; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012491 (gene) of Chayote v1 genome

Gene IDSed0012491
OrganismSechium edule (Chayote v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationLG01:8984407..8985097
RNA-Seq ExpressionSed0012491
SyntenySed0012491
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949253.1 uncharacterized protein LOC111452664 [Cucurbita moschata]3.3e-5576.19Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+L HCLGCVLPCGALDLIRVVHLNGHV+ FSPPL AGEILN NPGHVLTTPSSD H L+RR T+LSP+S LRRG IYFLIPA+SD+RKPPK  S   
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S N    PD   DVIVLKKPKSG R+RR  RSCGGAWQPHL SI ED
Subjt:  SGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

XP_022964962.1 uncharacterized protein LOC111464913 [Cucurbita moschata]1.9e-5571.71Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+LRHCLGCVLPCGALDLIRVVHLNGHV+EFSPP+AA EIL+ NPGHVLTTPS DHH LVR VT+LSPES LRRGGIYFLIPA+SD+RK  K PS+ T
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S + +         R +DVIV KK K GRRDRRS R+  GAW+PHL SI ED
Subjt:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

XP_022970467.1 uncharacterized protein LOC111469438 [Cucurbita maxima]5.1e-5672.37Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+LRHCLGCVLPCGALDLIRVVHLNGHV+EFSPP+AA EIL+ NPGHVLTTPS DHH LVR VT+LSPES LRRGGIYFLIPA+SD+RK  KKPS+ T
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S + +         R +DVIV KK K GRRDRRS R+  GAW+PHL SI ED
Subjt:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

XP_023519366.1 uncharacterized protein LOC111782801 [Cucurbita pepo subsp. pepo]1.5e-5573.15Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+LRHCLGCVLPCGALDLIRVVHLNGHV+EFSPP+AA EIL+ NPGHVLTTPS DHH LVR VT+LSPES LRRGGIYFLIPA+SD+RK  KKPS+ T
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEIL-----RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S + +      R +DVIV K  K GRRDRRS R+  GAW+PHL SI ED
Subjt:  SGNEIL-----RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

XP_038895775.1 uncharacterized protein LOC120083938 [Benincasa hispida]9.0e-5372.97Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTT-
        MGN+LR+CLGC+LPCGALDLIRVVHLNGHV+EFSPPL+A EIL+ NPGHVLTTPSSD HRLVRRVT+LSPES LRRGGIYFLIPA+SD+RK  KKPS   
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTT-

Query:  ---TSGNEILRPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
            S +     +DVIVLKK K  RRDRR  RS GG W+PHL SI ED
Subjt:  ---TSGNEILRPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

TrEMBL top hitse value%identityAlignment
A0A0A0LYB2 Uncharacterized protein1.0e-4971.14Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPA-NSD--NRKPP-KKP
        MGN+L+HCLGC+LPCGALDLIRVVHLNG V+EFSPPL A +IL  NPGH+LTTPSS  HRLVRRV +LSP+S LRRGGIYFLIPA +SD  +RKPP KK 
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPA-NSD--NRKPP-KKP

Query:  STTTSGNEIL-RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S+  SG  +    +DVIVLKK K  RRDRR  RS GGAWQPHL SI ED
Subjt:  STTTSGNEIL-RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

A0A5A7T586 Uncharacterized protein6.3e-5271.43Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPA-NSDNR-KPPKKPST
        MGN+L+HCLGC+LPCGALDLIRVVHLNG V+EFSPPLAA EIL  NPGHVLTTPSSD HRLVRRV +LSPES LRRGGIYFLIPA +SD+R KP KK S+
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPA-NSDNR-KPPKKPST

Query:  TTSGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
          S   +         R +DVIVLKK K  RRDRR  RS GGAWQPHL SI ED
Subjt:  TTSGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

A0A6J1GBI2 uncharacterized protein LOC1114526641.6e-5576.19Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+L HCLGCVLPCGALDLIRVVHLNGHV+ FSPPL AGEILN NPGHVLTTPSSD H L+RR T+LSP+S LRRG IYFLIPA+SD+RKPPK  S   
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S N    PD   DVIVLKKPKSG R+RR  RSCGGAWQPHL SI ED
Subjt:  SGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

A0A6J1HJ26 uncharacterized protein LOC1114649139.4e-5671.71Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+LRHCLGCVLPCGALDLIRVVHLNGHV+EFSPP+AA EIL+ NPGHVLTTPS DHH LVR VT+LSPES LRRGGIYFLIPA+SD+RK  K PS+ T
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S + +         R +DVIV KK K GRRDRRS R+  GAW+PHL SI ED
Subjt:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

A0A6J1HZ69 uncharacterized protein LOC1114694382.5e-5672.37Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT
        MGN+LRHCLGCVLPCGALDLIRVVHLNGHV+EFSPP+AA EIL+ NPGHVLTTPS DHH LVR VT+LSPES LRRGGIYFLIPA+SD+RK  KKPS+ T
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTT

Query:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED
        S + +         R +DVIV KK K GRRDRRS R+  GAW+PHL SI ED
Subjt:  SGNEIL--------RPDDVIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein7.9e-3144.97Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS------------D
        MGN+LR CL CVLPCGALDLIR+VHLNG+VEE +  + AGEIL  NP HVL+ P S    +VR++ +LSPES+L+RG IYFLIP +S             
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS------------D

