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Sed0012594 (gene) of Chayote v1 genome

Gene IDSed0012594
OrganismSechium edule (Chayote v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationLG10:6090135..6091667
RNA-Seq ExpressionSed0012594
SyntenySed0012594
Gene Ontology termsNA
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039249.1 putative UPF0481 protein [Cucumis melo var. makuwa]1.4e-1133.51Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSASH
        I D SHHL HF+Y  IL+ P      +     L +       F       L     +  IQ   E   LIQ +L+L   I       KT    +IPSAS 
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSASH

Query:  LHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL
        L      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFE++A +NPP  A Y  LM GL
Subjt:  LHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL

KAG6592375.1 putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1233.84Show/hide
Query:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT
        Y   +D   I++QSHHL HF+YL IL      R    +       G L   FF  + S L+    +  +Q   E   LIQA+  L   + S C   G   
Subjt:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT

Query:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT
         S  +IPSA  L ++ V          D  F         E  RF      P   +P I  NAF+E +F+NL+AFEA   +NPP F+ Y+ LM GL T
Subjt:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT

XP_004141645.1 putative UPF0481 protein At3g02645 [Cucumis sativus]4.8e-1233.68Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT---FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPS
        I D SHHL HF+Y  IL+ P   R         +D+     +   F       L     +  IQ   E   LIQ +L+L   I       KT    +IPS
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT---FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPS

Query:  ASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ
        AS L      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFEA+A +NPP  A Y  LM GL  +S+
Subjt:  ASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ

XP_008459642.1 PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]1.5e-1334.9Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT--FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSA
        I D SHHL HF+Y  IL+ P    R + +  GL  D     +  F       L     +  IQ   E   LIQ +L+L   I       KT    +IPSA
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT--FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSA

Query:  SHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ
        SHL      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFE++A +NPP  A Y  LM GL  +S+
Subjt:  SHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ

XP_022925441.1 putative UPF0481 protein At3g02645 [Cucurbita moschata]8.2e-1233.84Show/hide
Query:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT
        Y   +D   I++QSHHL HF+YL IL      R    +       G L   FF  + S L+    +  +Q   E   LIQA+  L   + S C   G   
Subjt:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT

Query:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT
         S  +IPSA  L ++ V          D  F K+         RF      P   +P I  NAF+E +F+NL+AFEA   +NPP F+ Y+ LM GL T
Subjt:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT

TrEMBL top hitse value%identityAlignment
A0A0A0KSX9 Uncharacterized protein2.3e-1233.68Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT---FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPS
        I D SHHL HF+Y  IL+ P   R         +D+     +   F       L     +  IQ   E   LIQ +L+L   I       KT    +IPS
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT---FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPS

Query:  ASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ
        AS L      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFEA+A +NPP  A Y  LM GL  +S+
Subjt:  ASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ

A0A1S3CAN6 putative UPF0481 protein At3g026457.2e-1434.9Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT--FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSA
        I D SHHL HF+Y  IL+ P    R + +  GL  D     +  F       L     +  IQ   E   LIQ +L+L   I       KT    +IPSA
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPT--FFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSA

Query:  SHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ
        SHL      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFE++A +NPP  A Y  LM GL  +S+
Subjt:  SHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDTHSQ

A0A5D3BMY1 Putative UPF0481 protein6.7e-1233.51Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSASH
        I D SHHL HF+Y  IL+ P      +     L +       F       L     +  IQ   E   LIQ +L+L   I       KT    +IPSAS 
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSASH

Query:  LHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL
        L      F ST +GIL + F +T                   LT+P I+ + FT  L +NL+AFE++A +NPP  A Y  LM GL
Subjt:  LHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL

A0A6J1DUU3 putative UPF0481 protein At3g026451.5e-1133.17Show/hide
Query:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDG--------LLVPTFFQN------WCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFG
        I + SHHL HF+YL +L+ P +    L  QS    DG           P+ F +        + L     +  +Q   E   LIQ +  L R I     G
Subjt:  IMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDG--------LLVPTFFQN------WCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQCFG

Query:  HKTTSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL
         K T    IP AS L    VRF ST +GIL +RF +                    LT+P IN +AF++ L +NL+A+EA+A +NPP    Y+ +M GL
Subjt:  HKTTSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL

A0A6J1EC80 putative UPF0481 protein At3g026454.0e-1233.84Show/hide
Query:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT
        Y   +D   I++QSHHL HF+YL IL      R    +       G L   FF  + S L+    +  +Q   E   LIQA+  L   + S C   G   
Subjt:  YAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFALEIIQNFMELKDLIQAILKLKRIIKSQC--FGHKT

Query:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT
         S  +IPSA  L ++ V          D  F K+         RF      P   +P I  NAF+E +F+NL+AFEA   +NPP F+ Y+ LM GL T
Subjt:  TSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGLDT

SwissProt top hitse value%identityAlignment
P0C897 Putative UPF0481 protein At3g026452.2e-0739.13Show/hide
Query:  IPSASHLHKLPVRFASTVHGILDT-RFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL
        IPS S LHK  VRF  T HG + T  F    G F                 +PVIN +  TET+ +NL+A+EA     P VF  Y EL+ G+
Subjt:  IPSASHLHKLPVRFASTVHGILDT-RFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL

Arabidopsis top hitse value%identityAlignment
AT3G02645.1 Plant protein of unknown function (DUF247)1.5e-0839.13Show/hide
Query:  IPSASHLHKLPVRFASTVHGILDT-RFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL
        IPS S LHK  VRF  T HG + T  F    G F                 +PVIN +  TET+ +NL+A+EA     P VF  Y EL+ G+
Subjt:  IPSASHLHKLPVRFASTVHGILDT-RFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEALANINPPVFALYLELMKGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGTGTATAAGGAAACGGTTGAGGAGATCAACCAACATTATGATAGCTTCTGGAGAGTTAAGGCAACAAGATATTGGAAAAAATTCCTTCAAAGGAGGCCTTGT
TCTATCTAACAAGGTGGATCCTTATGCAGCGATTTCTGATCGTGCTGCAATTATGGACCAATCTCATCATTTGCAGCATTTCATGTACTTGTCCATTTTAATCTTCCCCT
ATATGTCTCGTAGAACGCTTACGCTTCAATCGGGATTAATCGATGATGGTCTCCTGGTCCCCACCTTTTTCCAAAACTGGTGTAGCAGATTGGAATTGGAATTTGCTCTA
GAAATCATCCAGAATTTCATGGAACTTAAAGACTTAATCCAGGCTATACTAAAACTCAAGAGGATAATTAAAAGCCAATGTTTTGGTCACAAAACCACATCCTTTAATGT
GATCCCCTCTGCTTCCCACCTTCATAAACTTCCCGTCCGCTTCGCGTCGACTGTCCATGGAATTCTAGACACTAGATTCACCAAAACCGAAGGCCATTTCGCTATCGAGC
AAAACCGTTTCGTTCTCTATGAAAATCCACCCATGCTCACTATACCTGTCATCAATTTCAATGCTTTTACAGAAACACTATTTCAAAATCTGTTAGCATTTGAGGCACTG
GCTAACATCAACCCACCTGTGTTTGCCCTTTATCTAGAGTTGATGAAAGGCCTTGATACGCACTCCCAAGGATGTACAAATTCTCAAGAAAAAAAGAATCATAATCAACC
ATTTGGACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGTGTATAAGGAAACGGTTGAGGAGATCAACCAACATTATGATAGCTTCTGGAGAGTTAAGGCAACAAGATATTGGAAAAAATTCCTTCAAAGGAGGCCTTGT
TCTATCTAACAAGGTGGATCCTTATGCAGCGATTTCTGATCGTGCTGCAATTATGGACCAATCTCATCATTTGCAGCATTTCATGTACTTGTCCATTTTAATCTTCCCCT
ATATGTCTCGTAGAACGCTTACGCTTCAATCGGGATTAATCGATGATGGTCTCCTGGTCCCCACCTTTTTCCAAAACTGGTGTAGCAGATTGGAATTGGAATTTGCTCTA
GAAATCATCCAGAATTTCATGGAACTTAAAGACTTAATCCAGGCTATACTAAAACTCAAGAGGATAATTAAAAGCCAATGTTTTGGTCACAAAACCACATCCTTTAATGT
GATCCCCTCTGCTTCCCACCTTCATAAACTTCCCGTCCGCTTCGCGTCGACTGTCCATGGAATTCTAGACACTAGATTCACCAAAACCGAAGGCCATTTCGCTATCGAGC
AAAACCGTTTCGTTCTCTATGAAAATCCACCCATGCTCACTATACCTGTCATCAATTTCAATGCTTTTACAGAAACACTATTTCAAAATCTGTTAGCATTTGAGGCACTG
GCTAACATCAACCCACCTGTGTTTGCCCTTTATCTAGAGTTGATGAAAGGCCTTGATACGCACTCCCAAGGATGTACAAATTCTCAAGAAAAAAAGAATCATAATCAACC
ATTTGGACAGTGA
Protein sequenceShow/hide protein sequence
MNKCIRKRLRRSTNIMIASGELRQQDIGKNSFKGGLVLSNKVDPYAAISDRAAIMDQSHHLQHFMYLSILIFPYMSRRTLTLQSGLIDDGLLVPTFFQNWCSRLELEFAL
EIIQNFMELKDLIQAILKLKRIIKSQCFGHKTTSFNVIPSASHLHKLPVRFASTVHGILDTRFTKTEGHFAIEQNRFVLYENPPMLTIPVINFNAFTETLFQNLLAFEAL
ANINPPVFALYLELMKGLDTHSQGCTNSQEKKNHNQPFGQ