; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012557 (gene) of Chayote v1 genome

Gene IDSed0012557
OrganismSechium edule (Chayote v1)
Descriptionnuclear transport factor 2-like
Genome locationLG04:46519517..46521392
RNA-Seq ExpressionSed0012557
SyntenySed0012557
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044570.1 nuclear transport factor 2-like [Cucumis melo var. makuwa]2.2e-1176Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FVD YY+TFDANRA L +LYQ NSML+FEGQKIQG++NIVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

XP_008454013.1 PREDICTED: nuclear transport factor 2-like [Cucumis melo]2.2e-1176Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FVD YY+TFDANRA L +LYQ NSML+FEGQKIQG++NIVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

XP_009601176.1 nuclear transport factor 2B-like isoform X3 [Nicotiana tomentosiformis]2.9e-1173.58Show/hide
Query:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        E  AK FVD YY+TFD NRAALA+LYQ +SMLSFEGQK QG+ NIVAKL++LP
Subjt:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

XP_009786987.1 PREDICTED: nuclear transport factor 2-like [Nicotiana sylvestris]7.6e-1275.47Show/hide
Query:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        E  AK FVD YY+TFD NRAALA+LYQ NSMLSFEGQK QG+ NIVAKL++LP
Subjt:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

XP_022979987.1 nuclear transport factor 2B [Cucurbita maxima]1.7e-1178Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FVD YY+TFDANRA LA+LYQ NSML+FEGQKIQG+ NIVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

TrEMBL top hitse value%identityAlignment
A0A1J6KAJ1 Nuclear transport factor 23.7e-1275.47Show/hide
Query:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        E  AK FVD YY+TFD NRAALA+LYQ NSMLSFEGQK QG+ NIVAKL++LP
Subjt:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

A0A1S4AQU4 nuclear transport factor 2-like3.7e-1275.47Show/hide
Query:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        E  AK FVD YY+TFD NRAALA+LYQ NSMLSFEGQK QG+ NIVAKL++LP
Subjt:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

A0A1U7X4G4 nuclear transport factor 2-like3.7e-1275.47Show/hide
Query:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        E  AK FVD YY+TFD NRAALA+LYQ NSMLSFEGQK QG+ NIVAKL++LP
Subjt:  EGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

A0A5D3CYL8 Nuclear transport factor 2-like1.1e-1176Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FVD YY+TFDANRA L +LYQ NSML+FEGQKIQG++NIVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

A0A6J1IQ79 nuclear transport factor 2B8.2e-1278Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FVD YY+TFDANRA LA+LYQ NSML+FEGQKIQG+ NIVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

SwissProt top hitse value%identityAlignment
Q8NJ52 Nuclear transport factor 21.2e-0756Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        A++F + YY TFD +RA LA LY+ NSML+FE     GT+NIV KL  LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

Q96VN3 Nuclear transport factor 26.9e-0856Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        A++FV  YY TFD NRA LA LY+ +SML+FE   IQG + I+ KL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

Q9C7F5 Nuclear transport factor 2B5.1e-1166Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        +K FV+ YY+TFD NR  LA LYQ  SML+FEGQKIQG  +IVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

Q9FZK4 Nuclear transport factor 2A6.0e-1270Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FV+ YY+TFDANR  L  LYQ  SML+FEGQKIQG+ NIVAKL+ LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

Q9XJ54 Nuclear transport factor 22.4e-0858Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FV+ YY TFD NR AL  LYQ  SML+FEGQ+  G + I  KL +LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like2.1e-0747.27Show/hide
Query:  VTEGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        + E  A  FV+ YY+ FD +R++L+ LY   S+L+FEGQ I G  NI  KL  LP
Subjt:  VTEGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

AT1G11570.2 NTF2-like2.1e-0747.27Show/hide
Query:  VTEGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        + E  A  FV+ YY+ FD +R++L+ LY   S+L+FEGQ I G  NI  KL  LP
Subjt:  VTEGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

AT1G27310.1 nuclear transport factor 2A4.3e-1370Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        AK FV+ YY+TFDANR  L  LYQ  SML+FEGQKIQG+ NIVAKL+ LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

AT1G27970.1 nuclear transport factor 2B3.6e-1266Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        +K FV+ YY+TFD NR  LA LYQ  SML+FEGQKIQG  +IVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP

AT1G27970.2 nuclear transport factor 2B3.6e-1266Show/hide
Query:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP
        +K FV+ YY+TFD NR  LA LYQ  SML+FEGQKIQG  +IVAKL++LP
Subjt:  AKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCATGGAAACCGTCACCGAAGGCGAGGCCAAGCGATTCGTCGATTCTTATTACAACACCTTCGACGCCAATCGAGCCGCCCTGGCCGATCTCTACCAGTTGAA
TTCCATGTTGTCATTTGAAGGCCAGAAGATTCAAGGCACATCCAACATTGTCGCCAAACTCTCTACCCTCCCCCCCTGCTCGTCTTCGTCACTGGCGATCTTCAATTTGC
CGGAGAACAGCATGATTTCAAATTCAATCAGCGTTTCGAGCCCTGAGATGCAGGTTATTCCACCAGTTTTGTTTACGGGCGCTCAGTTATTAGACATTTCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCATGGAAACCGTCACCGAAGGCGAGGCCAAGCGATTCGTCGATTCTTATTACAACACCTTCGACGCCAATCGAGCCGCCCTGGCCGATCTCTACCAGTTGAA
TTCCATGTTGTCATTTGAAGGCCAGAAGATTCAAGGCACATCCAACATTGTCGCCAAACTCTCTACCCTCCCCCCCTGCTCGTCTTCGTCACTGGCGATCTTCAATTTGC
CGGAGAACAGCATGATTTCAAATTCAATCAGCGTTTCGAGCCCTGAGATGCAGGTTATTCCACCAGTTTTGTTTACGGGCGCTCAGTTATTAGACATTTCAAATTGA
Protein sequenceShow/hide protein sequence
MNAMETVTEGEAKRFVDSYYNTFDANRAALADLYQLNSMLSFEGQKIQGTSNIVAKLSTLPPCSSSSLAIFNLPENSMISNSISVSSPEMQVIPPVLFTGAQLLDISN