; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012543 (gene) of Chayote v1 genome

Gene IDSed0012543
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L26
Genome locationLG10:5058158..5059025
RNA-Seq ExpressionSed0012543
SyntenySed0012543
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002284455.1 PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]5.3e-6995.21Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MS+PLS DLRSKYN RSMPIRKDDEVQ+VRGTFKGREGKVVQVYRRKWVIH+ERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_010102767.1 60S ribosomal protein L26-1 [Morus notabilis]4.1e-6995.21Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MS+PLS DLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]6.3e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_028772784.1 60S ribosomal protein L26-1-like [Prosopis alba]8.2e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQ+VRGT+KGR+GKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_038880918.1 60S ribosomal protein L26-1 [Benincasa hispida]1.4e-6996.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMS+PLS+DLRSKYNVRSMPIRKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A6J1HHW6 60S ribosomal protein L26-1-like3.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1INB1 60S ribosomal protein L26-12.6e-6995.21Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMS+PLS DLRSKYNVRSMPIRKDDEVQ+VRGT+KGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1KU52 60S ribosomal protein L26-1-like3.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A5AQ64 KOW domain-containing protein2.6e-6995.21Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MS+PLS DLRSKYN RSMPIRKDDEVQ+VRGTFKGREGKVVQVYRRKWVIH+ERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

W9RS71 60S ribosomal protein L26-12.0e-6995.21Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MS+PLS DLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-13.0e-6789.73Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRVIMSSPLS DLR KYNVRSMPIRKDDEVQIVRGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

P61254 60S ribosomal protein L262.8e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQ+VRG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

P61257 60S ribosomal protein L262.8e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQ+VRG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.9e-6183.45Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR++RK HFTA SS RRV MSSPLS DLR KYNVRSMPIRKDDE QIVRGT+KGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-25.7e-6686.3Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQ+VRGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein2.2e-6889.73Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRVIMSSPLS DLR KYNVRSMPIRKDDEVQIVRGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein4.1e-6786.3Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQ+VRGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGGGTTTCATCGTCCCGCCGCAAGAGCCGTAAGGCTCACTTCACAGCGCCGTCGAGCGTCCGCCGCGTTATCATGAGCTCACCTCTCTCCAACGA
CCTCCGGTCGAAGTACAACGTCCGATCCATGCCGATTCGGAAGGACGACGAGGTCCAAATCGTCCGTGGAACCTTCAAGGGCCGGGAAGGGAAGGTGGTGCAGGTTTACC
GTAGAAAGTGGGTCATCCACATCGAGCGCATCACTCGCGAGAAGGTTAACGGATCCACTGTCAACGTCGGCATCAACCCGTCGAAGGTCGTGATTACGAAGCTCAGGCTC
GATAAGGACCGCAAGTCGCTTCTGGATCGGAAGGGCAAGGGCCGCGCCGCCGCTGATAAGGATAAGGGAACTAAGTTCACTGCTGAGGATATCATGCAGAGCGTGGATTA
A
mRNA sequenceShow/hide mRNA sequence
AAAAAACCCTAACTTTATAAAACCTCGAAAACCCTAATCTCTGAGTCACCCTTCATTCGCCATTTCGCAGCTCAACCTTTTCCCCTTCCCCAACCCTTCCCCCTCCGCCG
CCGGCAGCCATGAAGTACAACCCTAGGGTTTCATCGTCCCGCCGCAAGAGCCGTAAGGCTCACTTCACAGCGCCGTCGAGCGTCCGCCGCGTTATCATGAGCTCACCTCT
CTCCAACGACCTCCGGTCGAAGTACAACGTCCGATCCATGCCGATTCGGAAGGACGACGAGGTCCAAATCGTCCGTGGAACCTTCAAGGGCCGGGAAGGGAAGGTGGTGC
AGGTTTACCGTAGAAAGTGGGTCATCCACATCGAGCGCATCACTCGCGAGAAGGTTAACGGATCCACTGTCAACGTCGGCATCAACCCGTCGAAGGTCGTGATTACGAAG
CTCAGGCTCGATAAGGACCGCAAGTCGCTTCTGGATCGGAAGGGCAAGGGCCGCGCCGCCGCTGATAAGGATAAGGGAACTAAGTTCACTGCTGAGGATATCATGCAGAG
CGTGGATTAATTTTGAAAATGGTGATGTTTTTTAAGTTGATAGTACTGTTTTTTGCTTTCGTAGTTATCTAGCGTGTTTTCTGTTCTGAGATATCAGGGAACAATTCCTC
GGATTTTTGGCTTTAATTGTCGACTTTAGAGGCGTTAATTTATGGTATTTTTGAATTACATTTTGGTATAGCATTGAGCTACTTTTCCTATTTGTTTGTTGTTGAATATT
TGTTTGATCAAGGATTTGAAGTTGCTTAGTTATATAGTAGACGACCCTTATTTTCCCCCCTATGAGGCAGGTTATGAGTTGGGCGTGGGTGGTTGAGT
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL
DKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD