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Sed0012480 (gene) of Chayote v1 genome

Gene IDSed0012480
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:21774928..21775635
RNA-Seq ExpressionSed0012480
SyntenySed0012480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053662.1 hypothetical protein E6C27_scaffold135G00340 [Cucumis melo var. makuwa]1.1e-2640.98Show/hide
Query:  KKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDL
        + +K++ SS++ S      + E++D  + SS     +KL EEIV +Y  YI+HV +M +DRF DE+ W FD   C  LA    +KVQR+  EL+ MKKD 
Subjt:  KKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDL

Query:  NYSK--VGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI
        N  K  V +I +QL  +HE F  S NI AS+M  C + +LI C NE+  ++ +L+GI  RI ++KT   K K +  + +NLRI
Subjt:  NYSK--VGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI

KAG6594502.1 hypothetical protein SDJN03_11055, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2536.4Show/hide
Query:  DKDKPRDLKMKGKVKEEQDEPKNSKIKKMAQELKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSS-------------VL
        D D+ +D + K K+ ++   P      +M + L+I  V    +F  P  +    +  +++  +   SKR+  R+ EV+  +  SS              +
Subjt:  DKDKPRDLKMKGKVKEEQDEPKNSKIKKMAQELKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSS-------------VL

Query:  DSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNYSK--------VGEIVDQLGNIHESFHRSPNI
           L L EEIV VY KYIDH++ M R+RF DE  W F    C GLA   ++ +Q +  EL  MK DL+  K        + +I++QL  +HESF RSPNI
Subjt:  DSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNYSK--------VGEIVDQLGNIHESFHRSPNI

Query:  NASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT
         ASA PNCTKQ+LI+C  EL   K QL+ I+S +  LKT
Subjt:  NASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT

KAG6594503.1 hypothetical protein SDJN03_11056, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0428.5Show/hide
Query:  EEQDEPKNSKIKKMAQE--LKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGR
        +E ++PK  ++++  +E  L I  V     F   +      KK  +   +   + R GK  I       P  + D  + L    +G +  YI H++EM  
Subjt:  EEQDEPKNSKIKKMAQE--LKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGR

Query:  DRFKDEKNWRFDSTLCEG--LANACVEKVQRVRDELEGM--KKDL--NYSKVGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLH
        +R +   NW   S L EG  L +  + KVQ + DE+  +  +KDL   Y K   I+ QL  I +    SPNI   +  +CT  +L  CE+EL+  KN   
Subjt:  DRFKDEKNWRFDSTLCEG--LANACVEKVQRVRDELEGM--KKDL--NYSKVGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLH

Query:  GITSRIRQLKTKKK
         + S + +L  + K
Subjt:  GITSRIRQLKTKKK

KGN59675.1 hypothetical protein Csa_002140 [Cucumis sativus]1.7e-2442.01Show/hide
Query:  IEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNY--------SKVGEIVDQL
        +E++D  + SS     +KL EEIV +Y  YI+HV +M +DRF DE+ W FD T C  LA   V+K++R+  EL  MKKD N          +V +I +QL
Subjt:  IEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNY--------SKVGEIVDQL

Query:  GNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI
          +H+ F  S NI ASA   CT+ +LI C NE+  +  +L+GIT RI +LK    K K +  + +NLRI
Subjt:  GNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI

XP_023518166.1 uncharacterized protein LOC111781710 [Cucurbita pepo subsp. pepo]1.9e-2336.28Show/hide
Query:  DKDKPRDLKMKGKVKEEQDEPKNSKIKKMAQELKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSS-------------VL
        + D+ +D + K K+ ++   P      +M + L+I  V    +F  P  +    +  +++  +   SKR+  R+ EV+  +  SS              +
Subjt:  DKDKPRDLKMKGKVKEEQDEPKNSKIKKMAQELKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSS-------------VL

Query:  DSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNYSK--------VGEIVDQLGNIHESFHRSPNI
           LKL EEIV VY KYIDH++ M R+RFKDE  W F    C GLA   ++ +Q +  EL  MK DL+  K        + +I++QL  +HESF RSPNI
Subjt:  DSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNYSK--------VGEIVDQLGNIHESFHRSPNI

Query:  NASAMPNCTKQQLISCENELQHIKNQ
        +ASA PNCTKQ+LI+C  EL   K Q
Subjt:  NASAMPNCTKQQLISCENELQHIKNQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCD3 Uncharacterized protein8.2e-2542.01Show/hide
Query:  IEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNY--------SKVGEIVDQL
        +E++D  + SS     +KL EEIV +Y  YI+HV +M +DRF DE+ W FD T C  LA   V+K++R+  EL  MKKD N          +V +I +QL
Subjt:  IEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNY--------SKVGEIVDQL

