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Sed0012405 (gene) of Chayote v1 genome

Gene IDSed0012405
OrganismSechium edule (Chayote v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationLG11:32591738..32592457
RNA-Seq ExpressionSed0012405
SyntenySed0012405
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]5.0e-3246.46Show/hide
Query:  MISSHSNMFVGACGLILLGVHLTIYQTDARKVFVGDKVNYGM--LPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKK
        M+S  +N+F  AC LI LG+H  IY T+A++ FV D+ N  +  + +G  I  + P +      P P  +P       P  + GIL KG R PPS  S+ 
Subjt:  MISSHSNMFVGACGLILLGVHLTIYQTDARKVFVGDKVNYGM--LPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKK

Query:  TSDYSPPPLHVPSVILKEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPP---HASSLV
        TS+  P P   P ++ KE +VNFGILPKG+RIPPS PS++TSD PPP  +  S+  KE  + +GILPKGVRIPPS PS++ SDY PPPP   HA S++
Subjt:  TSDYSPPPLHVPSVILKEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPP---HASSLV

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5868.21Show/hide
Query:  KVNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDY-SPPPLHVPSVILKEQ-VVNFGILPKGIRIPPSE
        K+N+GMLPKG+PIPPSGPSQRTSD PPPPP   S IL K+  +NFG+LPKG  IPPS PS++TS+Y  PPPLH  SVIL  Q  +NFG+LPKG+ IPPS 
Subjt:  KVNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDY-SPPPLHVPSVILKEQ-VVNFGILPKGIRIPPSE

Query:  PSKKTSDYPPPPPHVPSVILKEQ-VVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP
        PS++TSDYPPPPPH  S IL  Q  +NFG+LPKGV IPPS PSQ+TSDY PPPPHASS++LN + KI+FGM+P
Subjt:  PSKKTSDYPPPPPHVPSVILKEQ-VVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]2.4e-5062.72Show/hide
Query:  YGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKK
        +GMLPKG+PIPPS PSQRTSD PPPPP   S IL K   +N G+LP+G  IPPS PS++TSDY PPP H  SVIL K+  +NFG+LPKG+ IPPS PS++
Subjt:  YGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKK

Query:  TSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP
        TS YPPPPP   SVIL K+  +  G+LP+GV IPP   SQ+TSDY  PPPHASS++LN + KI+FGM+P
Subjt:  TSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP

XP_031744042.1 proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]1.9e-3148.5Show/hide
Query:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPS
        +N+G+LPKG+P   SGPSQR SD PP PP  PS +L KE  + FGILPKG     S PS++ SD  PPP   PS++L KE  +NFGIL KG+R   S PS
Subjt:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPS

Query:  KKTSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMPLSPNALSANLEKESSFNVGVHRRAPVPPS
        ++ SD PPPPP  PS++L KE  +NFGILPKGV    S PS++ SD  P PP   S+VL+ +  I FG++    + LS+   +  S         P PPS
Subjt:  KKTSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMPLSPNALSANLEKESSFNVGVHRRAPVPPS

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]5.7e-3650Show/hide
Query:  SHSNMFVGACGLILLGVHLTIYQTDARKVFVGDK-------------------------------------VNYGMLPKGIPIPPSGPSQRTSDDPPPPP
        S+SN+F GAC  I LG+H TIYQTDA+ VFV +K                                      N G+L K   +PPSG SQ TSD+PPPPP
Subjt:  SHSNMFVGACGLILLGVHLTIYQTDARKVFVGDK-------------------------------------VNYGMLPKGIPIPPSGPSQRTSDDPPPPP

Query:  HVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVI
        HV S IL KE  +NF +L KG RIPPS PS++TS+  PPP H  SVIL K+  +NFGILPK + IPPS PSK+ S+YP PP H PSVI
Subjt:  HVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVI

TrEMBL top hitse value%identityAlignment
A0A5D2FCQ6 Uncharacterized protein9.5e-2951.74Show/hide
Query:  NYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPP-LHVPSVILKEQVVNFGILPKGIRIPPSEPSK
        N+ ++P G+PIPPSGPS  TSD PPPP    S+ L K    NF ILP G  IPP  PS  T D  PPP +   S +LK    NF ILP G+ IPPS PS 
Subjt:  NYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPP-LHVPSVILKEQVVNFGILPKGIRIPPSEPSK

Query:  KTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMPLSP
         TSD PPPPP + + +LK    NF ILP GV IPPS PS+ TS   PPPP   S  L+    ++FGM+P SP
Subjt:  KTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMPLSP

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like2.4e-3246.46Show/hide
Query:  MISSHSNMFVGACGLILLGVHLTIYQTDARKVFVGDKVNYGM--LPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKK
        M+S  +N+F  AC LI LG+H  IY T+A++ FV D+ N  +  + +G  I  + P +      P P  +P       P  + GIL KG R PPS  S+ 
Subjt:  MISSHSNMFVGACGLILLGVHLTIYQTDARKVFVGDKVNYGM--LPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKK

Query:  TSDYSPPPLHVPSVILKEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPP---HASSLV
        TS+  P P   P ++ KE +VNFGILPKG+RIPPS PS++TSD PPP  +  S+  KE  + +GILPKGVRIPPS PS++ SDY PPPP   HA S++
Subjt:  TSDYSPPPLHVPSVILKEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPP---HASSLV

