CuGenDBv2

Gene ID	Sed0012631
Organism	Sechium edule (Chayote v1)
Description	NADH-ubiquinone oxidoreductase chain 5
Genome location	LG08:32992598..32995041
RNA-Seq Expression	Sed0012631
Synteny	Sed0012631
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]

5.8e-41

93.4

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]

5.8e-41

93.4

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_022153105.1 uncharacterized protein LOC111020687 [Momordica charantia]

2.6e-41

94.34

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIILAFLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]

5.8e-41

93.4

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_039057098.1 uncharacterized protein LOC120200284 [Hibiscus syriacus]

1.7e-40

90.57

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSNH WASVSFFSSTSN++SSRVDVV+FVIWEL+ILAFLVFS+VSLYFRHLQL FILVC+TMLLLLCMK+TKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIH9 Uncharacterized protein

2.8e-41

93.4

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X1

2.8e-41

93.4

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A5D2QK64 Uncharacterized protein

1.8e-40

89.62

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRS H WASVSFFSSTSN++SSRVDVV+FVIWEL+ILAFLVFSAVSLYFRH+QL FILVC+TMLLLLCMK+TKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A6J1DFV1 uncharacterized protein LOC111020687

1.3e-41

94.34

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRS H WASVSFFSSTSNI+SSRVDVVIFVIWELIILAFLVFSAVSLYFRH+QL FILVC+TMLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A6P6AWR8 uncharacterized protein LOC111312883 isoform X1

1.4e-40

90.57

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRS H WASVSFFSSTSN++SSRVDVV+FVIWELIILAFLVFSAVSLYFRH+QL FILVC+TMLLLLCMK+TKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G20460.1 unknown protein

1.9e-42

88.68

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRS H WASVSFFSSTSN SSSRVDVV+FVIWEL+ILAF VFSAVSLYF+ LQL FILVCVT+LLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein

8.1e-41

85.85

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Query:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRS H WASVSFFSSTSN SSSRVDVV+FVIWEL++LA +VFSAVSLYFR LQL FIL+CVT+LLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATTACTCGATCCAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAACCACCACTGGGCCTCCGTCTCCTTCTTCTCCTCCACCTCCAACATTTCCTCTTC
CAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCGGCCGTTTCGTTATACTTTCGGCATCTGCAGTTAACTTTTATTTTAG
TATGTGTCACAATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCGTTGTCCATGTGA

mRNA sequence

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ATTTTCTTAAATACTTTTTAATCATTTTGGTAGTTTGCCCCAAGATTTTTCTCAAGAAAGGCATGATGGGCCTTAAATATAGAACGAACGTGTAGGAGTGGAGCATAATA
GAGCTGATTAGGGCTGGAAAATCACAAAGCAAAATCAGAACCCAAACCCAAAAAAAGGTCCATTAGAGAGATTGGACAAATTCCAGAAGAAAAAAAAAAGGAAAAGTAAA
ATTAGGGAAGAACAAAAAAAGAGAGAAGAAGGAAGATCCTGGTTGGCCTGAACCTGAATCTGCAACGTGAAGGAGAGTTGGAATTGAAGGGTGATGCTTTGTGTGTCTCA
ATCGGTGTGTGGGTGAGTGCGTTGATTCCTCCATTATGATTACTCGATCCAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAACCACCACTGGGCCTCCGTC
TCCTTCTTCTCCTCCACCTCCAACATTTCCTCTTCCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCGGCCGTTTCGTT
ATACTTTCGGCATCTGCAGTTAACTTTTATTTTAGTATGTGTCACAATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAA
GGATGCTTCTTCCGTTGTCCATGTGAAAAACTGATAGTTGAAGAAGAGATATACTGAACTTTTCTATGTTATAAGTGCTTTGAATTATATTCACAAAAATTAGATTTGGT
CTCTTTCTCCTCCC

Protein sequence

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MITRSNLVEQLREYQIRSNHHWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHLQLTFILVCVTMLLLLCMKVTKQVRLARKKKRRMLLPLSM

Sed0012631 (gene) of Chayote v1 genome