Query:  GNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI
          +H+ F  S NI ASA   CT+ +LI C NE+  +  +L+GIT RI +LK    K K +  + +NLRI
Subjt:  GNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI

A0A5A7UD05 Uncharacterized protein5.1e-2740.98Show/hide
Query:  KKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDL
        + +K++ SS++ S      + E++D  + SS     +KL EEIV +Y  YI+HV +M +DRF DE+ W FD   C  LA    +KVQR+  EL+ MKKD 
Subjt:  KKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVIEMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDL

Query:  NYSK--VGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI
        N  K  V +I +QL  +HE F  S NI AS+M  C + +LI C NE+  ++ +L+GI  RI ++KT   K K +  + +NLRI
Subjt:  NYSK--VGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKT---KKKPVATKHKNLRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGATAAACCAAGAGATTTGAAGATGAAAGGCAAAGTGAAAGAAGAACAAGATGAGCCAAAGAACTCGAAGATTAAAAAAATGGCACAAGAACTCAAGATACC
AACAGTTCCACCAGGCTTTCTATTCCAACCACCCAGATCAGTAAGCCCTTTGCCAAAGAAAACTAAACAACAATCATCATCGGTATCGATATCGAAAAGAAGCGGAAAAA
GAGCTATTGAAGTGGTTGATCATCAGACGCCTTCAAGCGTCCTGGATTCGACACTGAAACTAGCCGAGGAAATCGTCGGGGTGTACGGTAAGTACATCGATCACGTAATT
GAAATGGGGAGAGATAGATTCAAAGATGAAAAGAATTGGCGGTTTGATTCAACTCTGTGCGAAGGCCTGGCTAATGCTTGTGTAGAGAAAGTCCAGAGGGTGAGAGATGA
ATTAGAAGGAATGAAGAAAGATTTGAATTATTCCAAAGTTGGTGAAATTGTGGATCAACTGGGAAACATTCATGAGTCTTTTCATCGCTCTCCCAATATCAACGCTTCTG
CAATGCCAAACTGCACAAAGCAACAGCTGATATCATGTGAGAATGAGCTTCAGCATATCAAGAATCAGCTTCATGGCATAACTTCTCGGATTCGCCAACTCAAAACCAAG
AAGAAACCCGTCGCCACAAAACACAAGAATTTGAGAATTGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGATAAACCAAGAGATTTGAAGATGAAAGGCAAAGTGAAAGAAGAACAAGATGAGCCAAAGAACTCGAAGATTAAAAAAATGGCACAAGAACTCAAGATACC
AACAGTTCCACCAGGCTTTCTATTCCAACCACCCAGATCAGTAAGCCCTTTGCCAAAGAAAACTAAACAACAATCATCATCGGTATCGATATCGAAAAGAAGCGGAAAAA
GAGCTATTGAAGTGGTTGATCATCAGACGCCTTCAAGCGTCCTGGATTCGACACTGAAACTAGCCGAGGAAATCGTCGGGGTGTACGGTAAGTACATCGATCACGTAATT
GAAATGGGGAGAGATAGATTCAAAGATGAAAAGAATTGGCGGTTTGATTCAACTCTGTGCGAAGGCCTGGCTAATGCTTGTGTAGAGAAAGTCCAGAGGGTGAGAGATGA
ATTAGAAGGAATGAAGAAAGATTTGAATTATTCCAAAGTTGGTGAAATTGTGGATCAACTGGGAAACATTCATGAGTCTTTTCATCGCTCTCCCAATATCAACGCTTCTG
CAATGCCAAACTGCACAAAGCAACAGCTGATATCATGTGAGAATGAGCTTCAGCATATCAAGAATCAGCTTCATGGCATAACTTCTCGGATTCGCCAACTCAAAACCAAG
AAGAAACCCGTCGCCACAAAACACAAGAATTTGAGAATTGGAAATTAA
Protein sequenceShow/hide protein sequence
MDKDKPRDLKMKGKVKEEQDEPKNSKIKKMAQELKIPTVPPGFLFQPPRSVSPLPKKTKQQSSSVSISKRSGKRAIEVVDHQTPSSVLDSTLKLAEEIVGVYGKYIDHVI
EMGRDRFKDEKNWRFDSTLCEGLANACVEKVQRVRDELEGMKKDLNYSKVGEIVDQLGNIHESFHRSPNINASAMPNCTKQQLISCENELQHIKNQLHGITSRIRQLKTK
KKPVATKHKNLRIGN