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Sed0012398 (gene) of Chayote v1 genome

Gene IDSed0012398
OrganismSechium edule (Chayote v1)
DescriptionProtein FAF-like
Genome locationLG13:26079269..26080030
RNA-Seq ExpressionSed0012398
SyntenySed0012398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602047.1 hypothetical protein SDJN03_07280, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1130.42Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG---------------------------------KQFPP
        +K LIS EE    KG++ + ++   +  +R + +  + SSSF NSIRS N  +DDLIGTESG                                 K+FPP
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG---------------------------------KQFPP

Query:  LIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------------------
         IPFL     H+ RP WIL RN +DGRLIL LER                                                                  
Subjt:  LIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------------------

Query:  -SFTY-GGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
         SF + GGG      M  D   FCGVNGN   RHV+HG F
Subjt:  -SFTY-GGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

KAG7016541.1 hypothetical protein SDJN02_21650, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-0932.26Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------
        +K LIS +E+    GQ   E +D+VI R  G     S LLT SSS  +SI SCNL +DDLIGTESG                                  
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------

Query:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------
               KQFPP IP L      +TR  WIL R   D RLILKLER                                                      
Subjt:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------

Query:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
                  SFTY GG+  D G++ D + FCGVNGN E RHV+H  F
Subjt:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

KAG7032741.1 hypothetical protein SDJN02_06791, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1130.67Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG---------------------------------KQFPP
        +K LIS EE    KG++ + ++   +  +R + +  + SSSF NSIRS N  +DDLIGTESG                                 K+FPP
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG---------------------------------KQFPP

Query:  LIPFL----WHKTRPWWILARNSMDGRLILKLERSFTY------------------------GGGDNDDDGMYF--------------------DWEW--
         IPFL     H+ RP WIL RN +DGRLIL LER   +                        G  D DD  + F                    D E+  
Subjt:  LIPFL----WHKTRPWWILARNSMDGRLILKLERSFTY------------------------GGGDNDDDGMYF--------------------DWEW--

Query:  --------------------FCGVNGNFEGRHVIHGTF
                            FCGVNGN   RHV+HG F
Subjt:  --------------------FCGVNGNFEGRHVIHGTF

XP_022939162.1 uncharacterized protein LOC111445156 [Cucurbita moschata]1.8e-0932.26Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------
        +K LIS +E+    GQ   E +D+VI R  G     S LLT SSS  +SI SCNL +DDLIGTESG                                  
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------

Query:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------
               KQFPP IP L      +TR  WIL R   D RLILKLER                                                      
Subjt:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------

Query:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
                  SFTY GG+  D G++ D + FCGVNGN E RHV+H  F
Subjt:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

XP_023551345.1 uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo]1.0e-0930.08Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRV------------RGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG--------------------------
        +K LIS EE+    GQ   E +D+VI                  S+  + SSS  +SI SCNL +DDLIGTESG                          
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRV------------RGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESG--------------------------

Query:  ---------------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER----------------------------------------------
                       KQFPP IP L      +TR  WIL R   D RLILKLER                                              
Subjt:  ---------------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER----------------------------------------------

Query:  ------------------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
                          SFTY GG+  D G++ D + FCGVNGN E RHV+HG F
Subjt:  ------------------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

TrEMBL top hitse value%identityAlignment
A0A0A0KRM2 Uncharacterized protein6.8e-0728.95Show/hide
Query:  MSPEIKTLISPEEQQDLKGQQPKEMKDQVIHRVR---GRSNLLTRSSS---------------FFNSIRSCNLFIDDLIGTESG----------------
        +S  +K+LIS ++Q           +D VI  V     RSNLLT SSS                F+SIRSCN  +DDLIGTESG                
Subjt:  MSPEIKTLISPEEQQDLKGQQPKEMKDQVIHRVR---GRSNLLTRSSS---------------FFNSIRSCNLFIDDLIGTESG----------------

Query:  ----------------------KQFPPLIPFL-----WHKTRPWWILARNSMDGRLILKLE---------------------------------------
                              KQFPP IPF+      ++ R  W+L R   + RLILKLE                                       
Subjt:  ----------------------KQFPPLIPFL-----WHKTRPWWILARNSMDGRLILKLE---------------------------------------

Query:  --------------------------RSFTYGG-GDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
                                  RS+TYGG G     GM      FCG NGNFE RHV+HG F
Subjt:  --------------------------RSFTYGG-GDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

