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Sed0012373 (gene) of Chayote v1 genome

Gene IDSed0012373
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:19364358..19364840
RNA-Seq ExpressionSed0012373
SyntenySed0012373
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040704.1 hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa]3.5e-0538.2Show/hide
Query:  VANIADSVCLELANFAVVERCK-IVGPTLRLKGILSGTITVGPDGKTYRLTLQVEVYVDGFWVCKTHRVEIFVPWAGVP-RLSSFECIE
        + N  DS+ LE+    V+  C+ I+G   + +GI+ G   VGP+GKTY L L+++V +   +V K   V+ F P+ G+P  L SFE +E
Subjt:  VANIADSVCLELANFAVVERCK-IVGPTLRLKGILSGTITVGPDGKTYRLTLQVEVYVDGFWVCKTHRVEIFVPWAGVP-RLSSFECIE
TrEMBL top hitse value%identityAlignment
A0A5D3BPM4 Uncharacterized protein1.7e-0538.2Show/hide
Query:  VANIADSVCLELANFAVVERCK-IVGPTLRLKGILSGTITVGPDGKTYRLTLQVEVYVDGFWVCKTHRVEIFVPWAGVP-RLSSFECIE
        + N  DS+ LE+    V+  C+ I+G   + +GI+ G   VGP+GKTY L L+++V +   +V K   V+ F P+ G+P  L SFE +E
Subjt:  VANIADSVCLELANFAVVERCK-IVGPTLRLKGILSGTITVGPDGKTYRLTLQVEVYVDGFWVCKTHRVEIFVPWAGVP-RLSSFECIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCGGACTTGTTACAGGACTTGTAGGAGCTGCAGCAGGAGTTGCGGTCGGAGTTGCCGGAGCTGCCCTACATGTCGGTTCTCAAGTGGTCGAGACTGTTGCGAA
TATCGCCGACTCAGTGTGTTTAGAGTTGGCAAATTTTGCAGTAGTCGAGCGTTGCAAGATCGTCGGCCCTACTCTTAGGTTGAAGGGTATATTGAGTGGAACGATTACAG
TCGGGCCGGATGGGAAGACCTATCGCCTTACGCTACAAGTCGAAGTATATGTTGATGGCTTTTGGGTATGTAAGACCCATCGAGTTGAGATATTTGTTCCATGGGCCGGC
GTCCCTAGGCTCTCATCTTTCGAATGTATCGAAGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
CAAGTTTTTCAACAAAGCCAAAGCTAAAGGTAAGAATGACTCTCGGACTTGTTACAGGACTTGTAGGAGCTGCAGCAGGAGTTGCGGTCGGAGTTGCCGGAGCTGCCCTA
CATGTCGGTTCTCAAGTGGTCGAGACTGTTGCGAATATCGCCGACTCAGTGTGTTTAGAGTTGGCAAATTTTGCAGTAGTCGAGCGTTGCAAGATCGTCGGCCCTACTCT
TAGGTTGAAGGGTATATTGAGTGGAACGATTACAGTCGGGCCGGATGGGAAGACCTATCGCCTTACGCTACAAGTCGAAGTATATGTTGATGGCTTTTGGGTATGTAAGA
CCCATCGAGTTGAGATATTTGTTCCATGGGCCGGCGTCCCTAGGCTCTCATCTTTCGAATGTATCGAAGTCAACTAACCTATCTACTTGCTTATGATGCATACCCTACTA
TGTATGGTCTATTATCTGCCAATAGAATAAAACTATCTTTATT
Protein sequenceShow/hide protein sequence
MTLGLVTGLVGAAAGVAVGVAGAALHVGSQVVETVANIADSVCLELANFAVVERCKIVGPTLRLKGILSGTITVGPDGKTYRLTLQVEVYVDGFWVCKTHRVEIFVPWAG
VPRLSSFECIEVN