; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012484 (gene) of Chayote v1 genome

Gene IDSed0012484
OrganismSechium edule (Chayote v1)
DescriptionELF4-like protein
Genome locationLG03:12049507..12050645
RNA-Seq ExpressionSed0012484
SyntenySed0012484
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599530.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3687.63Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP
        ++DGKM QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELN+NIRRVVDLYA LS SFTKSMEASSEG+S AA PGHKR+RPPP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP

XP_006381644.1 protein ELF4-LIKE 3 [Populus trichocarpa]1.5e-3583Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP
        +IDGK++QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL+RNVGLIRELN+NIRRVVDLYADLSTSFTKSM+ASSEGDS+ A+      GHKR+RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP

XP_021606568.1 protein ELF4-LIKE 3-like [Manihot esculenta]2.0e-3583Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM-----PGHKRHRP
        +IDGK++QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL+RNVGLIRELN+NIRRVVDLYADLS+SFTKSMEASSEGDS+ A+      GHKR+RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM-----PGHKRHRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]1.4e-3687.63Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP
        ++DGKM QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELN+NIRRVVDLYA LS SFTKSMEASSEG+S AA PGHKR+RPPP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]5.3e-3686.6Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP
        ++DGKM  TFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELN+NIRRVVDLYA LS SFTKSMEASSEG+S AA PGHKR+RPPP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP

TrEMBL top hitse value%identityAlignment
A0A4U5QTY9 Elf4 domain-containing protein7.5e-3683Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP
        +IDGK++QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL+RNVGLIRELN+NIRRVVDLYADLSTSFTKSM+ASSEGDS+ A+      GHKR+RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP

A0A6J1G4K6 protein ELF4-LIKE 3-like6.8e-3787.63Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP
        ++DGKM QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELN+NIRRVVDLYA LS SFTKSMEASSEG+S AA PGHKR+RPPP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP

A0A6J1KJ14 protein ELF4-LIKE 3-like6.8e-3787.63Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP
        ++DGKM QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELN+NIRRVVDLYA LS SFTKSMEASSEG+S AA PGHKR+RPPP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP

A0A6M2ESE4 Elf4 domain-containing protein7.5e-3683Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP
        +IDGK++QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL+RNVGLIRELN+NIRRVVDLYADLSTSFTKSM+ASSEGDS+ A+      GHKR+RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP

B9MSX7 Elf4 domain-containing protein7.5e-3683Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP
        +IDGK++QTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNL+RNVGLIRELN+NIRRVVDLYADLSTSFTKSM+ASSEGDS+ A+      GHKR+RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMP-----GHKRHRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 42.4e-1543.96Show/hide
Query:  EGEIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPG
        +GE D  M +   +NF QVQ++LD+NR LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+TSF+        G       G
Subjt:  EGEIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPG

O80877 Protein ELF4-LIKE 15.0e-1341.76Show/hide
Query:  DGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSME----ASSEGDSAAAMPG
        D ++  T    F + Q  LDQNR LI  +N+NH S++PDN++RNVGLI E+N NI +V+++Y+DLS +F K  +     + +GD+     G
Subjt:  DGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSME----ASSEGDSAAAMPG

Q570U6 Protein ELF4-LIKE 45.5e-2872.09Show/hide
Query:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM
        +DGK++Q+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELN+NIRRV  LY DLS SF +S++ASSEG+S+  +
Subjt:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM

Q8S8F5 Protein ELF4-LIKE 31.8e-3173.68Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRP
        ++DGK++QTF+K+FVQVQNILD NRLLINEINQNHESK+PDNL RNVGLIRELN+N+RRV  LY DLS +F+KSMEASSEGDS+    G++R RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRP

Q94BS8 Protein ELF4-LIKE 21.0e-2670.11Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM
        ++DGK++Q FQK+FVQVQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELN+NIR V  LY DLS SF +S++ASSEG+S   +
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 43.9e-2972.09Show/hide
Query:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM
        +DGK++Q+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELN+NIRRV  LY DLS SF +S++ASSEG+S+  +
Subjt:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM

AT1G17455.2 ELF4-like 43.9e-2972.09Show/hide
Query:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM
        +DGK++Q+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELN+NIRRV  LY DLS SF +S++ASSEG+S+  +
Subjt:  IDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM

AT1G72630.1 ELF4-like 27.4e-2870.11Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM
        ++DGK++Q FQK+FVQVQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELN+NIR V  LY DLS SF +S++ASSEG+S   +
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAM

AT2G06255.1 ELF4-like 31.3e-3273.68Show/hide
Query:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRP
        ++DGK++QTF+K+FVQVQNILD NRLLINEINQNHESK+PDNL RNVGLIRELN+N+RRV  LY DLS +F+KSMEASSEGDS+    G++R RP
Subjt:  EIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRP

AT2G40080.1 Protein of unknown function (DUF1313)1.7e-1643.96Show/hide
Query:  EGEIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPG
        +GE D  M +   +NF QVQ++LD+NR LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+TSF+        G       G
Subjt:  EGEIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGGAGATTGATGGGAAAATGGTGCAGACATTTCAGAAGAATTTTGTTCAAGTTCAGAACATTTTGGACCAAAATAGATTGTTGATTAATGAAATTAATCAAAA
TCATGAGTCGAAATTGCCTGATAATCTCACCAGAAATGTGGGGCTGATTCGTGAGCTGAATAGCAACATTAGAAGGGTTGTGGATTTGTACGCTGATCTTTCTACTTCGT
TCACTAAATCTATGGAGGCTTCGTCGGAAGGTGACTCCGCCGCCGCCATGCCCGGCCACAAGCGCCACCGTCCTCCGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTTTTGTTCTCTATCTCTTTCTTTTTCTCTCTAGATTTCTCAGAAATTACAGAACAGGTTTCTGTTCCGGAGATTCGATTCAATCGCCGATCTTTTGCATCAGCTCC
TCGGGAATCACTATCTTTCTTCTACAATATAATGTTCCAGATTTTCAAGATTCTTCCTTCAAACTCTGGGCTCTAGAAATGAAATGAAATTGTGGGAATTGTGAGCAATC
AAGGCAGACCCATTTTGAAAAAAATTGAATTTGTGGAAAAATGGAAGGGGAGATTGATGGGAAAATGGTGCAGACATTTCAGAAGAATTTTGTTCAAGTTCAGAACATTT
TGGACCAAAATAGATTGTTGATTAATGAAATTAATCAAAATCATGAGTCGAAATTGCCTGATAATCTCACCAGAAATGTGGGGCTGATTCGTGAGCTGAATAGCAACATT
AGAAGGGTTGTGGATTTGTACGCTGATCTTTCTACTTCGTTCACTAAATCTATGGAGGCTTCGTCGGAAGGTGACTCCGCCGCCGCCATGCCCGGCCACAAGCGCCACCG
TCCTCCGCCGTAGCCCCCCCCCCCCCCTTTTTTTCATAATAATTTTCCCAGATTCTCTGTTTTAGTGGCTGCCAAAATTAAGCATGTTTTTTCAATTTTCATTTGGGTGG
TGGTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTT
Protein sequenceShow/hide protein sequence
MEGEIDGKMVQTFQKNFVQVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNSNIRRVVDLYADLSTSFTKSMEASSEGDSAAAMPGHKRHRPPP