A0A5D3DS64 Protein FAF-like4.1e-0427.69Show/hide
Query:  IRSCNLFIDDLIGTESG--------------------------------------KQFPPLIPFL-----WHKTRPWWILARNSMDGRLILKLER-----
        IRSCN  +DDLIGTESG                                      KQ+PP IPF+      ++ R  WIL R   + RLILKLER     
Subjt:  IRSCNLFIDDLIGTESG--------------------------------------KQFPPLIPFL-----WHKTRPWWILARNSMDGRLILKLER-----

Query:  -----------------------------------------------------------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHG
                                                                   S TYGG      G       FCGVNGNFE RHV+HG
Subjt:  -----------------------------------------------------------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHG

A0A6J1CJZ0 uncharacterized protein LOC1110118615.8e-0639.16Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------
        +K LIS EE ++       E K Q + R  G    RS LLT SSS  +SIRSC L +DDLIGTESG                                  
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------

Query:  ----KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER
            KQFPP I FL      +TRP W+L R+  DGRL L LER
Subjt:  ----KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER

A0A6J1FG13 uncharacterized protein LOC1114451568.6e-1032.26Show/hide
Query:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------
        +K LIS +E+    GQ   E +D+VI R  G     S LLT SSS  +SI SCNL +DDLIGTESG                                  
Subjt:  IKTLISPEEQQDLKGQQPKEMKDQVIHRVRG----RSNLLTRSSSFFNSIRSCNLFIDDLIGTESG----------------------------------

Query:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------
               KQFPP IP L      +TR  WIL R   D RLILKLER                                                      
Subjt:  -------KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER------------------------------------------------------

Query:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
                  SFTY GG+  D G++ D + FCGVNGN E RHV+H  F
Subjt:  ----------SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

A0A6J1JWW3 uncharacterized protein LOC1114890654.9e-0533.33Show/hide
Query:  KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER-------------------------------------------------------------
        KQFPP IP L      +TR  WIL R   D RLILKLER                                                             
Subjt:  KQFPPLIPFL----WHKTRPWWILARNSMDGRLILKLER-------------------------------------------------------------

Query:  ---SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF
           SFTY GGD  D G++ D + FCGVNGN E RHV+HG F
Subjt:  ---SFTYGGGDNDDDGMYFDWEWFCGVNGNFEGRHVIHGTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCGAAATCAAAACCCTAATTTCTCCTGAAGAACAGCAAGATCTTAAAGGTCAACAACCAAAAGAAATGAAAGATCAAGTCATTCACAGAGTTCGAGGCAGGTC
AAACCTGTTGACTCGTTCCTCTTCTTTTTTTAATTCCATCAGATCTTGCAATTTGTTCATAGACGATTTGATCGGGACTGAGAGCGGAAAGCAGTTTCCACCGCTGATTC
CATTTCTATGGCATAAAACTCGGCCGTGGTGGATTTTAGCGAGAAATTCCATGGATGGACGATTGATTTTGAAACTGGAGAGAAGTTTTACATACGGCGGCGGCGACAAC
GACGACGACGGAATGTATTTTGATTGGGAATGGTTTTGCGGTGTAAATGGGAATTTCGAGGGACGACATGTCATCCATGGGACATTTCGGTTCGACTCCTCTTCATCCTT
TTTGATTCGGCTCCTAGCATTTTTTTTTAAACAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCGAAATCAAAACCCTAATTTCTCCTGAAGAACAGCAAGATCTTAAAGGTCAACAACCAAAAGAAATGAAAGATCAAGTCATTCACAGAGTTCGAGGCAGGTC
AAACCTGTTGACTCGTTCCTCTTCTTTTTTTAATTCCATCAGATCTTGCAATTTGTTCATAGACGATTTGATCGGGACTGAGAGCGGAAAGCAGTTTCCACCGCTGATTC
CATTTCTATGGCATAAAACTCGGCCGTGGTGGATTTTAGCGAGAAATTCCATGGATGGACGATTGATTTTGAAACTGGAGAGAAGTTTTACATACGGCGGCGGCGACAAC
GACGACGACGGAATGTATTTTGATTGGGAATGGTTTTGCGGTGTAAATGGGAATTTCGAGGGACGACATGTCATCCATGGGACATTTCGGTTCGACTCCTCTTCATCCTT
TTTGATTCGGCTCCTAGCATTTTTTTTTAAACAAGGGTAA
Protein sequenceShow/hide protein sequence
MSPEIKTLISPEEQQDLKGQQPKEMKDQVIHRVRGRSNLLTRSSSFFNSIRSCNLFIDDLIGTESGKQFPPLIPFLWHKTRPWWILARNSMDGRLILKLERSFTYGGGDN
DDDGMYFDWEWFCGVNGNFEGRHVIHGTFRFDSSSSFLIRLLAFFFKQG