A0A6A4PCZ2 Uncharacterized protein6.0e-3152.94Show/hide
Query:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVILKE-QVVNFGILPKGIRIPPSEPS
        +NYGMLPKG+P+PPSGPS +TSD PPPPP      ++    +NFG+LPKG R PPS PS KTSD  PPP   P   ++    +NFG+LPKG   PPS  S
Subjt:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVILKE-QVVNFGILPKGIRIPPSEPS

Query:  KKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP
         KTSD PPPPP           +NFG+LPKG   PPS  S KTSD  PPPP   +  L+N   I+FGM+P
Subjt:  KKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP

A0A6A5P9E6 Uncharacterized protein6.0e-3152.94Show/hide
Query:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVILKE-QVVNFGILPKGIRIPPSEPS
        +NYGMLPKG+P+PPSGPS +TSD PPPPP      ++    +NFG+LPKG R PPS PS KTSD  PPP   P   ++    +NFG+LPKG   PPS  S
Subjt:  VNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVILKE-QVVNFGILPKGIRIPPSEPS

Query:  KKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP
         KTSD PPPPP           +NFG+LPKG   PPS  S KTSD  PPPP   +  L+N   I+FGM+P
Subjt:  KKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.2e-5062.72Show/hide
Query:  YGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKK
        +GMLPKG+PIPPS PSQRTSD PPPPP   S IL K   +N G+LP+G  IPPS PS++TSDY PPP H  SVIL K+  +NFG+LPKG+ IPPS PS++
Subjt:  YGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVPSVIL-KEQVVNFGILPKGIRIPPSEPSKK

Query:  TSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP
        TS YPPPPP   SVIL K+  +  G+LP+GV IPP   SQ+TSDY  PPPHASS++LN + KI+FGM+P
Subjt:  TSDYPPPPPHVPSVIL-KEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCAAGTCATTCCAACATGTTTGTGGGGGCTTGTGGTCTCATACTCCTAGGGGTTCACCTTACAATCTACCAAACGGATGCTAGAAAAGTTTTTGTAGGTGACAA
AGTAAACTATGGAATGTTACCAAAAGGCATACCTATTCCTCCTTCTGGACCGAGTCAAAGAACATCGGACGATCCCCCACCGCCGCCACATGTTCCATCCGCCATTTTAA
AGAAAGAACCTATGGTCAATTTTGGAATATTACCAAAAGGTAAACGTATTCCTCCATCGGAGCCCAGCAAAAAAACATCGGACTATTCCCCACCACCACTACACGTTCCA
TCCGTCATTTTGAAAGAACAAGTGGTCAACTTTGGAATATTACCAAAAGGCATACGTATTCCTCCATCGGAGCCGAGCAAAAAAACATCAGACTATCCTCCACCACCACC
ACACGTTCCATCCGTCATTTTAAAAGAACAAGTGGTCAACTTTGGAATATTACCAAAAGGTGTACGTATTCCTCCATCTGAGCCGAGTCAAAAGACGTCCGACTATCTAC
CTCCCCCACCACATGCCTCATCCCTTGTCTTAAATAATGAACCTAAGATCGATTTTGGAATGATGCCACTTTCACCAAATGCCCTTTCCGCTAATTTAGAGAAAGAATCA
AGTTTTAATGTTGGGGTGCATCGTAGAGCACCTGTTCCACCGTCTGCACGAAATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATATCAAGTCATTCCAACATGTTTGTGGGGGCTTGTGGTCTCATACTCCTAGGGGTTCACCTTACAATCTACCAAACGGATGCTAGAAAAGTTTTTGTAGGTGACAA
AGTAAACTATGGAATGTTACCAAAAGGCATACCTATTCCTCCTTCTGGACCGAGTCAAAGAACATCGGACGATCCCCCACCGCCGCCACATGTTCCATCCGCCATTTTAA
AGAAAGAACCTATGGTCAATTTTGGAATATTACCAAAAGGTAAACGTATTCCTCCATCGGAGCCCAGCAAAAAAACATCGGACTATTCCCCACCACCACTACACGTTCCA
TCCGTCATTTTGAAAGAACAAGTGGTCAACTTTGGAATATTACCAAAAGGCATACGTATTCCTCCATCGGAGCCGAGCAAAAAAACATCAGACTATCCTCCACCACCACC
ACACGTTCCATCCGTCATTTTAAAAGAACAAGTGGTCAACTTTGGAATATTACCAAAAGGTGTACGTATTCCTCCATCTGAGCCGAGTCAAAAGACGTCCGACTATCTAC
CTCCCCCACCACATGCCTCATCCCTTGTCTTAAATAATGAACCTAAGATCGATTTTGGAATGATGCCACTTTCACCAAATGCCCTTTCCGCTAATTTAGAGAAAGAATCA
AGTTTTAATGTTGGGGTGCATCGTAGAGCACCTGTTCCACCGTCTGCACGAAATGGATAG
Protein sequenceShow/hide protein sequence
MISSHSNMFVGACGLILLGVHLTIYQTDARKVFVGDKVNYGMLPKGIPIPPSGPSQRTSDDPPPPPHVPSAILKKEPMVNFGILPKGKRIPPSEPSKKTSDYSPPPLHVP
SVILKEQVVNFGILPKGIRIPPSEPSKKTSDYPPPPPHVPSVILKEQVVNFGILPKGVRIPPSEPSQKTSDYLPPPPHASSLVLNNEPKIDFGMMPLSPNALSANLEKES
SFNVGVHRRAPVPPSARNG