +  
Subjt:  KLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKA

Query:  RINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWL-ELHATL
         + QL+  L+   K    +++Y+  +    D L L G+P++    +  VL  L  EY PVI QI +K+    L E+H  L
Subjt:  RINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWL-ELHATL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.2e-1227.78Show/hide
Query:  KLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKA
        KL   NY++W   V A+  G  + G+L G+   PP  I G +     NPDY  +   D+ + + + G+++ SV   +    T+ ++W+ L  IY   +  
Subjt:  KLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLKTSKEVWKALEDIYGAANKA

Query:  RINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKE-KISWLELHATL
         + QL+               ++T      D L L G+P++    +  VL  L  +Y PVI QI +K+   S  E+H  L
Subjt:  RINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKE-KISWLELHATL

Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)6.9e-1024.15Show/hide
Query:  GVPTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTP-SVAYDII
        GV  I  H P        + + ++E NY  W+ + L      +++G++ GT+               TN +  ++   D  +   LYG++TP       +
Subjt:  GVPTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTP-SVAYDII

Query:  NLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHAT
           TS+++W  +++ +     AR  +L   L+T     M++ +Y   MK+L DSL     P+ + +L+  VL GL+ ++  +I  I  ++     +  AT
Subjt:  NLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHAT

Query:  LELQSRE
        + LQ  E
Subjt:  LELQSRE

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)1.6e-1123.96Show/hide
Query:  LTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK-TSKEVWKALEDIYGA
        +T+ L++ NY +W+ +   +     ++G++ G+ +  P                + +   D  +  W+YG++T S+   II +  T++++W +LE+++  
Subjt:  LTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVAYDIINLK-TSKEVWKALEDIYGA

Query:  ANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKI-SWLELHATLELQSREKS
          +AR  Q +  L+TT  + + ++EY   +K L D LT    PI++  L+  +L GL  +Y  ++  I  K    S+ E  + L ++    S
Subjt:  ANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKI-SWLELHATLELQSREKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATCCTCCTCCTCAAACACCATTGGAGTACCAACCATTCCAATCCATGCTCCTTTCAATAATCCTCTTAGCTCTGTGTTGACAGTCAAACTTGATGAA
AAAAATTATATTCTTTGGAAATCAATGGTATTGGCTGTTGTTTGTGGACAAAATATTATCGGTTATCTTTTGGGAACAATATCCAAGCCACCTAAAGTTATTGTA
GGAGAAAATGATGCTCGTATCACAAATCCAGACTATGAATCCTTCGTTGCAACCGATCAATCACTTTTAGCCTGGCTCTACGGATCCATGACACCTTCAGTAGCA
TACGACATAATAAATCTAAAAACCTCAAAAGAGGTGTGGAAGGCCCTTGAAGATATATATGGTGCAGCAAACAAAGCACGGATCAATCAACTCAAAAGAAGTTTG
CAAACAACAAGAAAAAATCAAATGAAGATGAATGAATATTTGACAACAATGAAGCAACTTGGAGATAGCCTTACTCTAGCAGGTGAACCTATCAATGAAAGTTCA
TTAATATCAAGTGTGCTAACTGGTCTTGATGCAGAATATTTGCCAGTCATTTGTCAAATTAATAGCAAGGAGAAAATATCATGGCTCGAACTACATGCTACCCTC
GAACTTCAATCAAGGGAAAAATCAACATCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATCCTCCTCCTCAAACACCATTGGAGTACCAACCATTCCAATCCATGCTCCTTTCAATAATCCTCTTAGCTCTGTGTTGACAGTCAAACTTGATGAA
AAAAATTATATTCTTTGGAAATCAATGGTATTGGCTGTTGTTTGTGGACAAAATATTATCGGTTATCTTTTGGGAACAATATCCAAGCCACCTAAAGTTATTGTA
GGAGAAAATGATGCTCGTATCACAAATCCAGACTATGAATCCTTCGTTGCAACCGATCAATCACTTTTAGCCTGGCTCTACGGATCCATGACACCTTCAGTAGCA
TACGACATAATAAATCTAAAAACCTCAAAAGAGGTGTGGAAGGCCCTTGAAGATATATATGGTGCAGCAAACAAAGCACGGATCAATCAACTCAAAAGAAGTTTG
CAAACAACAAGAAAAAATCAAATGAAGATGAATGAATATTTGACAACAATGAAGCAACTTGGAGATAGCCTTACTCTAGCAGGTGAACCTATCAATGAAAGTTCA
TTAATATCAAGTGTGCTAACTGGTCTTGATGCAGAATATTTGCCAGTCATTTGTCAAATTAATAGCAAGGAGAAAATATCATGGCTCGAACTACATGCTACCCTC
GAACTTCAATCAAGGGAAAAATCAACATCATGGTGA
Protein sequenceShow/hide protein sequence
MAGSSSSNTIGVPTIPIHAPFNNPLSSVLTVKLDEKNYILWKSMVLAVVCGQNIIGYLLGTISKPPKVIVGENDARITNPDYESFVATDQSLLAWLYGSMTPSVA
YDIINLKTSKEVWKALEDIYGAANKARINQLKRSLQTTRKNQMKMNEYLTTMKQLGDSLTLAGEPINESSLISSVLTGLDAEYLPVICQINSKEKISWLELHATL
ELQSREKSTSW