Query:  NRKPPKKPSTTTSGNEILRPDDVIVL------------KKPKSGRRDRRSGRSCG-GAWQPHLPSIGED
         +K  + PS   +G EI   ++ + L               K  R  RR  RS     W+P L SI ED
Subjt:  NRKPPKKPSTTTSGNEILRPDDVIVL------------KKPKSGRRDRRSGRSCG-GAWQPHLPSIGED

AT1G29195.1 unknown protein3.9e-2238.73Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVL---TTPSSDHHR----LVRRVTVLSPESQLRRGGIYFLIPANSDNRKPP
        M  T+R C+ C+LPCGALD+IR+VH NGHVEE S  + A EI+  +P HVL   ++P+SDH         ++ ++ PE++L+RG IYFL+PA        
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVL---TTPSSDHHR----LVRRVTVLSPESQLRRGGIYFLIPANSDNRKPP

Query:  KKPSTTTSGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGG
         K      G +I R     + +V K+ +  R+ R     C G
Subjt:  KKPSTTTSGNEILRPD---DVIVLKKPKSGRRDRRSGRSCGG

AT2G30230.1 unknown protein2.1e-3144.63Show/hide
Query:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS--DNRKPPK----
        MGN+LR CL CVLPCGALDLIR+VHLNGHV+E + P+ AGEIL  NP HVL+ P S    +VR++ +LSPES+L+RG IYFLIP  S  + +K  K    
Subjt:  MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS--DNRKPPK----

Query:  --KPSTTTSGNEILRP--------------------DDVIVLKK----PKSGRRDRRSGRSCG-GAWQPHLPSIGED
          +     SGN+I                       +DV++ +K     K  R  R+  RS     W+PHL SI ED
Subjt:  --KPSTTTSGNEILRP--------------------DDVIVLKK----PKSGRRDRRSGRSCG-GAWQPHLPSIGED

AT3G61920.1 unknown protein1.7e-0441.18Show/hide
Query:  LIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS
        LI+VV  NG V E  PP+ A  I NE PGHV+    S  H        L    +L  G IY+L+P +S
Subjt:  LIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATACTTTAAGGCATTGTTTGGGCTGTGTTCTTCCTTGCGGAGCGTTGGATTTAATCCGAGTCGTTCATCTCAACGGCCACGTGGAAGAATTCTCTCCGCCGCT
CGCCGCCGGCGAGATCCTCAACGAAAATCCCGGCCACGTCCTCACCACTCCCTCCTCCGACCACCACCGCCTCGTCCGCCGTGTTACCGTTCTCTCTCCGGAATCTCAGC
TCCGACGCGGCGGCATTTATTTCTTGATTCCGGCCAATTCCGACAACCGGAAGCCTCCCAAAAAGCCCTCCACCACCACCTCCGGCAATGAAATTTTGCGGCCGGACGAT
GTCATTGTTTTGAAGAAGCCCAAATCCGGCCGCCGGGATCGCCGGAGCGGACGCTCCTGCGGCGGCGCGTGGCAGCCTCATTTACCTAGTATTGGTGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
TTCAGAGCTCCATTCGAAAAACGGTGTCGTTTTGGTAAAATGGGTAATACTTTAAGGCATTGTTTGGGCTGTGTTCTTCCTTGCGGAGCGTTGGATTTAATCCGAGTCGT
TCATCTCAACGGCCACGTGGAAGAATTCTCTCCGCCGCTCGCCGCCGGCGAGATCCTCAACGAAAATCCCGGCCACGTCCTCACCACTCCCTCCTCCGACCACCACCGCC
TCGTCCGCCGTGTTACCGTTCTCTCTCCGGAATCTCAGCTCCGACGCGGCGGCATTTATTTCTTGATTCCGGCCAATTCCGACAACCGGAAGCCTCCCAAAAAGCCCTCC
ACCACCACCTCCGGCAATGAAATTTTGCGGCCGGACGATGTCATTGTTTTGAAGAAGCCCAAATCCGGCCGCCGGGATCGCCGGAGCGGACGCTCCTGCGGCGGCGCGTG
GCAGCCTCATTTACCTAGTATTGGTGAAGATTAGTGATGAATTACCCAAAACACCCTCCTCTTATCAATATTGAAAATTTATATAAAATATATATATATGTGGCGGCGGC
CGATGAACAGAAATTGTTACTGTGTCTGATGATCGTGTACAGAAATTAATGGTTGGTGTTTGTGGTTAGAAGAAAAATCATTGATATTCAATTGTAATTGTAGCTTGATT
TAAATAAATCTGCGTATTTTTTTTTTGCGGA
Protein sequenceShow/hide protein sequence
MGNTLRHCLGCVLPCGALDLIRVVHLNGHVEEFSPPLAAGEILNENPGHVLTTPSSDHHRLVRRVTVLSPESQLRRGGIYFLIPANSDNRKPPKKPSTTTSGNEILRPDD
VIVLKKPKSGRRDRRSGRSCGGAWQPHLPSIGED