; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012501 (gene) of Chayote v1 genome

Gene IDSed0012501
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:32163383..32164064
RNA-Seq ExpressionSed0012501
SyntenySed0012501
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8056731.1 hypothetical protein FH972_013476 [Carpinus fangiana]2.8e-0844.44Show/hide
Query:  MGMEILEE---LIPPNTPSRTNLSLQIPKLQKRDNFHD---EEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSS-VFIELQF
        MG+EILEE   + P  T S T  S    +L + +   +   ++ +C TP ++   L  P+ CPP PKKPRP RRKL+  P  +F+ P DL+S VF+ L  
Subjt:  MGMEILEE---LIPPNTPSRTNLSLQIPKLQKRDNFHD---EEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSS-VFIELQF

Query:  PSKKIRAS
        PSKKIRAS
Subjt:  PSKKIRAS

KAG2691968.1 hypothetical protein I3760_08G031500 [Carya illinoinensis]2.2e-0849.11Show/hide
Query:  MGMEILEELIPPNTPSRT---------NLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPP--LFEPPQDLSSVFI
        MG E LEE I P TP RT          + L  P  +K    +DEE  C TP  +   L  P+ CPP PKKPR  +RKL  RPPP    E PQDL+SVF+
Subjt:  MGMEILEELIPPNTPSRT---------NLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPP--LFEPPQDLSSVFI

Query:  ELQFPSKKIRAS
         L  PSKKIRAS
Subjt:  ELQFPSKKIRAS

KAG6587720.1 hypothetical protein SDJN03_16285, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2261.62Show/hide
Query:  MGMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR
        MGME+++E   P TP R   SLQIPK ++RD    + E+C+TPTAA +RL P ++CPP PKKPRPPRRKLNF+PP  F+ PQDL SV+ ELQFPSKKI+
Subjt:  MGMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR

KAG6589677.1 hypothetical protein SDJN03_15100, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2469.7Show/hide
Query:  MGMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR
        MGME+LEE   P TP R +LSLQ+PK +K D    E+E C+TPTAAATRL P + CPP PKKPRPPRRKLNF PPP FE PQDLSSV+IELQ PSKKI+
Subjt:  MGMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR

KGN65496.1 hypothetical protein Csa_019987 [Cucumis sativus]6.1e-1959Show/hide
Query:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-KRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR
        MGMEIL+E   P TP  ++L   IPK + ++    D+EE+C TPTAAA RL P + CPP PKKPRPPRRKLNF PPP FE PQDL+SV+ +   PSKKI+
Subjt:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-KRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR

TrEMBL top hitse value%identityAlignment
A0A059CL15 Uncharacterized protein6.8e-0843.97Show/hide
Query:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-----KRDNFH---DEEEQCRTPTAAATRLPPPVD------CPPPPKKPRPPRRKLNFRPPP-LFEPPQDLS
        MGM + EE   P+TP RT +     KL      +R   H   D+E++CRTP +     P P+       CPP PKKPRPPRRK +  PP   F+ P DL+
Subjt:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-----KRDNFH---DEEEQCRTPTAAATRLPPPVD------CPPPPKKPRPPRRKLNFRPPP-LFEPPQDLS

Query:  SVFIELQFPSKKIRAS
        SVF+ +  PSKKIR+S
Subjt:  SVFIELQFPSKKIRAS

A0A0A0M005 Uncharacterized protein2.9e-1959Show/hide
Query:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-KRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR
        MGMEIL+E   P TP  ++L   IPK + ++    D+EE+C TPTAAA RL P + CPP PKKPRPPRRKLNF PPP FE PQDL+SV+ +   PSKKI+
Subjt:  MGMEILEELIPPNTPSRTNLSLQIPKLQ-KRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIR

A0A151SX09 Uncharacterized protein1.1e-0541.41Show/hide
Query:  MGMEILEELIPPNTPSRTNL--------SLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPP--LFEPPQDLSSVFI
        MG+EILEE   P TP RT +         L   K    ++  +E E+C TPT+ +  L  P+ CPPPPKKPR  R++  F+PP       P DL+SVF+
Subjt:  MGMEILEELIPPNTPSRTNL--------SLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPP--LFEPPQDLSSVFI

