; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012458 (gene) of Chayote v1 genome

Gene IDSed0012458
OrganismSechium edule (Chayote v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome locationLG13:22985823..22988886
RNA-Seq ExpressionSed0012458
SyntenySed0012458
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141282.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]1.5e-3889.58Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQGMEFD+KDQNQSY  KDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
XP_008452624.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucumis melo]1.9e-3890.62Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQGMEFDSKDQNQSY  KDSKD +RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
XP_022159826.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 [Momordica charantia]2.7e-3787.5Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQG+EFD KDQNQSY +KDS D++R+S+E
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
XP_022937244.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata]5.5e-3887.5Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+A+GSKYRSSRMIFQGME D+KDQNQSY SKDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
XP_022977146.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]1.2e-3786.46Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+A+GSKYRSSRMIFQGME D+KDQNQ+Y SKDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
TrEMBL top hitse value%identityAlignment
A0A0A0L0F8 Uncharacterized protein7.0e-3989.58Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQGMEFD+KDQNQSY  KDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
A0A1S3BVF8 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X19.2e-3990.62Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQGMEFDSKDQNQSY  KDSKD +RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
A0A6J1E543 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X11.3e-3787.5Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+AFGSKYRSSRMIFQG+EFD KDQNQSY +KDS D++R+S+E
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
A0A6J1F9U6 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X12.7e-3887.5Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+A+GSKYRSSRMIFQGME D+KDQNQSY SKDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
A0A6J1IHM9 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X15.9e-3886.46Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
        MVL+NF+GAGVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFG+A+GSKYRSSRMIFQGME D+KDQNQ+Y SKDSKD++RNSR+
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRE
SwissProt top hitse value%identityAlignment
Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic2.2e-2972.53Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFG+AFGS YRSSR+ FQG+E ++ D+ +  V+  SK+ T
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein1.6e-3072.53Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFG+AFGS YRSSR+ FQG+E ++ D+ +  V+  SK+ T
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT
AT1G27695.2 glycine-rich protein1.6e-3072.53Show/hide
Query:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFG+AFGS YRSSR+ FQG+E ++ D+ +  V+  SK+ T
Subjt:  MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTCTCAAACTTCCATGGAGCTGGCGTCGGATTCGGTTTCGGCGTCGGTTGTGGGTTCGGTGTAGGATGGGGTTTTGGAGGAATGCCTTTAAACTTCTTGGGCCT
TGGTGCTGGTGGTGGGTGCGGTGTTGGATTGGGACTTGGATGGGGCTTTGGCTCGGCTTTCGGGAGTAAGTATCGGTCTTCGAGGATGATATTTCAGGGAATGGAATTTG
ATAGCAAGGATCAAAATCAAAGTTATGTTAGCAAGGACTCAAAAGATGTAACCAGAAATTCCAGAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
CTCGCCCCGGCTCATTAAAATGTTTTTGTTTTTCCATTTTGTTTATTGAGGATTAAATTTATAGAATTTCATCGACCTGGTCGAAGTAATCGTTGATTCAATTTCTCCAT
TTGTGGCTGCGCGAGAGAATGGTACTCTCAAACTTCCATGGAGCTGGCGTCGGATTCGGTTTCGGCGTCGGTTGTGGGTTCGGTGTAGGATGGGGTTTTGGAGGAATGCC
TTTAAACTTCTTGGGCCTTGGTGCTGGTGGTGGGTGCGGTGTTGGATTGGGACTTGGATGGGGCTTTGGCTCGGCTTTCGGGAGTAAGTATCGGTCTTCGAGGATGATAT
TTCAGGGAATGGAATTTGATAGCAAGGATCAAAATCAAAGTTATGTTAGCAAGGACTCAAAAGATGTAACCAGAAATTCCAGAGAAGATTGAGTTTGATCTCTTCTCTAC
TTATTCACTTGTGTAAGCCTTTTGCATTGTAAGAGTTCTTTAAATCCTTTTGAACTCTTTGTGGATGGAATTGAGATAACGTTTGATTGCATAATTGTATCGCCAGTTAC
ATCTGATCGTTTATATCTGATCGTATAAAGTTACTTTACTTAACC
Protein sequenceShow/hide protein sequence
MVLSNFHGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGSAFGSKYRSSRMIFQGMEFDSKDQNQSYVSKDSKDVTRNSRED