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Sed0012506 (gene) of Chayote v1 genome

Gene IDSed0012506
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:38464328..38466549
RNA-Seq ExpressionSed0012506
SyntenySed0012506
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3366.1Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MAAAA+I+PA M +MILLL+PT    +TSF P+NN DTS  GKYL+G+QDI SEFLMESH+SRIL  +Q F+TS T++A + S G C RPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

XP_011651393.1 uncharacterized protein LOC105434882 [Cucumis sativus]4.7e-3159.83Show/hide
Query:  AAALILPATMVVMILLLSPTAC-YTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEKR
        A AL++PA M +M+++L PTAC   +TSF P+NN  + G  KY+V E+DI+S F+MESH+SR+L ++Q FETS+T+NATQ S G+C+RPPRYDSCLG KR
Subjt:  AAALILPATMVVMILLLSPTAC-YTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEKR

Query:  STPPPEHCGTFNRKNPC
        +TPPP++C TFNR++PC
Subjt:  STPPPEHCGTFNRKNPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]1.7e-3365.25Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MAAAA+I+PA M +MILLL+PT    +TSF P+NN DTS  GKYL+G+QD+ SEFLMESH+SRIL  +Q F+TS T++A + S G C RPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]7.7e-3465.25Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MAAAA+++PA M +MILLL+PT+   +T+F P+NN DTS  GKYL+G+QDI SEFLMESH+SRIL  +Q F+TS T++A + S G CERPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]1.2e-3163.56Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MA AA ++PA M +MILLL+P     +TSF P+NN DTS  GKYL+G+QDI SEFLMESH+SRIL  +Q F+TS T++A + S G C RPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein2.3e-3159.83Show/hide
Query:  AAALILPATMVVMILLLSPTAC-YTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEKR
        A AL++PA M +M+++L PTAC   +TSF P+NN  + G  KY+V E+DI+S F+MESH+SR+L ++Q FETS+T+NATQ S G+C+RPPRYDSCLG KR
Subjt:  AAALILPATMVVMILLLSPTAC-YTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEKR

Query:  STPPPEHCGTFNRKNPC
        +TPPP++C TFNR++PC
Subjt:  STPPPEHCGTFNRKNPC

A0A0A0LCJ4 Uncharacterized protein1.8e-2552.1Show/hide
Query:  MAAAALILPATMVVMILLLS-PTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGE
        M A+AL++PA +V MILLL  P++C  +T+F P+ +  +S  GK ++GE+D++ EFLMESH+SRIL  ++ ++T++T+NA + S G C+RPPRYDSCLG+
Subjt:  MAAAALILPATMVVMILLLS-PTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGE

Query:  KRSTPPPEHCGTFNRKNPC
        KR+ PPP +C  +NR NPC
Subjt:  KRSTPPPEHCGTFNRKNPC

A0A6J1CP71 uncharacterized protein LOC1110132787.5e-2757.63Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MA AA+++P  M + ILL +P  C  +T+   + N +T G  K L+G++DI SEFLME H+SRIL E+  F+T  T NA   SV DCERPPRYDSCLGEK
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
        R+TPP E+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

A0A6J1G927 uncharacterized protein LOC1114520448.3e-3465.25Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MAAAA+I+PA M +MILLL+PT    +TSF P+NN DTS  GKYL+G+QD+ SEFLMESH+SRIL  +Q F+TS T++A + S G C RPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

A0A6J1KBP5 uncharacterized protein LOC1114928543.7e-3465.25Show/hide
Query:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK
        MAAAA+++PA M +MILLL+PT+   +T+F P+NN DTS  GKYL+G+QDI SEFLMESH+SRIL  +Q F+TS T++A + S G CERPPRYDSCLG+K
Subjt:  MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEK

Query:  RSTPPPEHCGTFNRKNPC
         + PPPE+CGTFNR NPC
Subjt:  RSTPPPEHCGTFNRKNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGCTCATCCTACCGGCCACCATGGTGGTCATGATTCTGCTCCTTAGCCCAACTGCATGTTACACTGTTACATCTTTCCTACCAGTCAACAACTTCGA
CACTTCTGGTACAGGGAAATACCTCGTGGGTGAACAAGATATTCAGTCTGAGTTTTTGATGGAGTCGCACATGAGCCGAATCTTGGAAGAAACTCAAACCTTCGAAACCA
GCGCAACGAGTAATGCGACCCAACCTTCCGTCGGCGACTGCGAGCGTCCGCCACGCTACGATAGCTGCCTCGGCGAAAAAAGAAGTACTCCGCCGCCCGAACATTGTGGC
ACGTTCAATCGCAAGAATCCATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCGGCGCTCATCCTACCGGCCACCATGGTGGTCATGATTCTGCTCCTTAGCCCAACTGCATGTTACACTGTTACATCTTTCCTACCAGTCAACAACTTCGA
CACTTCTGGTACAGGGAAATACCTCGTGGGTGAACAAGATATTCAGTCTGAGTTTTTGATGGAGTCGCACATGAGCCGAATCTTGGAAGAAACTCAAACCTTCGAAACCA
GCGCAACGAGTAATGCGACCCAACCTTCCGTCGGCGACTGCGAGCGTCCGCCACGCTACGATAGCTGCCTCGGCGAAAAAAGAAGTACTCCGCCGCCCGAACATTGTGGC
ACGTTCAATCGCAAGAATCCATGTTAG
Protein sequenceShow/hide protein sequence
MAAAALILPATMVVMILLLSPTACYTVTSFLPVNNFDTSGTGKYLVGEQDIQSEFLMESHMSRILEETQTFETSATSNATQPSVGDCERPPRYDSCLGEKRSTPPPEHCG
TFNRKNPC