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Sed0012584 (gene) of Chayote v1 genome

Gene IDSed0012584
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:30671177..30671494
RNA-Seq ExpressionSed0012584
SyntenySed0012584
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1570.77Show/hide
Query:  MVILLLFLVISEAKGIRLLDKELSKDEYYKKNGGDLFVTMKRKAPNKGLRNHYSHWLPGIQEDYH
        M +LLLFL+ISEA+GIRLLDK +SK++  K+NGGDL  TMK +APNK  R  YSHWLPGIQEDYH
Subjt:  MVILLLFLVISEAKGIRLLDKELSKDEYYKKNGGDLFVTMKRKAPNKGLRNHYSHWLPGIQEDYH
TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein3.4e-1763.86Show/hide
Query:  MVILLLFLVIS-EAKGIRLLDKELSKDEYYK-------KNGGDLFVTMKRKAPNKGLRNHYSHWLPGIQEDYHGPRSHKSKHH
        M +LLLFL+I  +A+GIRLL+K +SK EY K       KNGGD  +TMK++AP + LR  YSHWLPGIQEDYHGPRSHKS+HH
Subjt:  MVILLLFLVIS-EAKGIRLLDKELSKDEYYK-------KNGGDLFVTMKRKAPNKGLRNHYSHWLPGIQEDYHGPRSHKSKHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATTCTTCTTCTGTTCCTCGTCATCTCCGAAGCTAAAGGGATTCGGCTGTTGGATAAAGAACTCAGCAAAGATGAGTACTACAAGAAAAATGGTGGAGATTTGTT
TGTGACAATGAAGAGAAAAGCCCCAAATAAAGGCTTGAGAAATCATTATTCTCATTGGCTACCAGGCATCCAAGAAGATTATCATGGACCTAGAAGCCATAAATCTAAGC
ACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGATTCTTCTTCTGTTCCTCGTCATCTCCGAAGCTAAAGGGATTCGGCTGTTGGATAAAGAACTCAGCAAAGATGAGTACTACAAGAAAAATGGTGGAGATTTGTT
TGTGACAATGAAGAGAAAAGCCCCAAATAAAGGCTTGAGAAATCATTATTCTCATTGGCTACCAGGCATCCAAGAAGATTATCATGGACCTAGAAGCCATAAATCTAAGC
ACCATTAG
Protein sequenceShow/hide protein sequence
MVILLLFLVISEAKGIRLLDKELSKDEYYKKNGGDLFVTMKRKAPNKGLRNHYSHWLPGIQEDYHGPRSHKSKHH