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Sed0012477 (gene) of Chayote v1 genome

Gene IDSed0012477
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:32305157..32305525
RNA-Seq ExpressionSed0012477
SyntenySed0012477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]2.0e-2456Show/hide
Query:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHI---NTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEK
        MGISK LSFVC++AI + KVA+ADS HFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I   N  +  D D+D  D  ++ VG      LS+S S + AE 
Subjt:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHI---NTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEK

Query:  QAADFDNDNVSP-EPIARKVVVLGH
        QA   +   +SP + ++  V+VLGH
Subjt:  QAADFDNDNVSP-EPIARKVVVLGH

KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]1.8e-2263Show/hide
Query:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQA
        MGISKGLSFVC++AI I KVA+AD+ HFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I++ +   + D+D  D  ++ VG      LS S S EAAE +A
Subjt:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQA

KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2455.08Show/hide
Query:  VCLVAI-----FIKVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQAADFDN
        +C +AI     FIK+A+AD  HFGIHA+GHAVEPFCPGGYSDRGDHC HIG I + + G D D+D  D  ++ +G K SM +S+SEST+ AEK+A   + 
Subjt:  VCLVAI-----FIKVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQAADFDN

Query:  DNVSP-EPIARKVVVLGH
        +++SP E ++ KV VLGH
Subjt:  DNVSP-EPIARKVVVLGH

KAG6589281.1 hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1349.21Show/hide
Query:  MGISKGLSFVCLVAI-----FIKVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAE
        M ISKGLSF+ LVAI     FI+VA+A S H G     HAVE  CPGG    G+HC H G +  +  VD D+DF D     V  K  M +S+SESTE AE
Subjt:  MGISKGLSFVCLVAI-----FIKVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAE

Query:  KQAADFDNDNVSP-EPIARKVVVLGH
        ++A + + +  SP EP  +KVVVLGH
Subjt:  KQAADFDNDNVSP-EPIARKVVVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein7.3e-2556.91Show/hide
Query:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQA
        MGISKGLSFVC++AI I KVA+AD+ HFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I++ +   + D+D  D  ++ VG      LS S S EAAE +A
Subjt:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKD-GVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQA

Query:  ADFDNDNVSP-EPIARKVVVLGH
           +    SP + ++ K +VLGH
Subjt:  ADFDNDNVSP-EPIARKVVVLGH

A0A5A7V7L4 Uncharacterized protein9.5e-2556Show/hide
Query:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHI---NTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEK
        MGISK LSFVC++AI + KVA+ADS HFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I   N  +  D D+D  D  ++ VG      LS+S S + AE 
Subjt:  MGISKGLSFVCLVAIFI-KVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHI---NTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEK

Query:  QAADFDNDNVSP-EPIARKVVVLGH
        QA   +   +SP + ++  V+VLGH
Subjt:  QAADFDNDNVSP-EPIARKVVVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGGAATTTCAAAAGGGCTATCATTTGTGTGCCTAGTCGCCATCTTCATCAAAGTCGCCAACGCGGATTCCTCCCACTTCGGCATCCACGCTGTCGGCCACGC
GGTCGAGCCGTTCTGCCCCGGTGGCTACTCGGACAGAGGGGACCACTGCCAGCACATCGGCCACATCAACACAAAAGATGGCGTGGATGGTGACGAGGATTTTGTGGACC
ACCCGTTTCAATACGTGGGCGACAAGGCTTCGATGCACTTGTCGCTGTCGGAATCCACCGAGGCTGCTGAAAAGCAGGCTGCGGATTTCGACAATGATAACGTTTCACCT
GAACCCATTGCCCGTAAAGTAGTTGTTTTGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGGAATTTCAAAAGGGCTATCATTTGTGTGCCTAGTCGCCATCTTCATCAAAGTCGCCAACGCGGATTCCTCCCACTTCGGCATCCACGCTGTCGGCCACGC
GGTCGAGCCGTTCTGCCCCGGTGGCTACTCGGACAGAGGGGACCACTGCCAGCACATCGGCCACATCAACACAAAAGATGGCGTGGATGGTGACGAGGATTTTGTGGACC
ACCCGTTTCAATACGTGGGCGACAAGGCTTCGATGCACTTGTCGCTGTCGGAATCCACCGAGGCTGCTGAAAAGCAGGCTGCGGATTTCGACAATGATAACGTTTCACCT
GAACCCATTGCCCGTAAAGTAGTTGTTTTGGGGCATTGA
Protein sequenceShow/hide protein sequence
MAMGISKGLSFVCLVAIFIKVANADSSHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHINTKDGVDGDEDFVDHPFQYVGDKASMHLSLSESTEAAEKQAADFDNDNVSP
EPIARKVVVLGH