; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012420 (gene) of Chayote v1 genome

Gene IDSed0012420
OrganismSechium edule (Chayote v1)
Descriptionribonuclease P protein subunit p25-like protein
Genome locationLG01:18406297..18410073
RNA-Seq ExpressionSed0012420
SyntenySed0012420
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136371.1 ribonuclease P protein subunit p25-like protein [Cucumis sativus]1.2e-12491.35Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELNKSSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDG+W+RNRGGN RGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQD-FPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GRSGGNFRGRGRGGYNGPQFD QQD GYNQD  P QGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQD-FPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

XP_022975826.1 ribonuclease P protein subunit p25-like protein isoform X1 [Cucurbita maxima]2.1e-12490.57Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGR+GRGRSRGRGPPGNGFV NEYDDG+W+RNRGGN RGR  R
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GR GGNFRGRGRGGYNGPQFD QQD GYNQDFPPQGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

XP_022975827.1 ribonuclease P protein subunit p25-like protein isoform X2 [Cucurbita maxima]2.1e-12490.57Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGR+GRGRSRGRGPPGNGFV NEYDDG+W+RNRGGN RGR  R
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GR GGNFRGRGRGGYNGPQFD QQD GYNQDFPPQGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

XP_023525730.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo]4.7e-12490.19Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGR RGRNGRGR+RGRGPPGNG+V NEYDDG+W+RNRGGNVRGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GRSGGNFRGRGRGGYNGPQ+D QQD GYNQD P QGRGRGRG RGGFRGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

XP_038900199.1 ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]5.0e-12691.7Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELNKSSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDG+W+RNRGGN RGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GRSGGNFRGRGRGGYNGPQFD QQD GYNQD P QGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

TrEMBL top hitse value%identityAlignment
A0A0A0LJ75 Alba domain-containing protein6.0e-12591.35Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELNKSSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDG+W+RNRGGN RGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQD-FPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GRSGGNFRGRGRGGYNGPQFD QQD GYNQD  P QGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQD-FPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

A0A5A7V7U0 Ribonuclease P protein subunit p25-like protein isoform X16.7e-12491.35Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELNKSSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDG+W+RNRGGN RGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPP-QGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GRSGGNFRGRGRGGYNGPQFD  QD GYNQD PP QGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPP-QGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

A0A6J1F9Y5 ribonuclease P protein subunit p25-like protein2.3e-12490.6Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGR+GRGRSRGRGPPGNGFV NEYDDG+W+RNRGGN RGR GR
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSY-GGPIQVAA
        GR GGNFRGRGRGGYNGPQFD QQD GYNQDFPPQGRGRGRG RGG+RGRGRGF +  GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSY-GGPIQVAA

A0A6J1IFA1 ribonuclease P protein subunit p25-like protein isoform X11.0e-12490.57Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGR+GRGRSRGRGPPGNGFV NEYDDG+W+RNRGGN RGR  R
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GR GGNFRGRGRGGYNGPQFD QQD GYNQDFPPQGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

A0A6J1ILQ2 ribonuclease P protein subunit p25-like protein isoform X21.0e-12490.57Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRY RVEKPR ETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSI STDITDTWEPLEEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR
        TTRHVSMI ITLSK ELN SSVGYQPPLPAELVK  VEY YEGEGSPHDQGPGRGRGRGR+GRGRSRGRGPPGNGFV NEYDDG+W+RNRGGN RGR  R
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGR

Query:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA
        GR GGNFRGRGRGGYNGPQFD QQD GYNQDFPPQGRGRGRG RGG+RGRGRGF + GGPIQ AA
Subjt:  GRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA

SwissProt top hitse value%identityAlignment
Q2KIR4 Ribonuclease P protein subunit p25-like protein2.3e-1231.25Show/hide
Query:  PRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL--EEGLLPLETTRHVSM
        P  + P D  E+R+ +  ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GL+Q T +      D+W P   + GL PL    HV  
Subjt:  PRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL--EEGLLPLETTRHVSM

Query:  IAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSR
        + + LS+  L+ +  GYQPP                 G+P D GP      G   R R+R
Subjt:  IAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSR

Q5PPN2 Ribonuclease P protein subunit p253.5e-1334.19Show/hide
Query:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLP----------LETTRHVSMIAI
        +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +    + + W+ L  G  P          L   ++V  +AI
Subjt:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLP----------LETTRHVSMIAI

Query:  TLSKSELNKSSVGYQPP
         LSK  L+   +GYQPP
Subjt:  TLSKSELNKSSVGYQPP

Q8N5L8 Ribonuclease P protein subunit p25-like protein4.9e-1535.83Show/hide
Query:  PRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL--EEGLLPLETTRHVSM
        P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GLHQ T +      D+W P   + GL PL   RHV  
Subjt:  PRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL--EEGLLPLETTRHVSM

Query:  IAITLSKSELNKSSVGYQPP
        + + LS+  L+ +  GYQPP
Subjt:  IAITLSKSELNKSSVGYQPP

Q91WE3 Ribonuclease P protein subunit p253.5e-1334.19Show/hide
Query:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLP----------LETTRHVSMIAI
        +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +    + + W+ L  G  P          L   ++V  +AI
Subjt:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLP----------LETTRHVSMIAI

Query:  TLSKSELNKSSVGYQPP
         LSK  L+   +GYQPP
Subjt:  TLSKSELNKSSVGYQPP

Q99JH1 Ribonuclease P protein subunit p25-like protein1.3e-1534.56Show/hide
Query:  MDRYQR-------VEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL-
        M++Y+R          P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GLHQ T +      D+W P  
Subjt:  MDRYQR-------VEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPL-

Query:  -EEGLLPLETTRHVSMIAITLSKSELNKSSVGYQPP
         + GL PL   RHV  + + LS+  L+ S  GYQPP
Subjt:  -EEGLLPLETTRHVSMIAITLSKSELNKSSVGYQPP

Arabidopsis top hitse value%identityAlignment
AT1G20220.1 Alba DNA/RNA-binding protein3.0e-7660.69Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MD+YQRVEKP+ +TPI ENEIRITS GR RNYITYAM LLQE  SNE++FKAMGRAINK+VTIVELIKRRI GLHQ TSI STDITDTWEP EEGL  +E
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEG-EGSPHDQG-----PGRGRGRGRNGRGR----------SRGRGPPGNGFVANEYDDG
        TTRHVSMI ITLSK +LN SSVGYQ P+P E+VK   E  YEG +GSP  +G      GRGRGRGR GRG            RGRG  GNG+V NEYDDG
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEG-EGSPHDQG-----PGRGRGRGRNGRGR----------SRGRGPPGNGFVANEYDDG

Query:  EWERNRGG------------------NVRGRG-GRGRSGGNFRGRGRGGYNG---PQFDFQQDD---GYN----------QDFPPQGRGRGRGQRGGFRG
           R RGG                     GRG GRGR GG   GRGRGGYNG   P ++ QQD    GYN             PPQGRGRGRG+ G  RG
Subjt:  EWERNRGG------------------NVRGRG-GRGRSGGNFRGRGRGGYNG---PQFDFQQDD---GYN----------QDFPPQGRGRGRGQRGGFRG

Query:  RGR-GFN-SYGGPIQVAA
         GR GFN S G PIQ AA
Subjt:  RGR-GFN-SYGGPIQVAA

AT1G76010.1 Alba DNA/RNA-binding protein7.6e-8068.94Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MD+YQRV KP+ +TPID NEIRITSQGR RNYITYAMTLLQ+KGS E+VFKAMGRAINKTVTIVELIKRRI  LHQNTSI STDITDTWEP EEGLLPLE
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEG-EGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRG-GNVRGRG
        TTRHVSMI ITLSK ELN SSVGYQ P+P ELVK   +  YEG EGSP     GRGRGRGR GRGR RGRG  GN +V  E++DG WER +  G  RGR 
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVEYGYEG-EGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRG-GNVRGRG

Query:  GRGRSGGNFRGRGRGGYNGP--QFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGP
        GRGRS    RGRGRGGYNGP  ++D  QD GY  D P +   RG   RGG+    +G   Y GP
Subjt:  GRGRSGGNFRGRGRGGYNGP--QFDFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGP

AT3G07030.1 Alba DNA/RNA-binding protein6.7e-3644.29Show/hide
Query:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE
        MDRYQRV KP+ E+PI+ENEIRITS+G +RNYI+YA +LLQEK   +IV KAMG+AI+KTV I E++K +I GLHQ+ +ISS  ITD WEP EEGL P+E
Subjt:  MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVE-------------YGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWE
         TRHVSMI+ITLS SELNK S GYQ P  ++  K   +             YG EGE     +           G  + + +G      +      G   
Subjt:  TTRHVSMIAITLSKSELNKSSVGYQPPLPAELVKASVE-------------YGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWE

Query:  RNRGGNVRGR-----GGRGRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQ-GRGRGRGQRGG-FRGRGRGFN-SYGG
        R    +V        GGRG  GG  R  G GG     +  +++DGY +    + G GR  G  GG   G G G N  YGG
Subjt:  RNRGGNVRGR-----GGRGRSGGNFRGRGRGGYNGPQFDFQQDDGYNQDFPPQ-GRGRGRGQRGG-FRGRGRGFN-SYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGGTACCAAAGAGTTGAGAAGCCAAGGGGTGAGACGCCAATTGACGAGAATGAGATTCGGATTACGAGCCAGGGAAGGATGCGCAACTATATCACATATGCCAT
GACCCTACTTCAGGAAAAAGGTTCCAATGAAATTGTTTTCAAGGCGATGGGAAGGGCGATAAACAAGACTGTGACAATTGTGGAACTAATCAAGAGGCGAATTGTAGGTC
TTCATCAGAATACCTCAATTAGCTCTACCGATATCACTGATACATGGGAGCCATTGGAGGAAGGCCTTCTTCCATTAGAAACAACAAGGCATGTCTCGATGATCGCGATA
ACCCTCTCAAAGAGTGAATTAAATAAATCCTCCGTGGGGTATCAGCCTCCACTTCCTGCTGAGCTTGTGAAAGCATCCGTCGAGTATGGCTACGAGGGAGAAGGCTCACC
TCATGATCAGGGTCCAGGTCGAGGTAGAGGACGGGGCCGTAATGGCAGGGGAAGGTCCAGGGGTAGAGGACCTCCTGGTAATGGCTTTGTGGCTAATGAATATGATGATG
GAGAATGGGAACGTAATAGGGGTGGTAATGTAAGAGGTAGGGGCGGCCGAGGGAGGAGTGGTGGCAATTTCCGTGGCCGTGGAAGAGGAGGGTACAATGGACCTCAATTT
GATTTTCAGCAAGATGATGGGTACAACCAAGACTTCCCACCTCAAGGCCGTGGACGTGGCCGTGGACAAAGGGGTGGGTTTCGTGGAAGGGGCCGTGGTTTCAATTCGTA
TGGAGGACCGATCCAAGTCGCCGCATGA
mRNA sequenceShow/hide mRNA sequence
GTCGGTTAGGTTAGTTTTCGCAATAGTGCGGCTACTATATAAAGCCCGAAACAACACTGTTTGCAATTTAGGGCGTAACAGAAGAAACAAGCCGTAGAAGAGGGCTCTCG
TTTGTGGAGCGTATTTTATCCTATTTCCAATCGCTATGGATCGGTACCAAAGAGTTGAGAAGCCAAGGGGTGAGACGCCAATTGACGAGAATGAGATTCGGATTACGAGC
CAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAAGGTTCCAATGAAATTGTTTTCAAGGCGATGGGAAGGGCGATAAACAAGACTGTGAC
AATTGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTAGCTCTACCGATATCACTGATACATGGGAGCCATTGGAGGAAGGCCTTCTTCCAT
TAGAAACAACAAGGCATGTCTCGATGATCGCGATAACCCTCTCAAAGAGTGAATTAAATAAATCCTCCGTGGGGTATCAGCCTCCACTTCCTGCTGAGCTTGTGAAAGCA
TCCGTCGAGTATGGCTACGAGGGAGAAGGCTCACCTCATGATCAGGGTCCAGGTCGAGGTAGAGGACGGGGCCGTAATGGCAGGGGAAGGTCCAGGGGTAGAGGACCTCC
TGGTAATGGCTTTGTGGCTAATGAATATGATGATGGAGAATGGGAACGTAATAGGGGTGGTAATGTAAGAGGTAGGGGCGGCCGAGGGAGGAGTGGTGGCAATTTCCGTG
GCCGTGGAAGAGGAGGGTACAATGGACCTCAATTTGATTTTCAGCAAGATGATGGGTACAACCAAGACTTCCCACCTCAAGGCCGTGGACGTGGCCGTGGACAAAGGGGT
GGGTTTCGTGGAAGGGGCCGTGGTTTCAATTCGTATGGAGGACCGATCCAAGTCGCCGCATGATGGGCTGAAGGTTAAATCCTAAATTTATGCAATATGATGGATGACTC
CTAAAAAATGTATCATTAGGATTATTCTCTCTTTGGTTTTAGTTGCTAGTTGGTAGTTGCAAAGGGACAACTATAATATTAACAGTAGGAATTTGGCTTCTTTTTTCTTT
GGAGTCATAATTAGATGCCAGTGTTTGAAAGAGCTGCAAATGTGAGTGTGGCTACTCGTTTTCTTGTAGATTTAGGTGAGCTGCTTGACGTTTGTAATTTTATTTTTTTA
AAAAATTTCTTGACCGACAGCGTATTCTTTTATTTGAGTTTTTTAGGATCTTTTTGA
Protein sequenceShow/hide protein sequence
MDRYQRVEKPRGETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSISSTDITDTWEPLEEGLLPLETTRHVSMIAI
TLSKSELNKSSVGYQPPLPAELVKASVEYGYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGEWERNRGGNVRGRGGRGRSGGNFRGRGRGGYNGPQF
DFQQDDGYNQDFPPQGRGRGRGQRGGFRGRGRGFNSYGGPIQVAA