A0A2P5EMJ3 Uncharacterized protein8.3e-0641.38Show/hide
Query:  MGMEILEELIP---------PNTPSRTNLSL--QIPKLQKRD-NFHDEEEQCRTPTAAATRL-PPPVDCPPPPKKPR--PPRRKLNFRPPPLFEPPQDLS
        MG EILEE  P           T +R+N+ L   + K ++ D +  D+ ++CRTP +A   L   P+ CPP P+K R  P  RKL+      FE P+DL+
Subjt:  MGMEILEELIP---------PNTPSRTNLSL--QIPKLQKRD-NFHDEEEQCRTPTAAATRL-PPPVDCPPPPKKPR--PPRRKLNFRPPPLFEPPQDLS

Query:  SVFIELQFPSKKIRAS
        SVF+ L  PSKKIR S
Subjt:  SVFIELQFPSKKIRAS

A0A5N6R7V3 Uncharacterized protein1.4e-0844.44Show/hide
Query:  MGMEILEE---LIPPNTPSRTNLSLQIPKLQKRDNFHD---EEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSS-VFIELQF
        MG+EILEE   + P  T S T  S    +L + +   +   ++ +C TP ++   L  P+ CPP PKKPRP RRKL+  P  +F+ P DL+S VF+ L  
Subjt:  MGMEILEE---LIPPNTPSRTNLSLQIPKLQKRDNFHD---EEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSS-VFIELQF

Query:  PSKKIRAS
        PSKKIRAS
Subjt:  PSKKIRAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40460.1 unknown protein1.6e-0435.23Show/hide
Query:  GMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFI
        G+ I   L P  T  R     +I    + D +++EEE   TPTA  T++P  ++CPP P+K RP  +  +      F PP DL +VF+
Subjt:  GMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATGGAGATTTTGGAAGAATTAATTCCCCCAAATACCCCTTCAAGAACCAACCTTTCCCTTCAAATCCCCAAATTACAAAAAAGAGATAATTTTCATGATGAAGA
AGAACAATGCCGGACTCCCACGGCGGCCGCCACCCGCCTGCCGCCGCCGGTCGACTGTCCGCCGCCGCCAAAGAAACCTCGTCCTCCTCGAAGGAAATTGAATTTCCGGC
CGCCGCCGCTTTTCGAACCGCCTCAAGATCTCAGCTCTGTGTTCATTGAGCTTCAATTTCCCTCCAAGAAGATCAGAGCTTCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTAGTTTTAGATTGAAACCCCACCTCTTTTCTTCAACAAAATAAAAACACATTCTCTCTCTCTCTCTCTCTCTCATATATCTATACCACTTTCACCATTTTCAATTGCC
TTTTTTCTCTCTCTCACACACACAATTTTGAGTTTGTGCAAAATGGGGATGGAGATTTTGGAAGAATTAATTCCCCCAAATACCCCTTCAAGAACCAACCTTTCCCTTCA
AATCCCCAAATTACAAAAAAGAGATAATTTTCATGATGAAGAAGAACAATGCCGGACTCCCACGGCGGCCGCCACCCGCCTGCCGCCGCCGGTCGACTGTCCGCCGCCGC
CAAAGAAACCTCGTCCTCCTCGAAGGAAATTGAATTTCCGGCCGCCGCCGCTTTTCGAACCGCCTCAAGATCTCAGCTCTGTGTTCATTGAGCTTCAATTTCCCTCCAAG
AAGATCAGAGCTTCTAATAATTGATGTTTTTTTTTTCTTTTTCTAATTTGTTTAAAAATCTTTATATATATATATATATATATATTTTGAATTATTGGTTAACATGGGTT
TGTGTATAACTGAACAAATTCAGAAACATCCATTTGTAATTCTAATATCTCTCTCTATCTGTGTAATTCAGGTTTGTACACTATATCACTTCAAATTCTTCCTTTTTTAT
GTCAAGATATAAACTTTCATTT
Protein sequenceShow/hide protein sequence
MGMEILEELIPPNTPSRTNLSLQIPKLQKRDNFHDEEEQCRTPTAAATRLPPPVDCPPPPKKPRPPRRKLNFRPPPLFEPPQDLSSVFIELQFPSKKIRASNN