; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012606 (gene) of Chayote v1 genome

Gene IDSed0012606
OrganismSechium edule (Chayote v1)
Descriptionras-related protein RABA4c-like
Genome locationLG04:38310666..38313969
RNA-Seq ExpressionSed0012606
SyntenySed0012606
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149604.1 ras-related protein RABA4c isoform X1 [Cucumis sativus]9.5e-11095.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHIARWLEELRGHADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENL FMETSALEATNVEAAFNTILTEIYRVIS+KALIAN+ETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ ASSGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

XP_008461787.1 PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]4.2e-11094.59Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDHIARWLEELRGHADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVIS+KAL+AN+ETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ ASSGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

XP_022949337.1 ras-related protein RABA4c-like [Cucurbita moschata]2.5e-11095.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHIARWLEELR HADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGG+SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ A+SGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

XP_022998498.1 ras-related protein RABA4c-like [Cucurbita maxima]3.8e-11195.5Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHI RWLEELR HADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQPA+SGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

XP_023525670.1 ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]2.5e-11095.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHIARWLEELR HADKNIVIMLIGNKSDL S R+VPTEDA EF+QMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ A+SGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW7 Uncharacterized protein4.6e-11095.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHIARWLEELRGHADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENL FMETSALEATNVEAAFNTILTEIYRVIS+KALIAN+ETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ ASSGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

A0A1S3CFD0 ras-related protein RABA4c isoform X12.1e-11094.59Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDHIARWLEELRGHADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVIS+KAL+AN+ETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ ASSGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

A0A6J1DGV8 ras-related protein RABA4d-like6.8e-10690.09Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDHIARWLEELRGHADKNIVIMLIGNKSDL S R+VPT+DA EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGG+SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQE   ASSGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

A0A6J1GBR1 ras-related protein RABA4c-like1.2e-11095.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHIARWLEELR HADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGG+SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQ A+SGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

A0A6J1KGX4 ras-related protein RABA4c-like1.9e-11195.5Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         TFDHI RWLEELR HADKNIVIMLIGNKSDL S R+VPTEDA EFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCCRS
        K TKIVVPGQEPQPA+SGCCRS
Subjt:  KSTKIVVPGQEPQPASSGCCRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP16.8e-9581.78Show/hide
Query:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARW
        QKIDYVFKVVLIGDSAVGKSQLL+RFARNEF+LDSKATIGVEFQT+TL ID + +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR +FDH+ARW
Subjt:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARW

Query:  LEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVPG
        LEELRGHADKNIVIMLIGNKSDL + R+VPTEDA EFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANEE DS G+SSLLK TKIVVPG
Subjt:  LEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVPG

Query:  QEP-QPASSGCCRS
        QEP  P  + CC S
Subjt:  QEP-QPASSGCCRS

Q40191 Ras-related protein Rab11A8.4e-8574.07Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR
        N KIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSK+TIGVEFQT+TLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR TFDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVP
        WLEELR HADKNIVI+LIGNK DLV+ R VPTEDA EFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+E   +G S+S L   KI++P
Subjt:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVP

Query:  G--QEPQPASSGCCRS
        G  QE     + CC++
Subjt:  G--QEPQPASSGCCRS

Q9FE79 Ras-related protein RABA4c1.4e-9579.09Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDH+ARWLEELRGHADKNIVIMLIGNK+DL + R VPTEDA EFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANEE +SGG SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCC
        + TKIVV G+E +    GCC
Subjt:  KSTKIVVPGQEPQPASSGCC

Q9FJN8 Ras-related protein RABA4a1.7e-8272.22Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+R TFDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL-KSTKIVV
        WLEELR HADKNIVI+LIGNKSDLV  R +PTEDA EFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+E+ ++G   SL  K   IV 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL-KSTKIVV

Query:  -PGQEPQPASSGCCRS
         PGQ     S+ CC S
Subjt:  -PGQEPQPASSGCCRS

Q9LH50 Ras-related protein RABA4d5.8e-9479.09Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDH+A+WLEELRGHADKNIVIMLIGNK DL S R VPTEDA EFAQ ENLFFMETSALEATNVE AF TILTEIYR+IS+K+L A+++ D+ G+SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCC
        K T+I++P ++      GCC
Subjt:  KSTKIVVPGQEPQPASSGCC

Arabidopsis top hitse value%identityAlignment
AT3G12160.1 RAB GTPase homolog A4D4.1e-9579.09Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDH+A+WLEELRGHADKNIVIMLIGNK DL S R VPTEDA EFAQ ENLFFMETSALEATNVE AF TILTEIYR+IS+K+L A+++ D+ G+SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCC
        K T+I++P ++      GCC
Subjt:  KSTKIVVPGQEPQPASSGCC

AT4G18430.1 RAB GTPase homolog A1E1.0e-6962.86Show/hide
Query:  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARWLEE
        DY+FK+VLIGDS VGKS LLSRF RNEFS++SK+TIGVEF T+++ +D+K IKAQ+WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+  TF+++ RWL+E
Subjt:  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARWLEE

Query:  LRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVPGQEP
        LR H D N+VIML+GNK+DL   R VPTE+A  F++ EN+FFMETSAL+ATNVE AF  +LT+IYRV+SRKAL       +G   SL K   I +  ++ 
Subjt:  LRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVPGQEP

Query:  QPA--SSGCC
          A  SSGCC
Subjt:  QPA--SSGCC

AT4G39990.1 RAB GTPase homolog A4B1.2e-8171.96Show/hide
Query:  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARWL
        K+DYVFKVVLIGDSAVGKSQLL+RFAR+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR TF+HI RWL
Subjt:  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARWL

Query:  EELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVP--
        EELR HADKNIVI+LIGNKSDL   R VPTEDA EFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  ++++ GS   L   KI++P  
Subjt:  EELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVP--

Query:  GQEPQPASSGCCRS
        GQE    +S CC S
Subjt:  GQEPQPASSGCCRS

AT5G47960.1 RAB GTPase homolog A4C9.8e-9779.09Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL
         +FDH+ARWLEELRGHADKNIVIMLIGNK+DL + R VPTEDA EFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANEE +SGG SSLL
Subjt:  PTFDHIARWLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL

Query:  KSTKIVVPGQEPQPASSGCC
        + TKIVV G+E +    GCC
Subjt:  KSTKIVVPGQEPQPASSGCC

AT5G65270.1 RAB GTPase homolog A4A1.2e-8372.22Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+R TFDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL-KSTKIVV
        WLEELR HADKNIVI+LIGNKSDLV  R +PTEDA EFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+E+ ++G   SL  K   IV 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLL-KSTKIVV

Query:  -PGQEPQPASSGCCRS
         PGQ     S+ CC S
Subjt:  -PGQEPQPASSGCCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTTGTGCTGATCGGAGATTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCGAG
GAATGAGTTTAGTTTGGATTCGAAGGCGACGATTGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGCC
AAGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCCGTGGGGGCCATGCTGGTCTACGACATGACAAAGCGTCCGACGTTCGATCATATAGCTAGGTGGTTA
GAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGTTTCTCACCGCATCGTTCCCACAGAAGATGCAAACGAGTTTGC
TCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCCACGAATGTCGAGGCAGCATTCAACACCATCCTGACAGAAATATACCGAGTTATAAGTAGAAAGG
CGCTCATTGCGAATGAGGAAACTGATTCCGGAGGAAGCTCATCACTCCTCAAATCGACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGCCTGCAAGCTCTGGCTGTTGC
AGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAAAAGAGGAACTGATCTCTCTTTTTCCTTATTCAAGTCTTCGCTAAATCCATTTTCTTCATTTCCCCACCAATTTTCGATCCAAACTAAATCATTCCTCCATTTTT
TTTCATGTTCTTCTCAATCTCAAATCTGTAGTATCAAAATCCATTCCTAATCGCATCAAGCGATCGATTGTTCTTCCTCTCGATCGATCGCTTGGTGTTCGATTTCCCCC
CCATTTTCGATTTCTAGGGTTTTGTTTCAACGATTGGATTAGATTTTGATAATTTCGTCTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTA
TTCAAGGTTGTGCTGATCGGAGATTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCGAGGAATGAGTTTAGTTTGGATTCGAAGGCGACGATTGGGGTTGAGTT
TCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGCCAAGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCCG
TGGGGGCCATGCTGGTCTACGACATGACAAAGCGTCCGACGTTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATAATGCTT
ATAGGGAACAAGTCCGATCTAGTTTCTCACCGCATCGTTCCCACAGAAGATGCAAACGAGTTTGCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGC
CACGAATGTCGAGGCAGCATTCAACACCATCCTGACAGAAATATACCGAGTTATAAGTAGAAAGGCGCTCATTGCGAATGAGGAAACTGATTCCGGAGGAAGCTCATCAC
TCCTCAAATCGACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGCCTGCAAGCTCTGGCTGTTGCAGAAGTTGACTGAGTATTCTACTTTGGTTTTACAATATTTTCAGA
TGAATTGCTTCTTCTCACAGCCAACACAAACATATCCCCCCTAACCTTCAAAACAAAAGAGCTAAAGAAGAAGAAAGAGGGAAACAAGTGTTGATAATTTCTATCTTATG
TTTTGTTTTGTTCTTTCAGGAGACTAGTGTACTTCATGCTATATCTCATTGTACAAAGGTTCAAATTCTGGTCCAAAACTTTGTAACAATTTTATTTTTATCAATCAAAA
TGTTTTCATTTTTTTTATATAAAAAAAGTGTAGTTCATACTCTTGATGGTTCCTTTACTCTAAACTTTTTGTTTAGAGGCTTTGTCACCAACATAAG
Protein sequenceShow/hide protein sequence
MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRPTFDHIARWL
EELRGHADKNIVIMLIGNKSDLVSHRIVPTEDANEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKSTKIVVPGQEPQPASSGCC
RS