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Sed0012601 (gene) of Chayote v1 genome

Gene IDSed0012601
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationLG11:4462120..4466750
RNA-Seq ExpressionSed0012601
SyntenySed0012601
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586044.1 hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4291.18Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GN
        GN
Subjt:  GN

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-4390.29Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEE++IVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]1.0e-4289.32Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]1.6e-4391.26Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]9.3e-4490.29Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDN+FEE+DI+ PNDFYQSRDAD+
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X15.0e-4389.32Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X21.6e-4189.32Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLADQKVENDAVVALTLRK DN+FEE++IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin5.5e-4289.11Show/hide
Query:  MYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGN
        MYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1FIC7 uncharacterized protein LOC1114442047.7e-4491.26Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685517.7e-4491.26Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G37640.1 ubiquitin 97.7e-0434.67Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLR
        M +++R    K T  +E +  +TT N+K K++     P   QRLI   +G+ LED +TLAD  ++ ++ + L LR
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLR

AT5G57860.1 Ubiquitin-like superfamily protein9.7e-3170.65Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF
        MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF

AT5G57860.2 Ubiquitin-like superfamily protein9.7e-3170.65Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF
        MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF

AT5G57860.3 Ubiquitin-like superfamily protein9.7e-3170.65Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF
        MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDF

AT5G57860.4 Ubiquitin-like superfamily protein9.4e-1865.15Show/hide
Query:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGTACATCCGAATCAAGCGCCATAAGACTACGTACTTCATCGAGTTTGATCCAATCGAGACAACTTTAAATATCAAGGAAAAACTAGAGTCCCTTGTTGATCA
ACCAGTAGTAGATCAGCGCTTGATCCTGGTAGAGAGTGGGGAAGTATTGGAGGATTCCAAGACACTGGCTGACCAAAAGGTTGAAAACGATGCAGTTGTTGCTTTAACGT
TGCGGAAAGATGATAACGAGTTCGAGGAGGTCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
GCCAACTCAGAATTTCCAATTGTTTAATTAAAAAAGAAAAGAAAAAAAAAAGGAGAAATATGATTCTTAACCGAGGTGGGATTAGTCCAACCGAGTCTCCAAACGCTATG
CGTACATTCCTTGTCATTTCATCGCGATGAACTGAACGAACTTTCCCAAGCAAGAGAAATCTCGCCGATTTCAGACGGCAGCAGTGGAGGCAGGATATATCGAAGTGTTG
ATCCATTAGTTCTTTTTTCAAGATGGCCATGTACATCCGAATCAAGCGCCATAAGACTACGTACTTCATCGAGTTTGATCCAATCGAGACAACTTTAAATATCAAGGAAA
AACTAGAGTCCCTTGTTGATCAACCAGTAGTAGATCAGCGCTTGATCCTGGTAGAGAGTGGGGAAGTATTGGAGGATTCCAAGACACTGGCTGACCAAAAGGTTGAAAAC
GATGCAGTTGTTGCTTTAACGTTGCGGAAAGATGATAACGAGTTCGAGGAGGTCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTG
GTAAGGACTGAAAAAAAATGTGCTTCTACTGTGGGGTAGTATATGATGTTTACTATCAATCATGTGGGTTGTATTGTTGAAATAACTTTTTTATCTGTTGCATGACATTG
AAAATGATAGATAAGAAAGTTTATTCTATGCAGGATTAGATATTGATAAATCCATGCATTCTCTTTGTTACCCAGTTACAATCGAGCAACCTTAACTATCCGATCCAAAC
TATGAGGGTTGGATTATAATTTTCTTTGAGTTTTGCTGGGTTAAAATTTGTGAGAATTGAAATTTTTGTTCGATTCTTGAGTTGATCATTTGGCTCGGGTTGACCAATTC
TCTTAGCATGGTGGCTGGGGACATGCACTATCAATAGTTCATGCTTCAGTTCAAACTTGGTGTCAAACAATTTTTCTTTATCTCTAATAAATTTAAG
Protein sequenceShow/hide protein sequence
MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW