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Sed0012665 (gene) of Chayote v1 genome

Gene IDSed0012665
OrganismSechium edule (Chayote v1)
DescriptionThioredoxin
Genome locationLG04:40487694..40488333
RNA-Seq ExpressionSed0012665
SyntenySed0012665
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051550.1 thioredoxin H1-like [Cucumis melo var. makuwa]3.8e-4680.53Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WC PCR M P+L +LA KMSN+V+ LKVD+D+LMSVANE+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

XP_004149943.1 thioredoxin H1 [Cucumis sativus]5.9e-4781.42Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTVRSWKQQLL+AKQ NKLVVV FTA WC PCR M P+L++LA KMSN+V FLKVD+D+LMSVA+E+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

XP_004149944.1 thioredoxin H-type [Cucumis sativus]1.0e-4374.78Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        MA++GKV+SCHTV SWKQ LL+A+Q NKLVVV FTA WCGPCR M PIL+ELAKKMSN+V+FLKVDID+LMS+A EFGV ++PSFQF KNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHVPY
        +K +L NT+SKH  Y
Subjt:  RKDVLHNTLSKHVPY

XP_008464900.1 PREDICTED: thioredoxin H1-like [Cucumis melo]3.8e-4680.53Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WC PCR M P+L +LA KMSN+V+ LKVD+D+LMSVANE+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

XP_038893273.1 thioredoxin H1-like [Benincasa hispida]4.5e-4782.46Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKM-SNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVG
        MAD+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WCGPCR M P+L++LA KM +NDV+FLKVD+D+LMSVANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKM-SNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDVLHNTLSKHV
        ARKDVLH+T+SKHV
Subjt:  ARKDVLHNTLSKHV

TrEMBL top hitse value%identityAlignment
A0A0A0KLS7 Thioredoxin domain-containing protein5.0e-4474.78Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        MA++GKV+SCHTV SWKQ LL+A+Q NKLVVV FTA WCGPCR M PIL+ELAKKMSN+V+FLKVDID+LMS+A EFGV ++PSFQF KNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHVPY
        +K +L NT+SKH  Y
Subjt:  RKDVLHNTLSKHVPY

A0A0A0KSB1 Thioredoxin domain-containing protein2.9e-4781.42Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTVRSWKQQLL+AKQ NKLVVV FTA WC PCR M P+L++LA KMSN+V FLKVD+D+LMSVA+E+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

A0A1S3CMM6 thioredoxin H1-like1.9e-4680.53Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WC PCR M P+L +LA KMSN+V+ LKVD+D+LMSVANE+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

A0A5A7U8S0 Thioredoxin H1-like1.9e-4680.53Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WC PCR M P+L +LA KMSN+V+ LKVD+D+LMSVANE+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

A0A5D3DCH1 Thioredoxin H1-like1.9e-4680.53Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        M D+GKVVSCHTV SWKQQLL+AKQ NKLVVV FTA WC PCR M P+L +LA KMSN+V+ LKVD+D+LMSVANE+GVGALPSFQFFKNGKLVDKFVGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        RKDVLH T+SKHV
Subjt:  RKDVLHNTLSKHV

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H15.2e-3053.21Show/hide
Query:  GKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDV
        G+V++CHTV +W +QL +A +   LVVV FTA WCGPCR + P   +LAKK+ N V+FLKVD D+L SVA+++ + A+P+F F K GK++DK VGA+KD 
Subjt:  GKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDV

Query:  LHNTLSKHV
        L +T++KH+
Subjt:  LHNTLSKHV

Q07090 Thioredoxin H-type 28.3e-2851.33Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        MA+ G+V+  HTV +W + L +     KL+VV FTA WCGPC+ +     ELAKKM   V FLKVD+D+L SVA ++ V A+P+F F K GK+VDK VGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKHV
        +KD L  T++KH+
Subjt:  RKDVLHNTLSKHV

Q39239 Thioredoxin H44.4e-2952.25Show/hide
Query:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR
        A+ G+V+ CHT   W  QL +AK+ NKL+V+ FTA WC PCR + PI ++LAKK  +  +F KVD+D+L SVA EFGV A+P+F F K G++VDK VGA 
Subjt:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR

Query:  KDVLHNTLSKH
        K+ L   + KH
Subjt:  KDVLHNTLSKH

Q39362 Thioredoxin H-type 22.3e-3052.25Show/hide
Query:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR
        A+ G+V+ CH +  W  QL  AKQ NKL+V+ FTA WC PCR + P+  +LAKK  +  +F KVD+D+L +VA EFGV A+P+F   K+G +VDK VGAR
Subjt:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR

Query:  KDVLHNTLSKH
        K+ LH T++KH
Subjt:  KDVLHNTLSKH

Q43636 Thioredoxin H-type4.0e-3052.68Show/hide
Query:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR
        A+ G+V+ CHTV +W +QL +      L+VV FTA WCGPCR + P L ELAKK+ N V FLKVD+D+L +VA+E+ V ++P+F F K GK++DK VGA+
Subjt:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR

Query:  KDVLHNTLSKHV
        KD L  T++KH+
Subjt:  KDVLHNTLSKHV

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein3.1e-3052.25Show/hide
Query:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR
        A+ G+V+ CHT   W  QL +AK+ NKL+V+ FTA WC PCR + PI ++LAKK  +  +F KVD+D+L SVA EFGV A+P+F F K G++VDK VGA 
Subjt:  ADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGAR

Query:  KDVLHNTLSKH
        K+ L   + KH
Subjt:  KDVLHNTLSKH

AT1G45145.1 thioredoxin H-type 51.3e-2847.32Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        MA  G+V++CHT+  W +++  A +  KL+V+ FTA WC PCR + P+  E+AKK +N VVF K+D+D+L +VA EF V A+P+F F K G ++D+ VGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKH
         KD ++  L KH
Subjt:  RKDVLHNTLSKH

AT1G69880.1 thioredoxin H-type 81.2e-2145.28Show/hide
Query:  VVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDVLH
        +V    +  WK +L   K  NKL+V++FTA WCGPC+ + P L+ELA K + DV F+K+D+D LMSV  EF +  LP+  F K G+ VD  VG + D L 
Subjt:  VVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDVLH

Query:  NTLSKH
          L+K+
Subjt:  NTLSKH

AT3G51030.1 thioredoxin H-type 13.7e-3153.21Show/hide
Query:  GKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDV
        G+V++CHTV +W +QL +A +   LVVV FTA WCGPCR + P   +LAKK+ N V+FLKVD D+L SVA+++ + A+P+F F K GK++DK VGA+KD 
Subjt:  GKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDV

Query:  LHNTLSKHV
        L +T++KH+
Subjt:  LHNTLSKHV

AT5G42980.1 thioredoxin 34.7e-2648.21Show/hide
Query:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA
        MA  G+V++CHTV  W ++L  A +  KL+V+ FTA WC PCR + P+  +LAKK   DVVF KVD+D+L +VA EF V A+P+F F K G++ +  VGA
Subjt:  MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGA

Query:  RKDVLHNTLSKH
         K+ +   L KH
Subjt:  RKDVLHNTLSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTTGGGGAAAGTGGTTTCTTGCCACACTGTTCGCTCATGGAAACAACAGCTTCTCCAAGCAAAACAACAAAATAAATTGGTCGTCGTGAAATTTACTGCAAT
GTGGTGCGGCCCTTGTCGTGCCATGGTTCCTATACTAGACGAGTTAGCAAAAAAGATGAGTAACGATGTCGTGTTCTTGAAAGTCGATATTGATCAACTCATGAGTGTTG
CAAATGAGTTTGGAGTGGGAGCTCTTCCCTCGTTTCAATTCTTCAAGAATGGGAAGTTGGTGGACAAGTTTGTGGGAGCAAGGAAAGATGTTTTGCACAACACTTTATCC
AAACATGTTCCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCTTTTCATTTTCTTCTCAGATATTAATTAAGCAAAACCTTTTTTTAGGCTATTTTTATTTCAATGGCGGATTTGGGGAAAGTGGTTTCTTGCCACACTGTTCGCTC
ATGGAAACAACAGCTTCTCCAAGCAAAACAACAAAATAAATTGGTCGTCGTGAAATTTACTGCAATGTGGTGCGGCCCTTGTCGTGCCATGGTTCCTATACTAGACGAGT
TAGCAAAAAAGATGAGTAACGATGTCGTGTTCTTGAAAGTCGATATTGATCAACTCATGAGTGTTGCAAATGAGTTTGGAGTGGGAGCTCTTCCCTCGTTTCAATTCTTC
AAGAATGGGAAGTTGGTGGACAAGTTTGTGGGAGCAAGGAAAGATGTTTTGCACAACACTTTATCCAAACATGTTCCATATTGAAG
Protein sequenceShow/hide protein sequence
MADLGKVVSCHTVRSWKQQLLQAKQQNKLVVVKFTAMWCGPCRAMVPILDELAKKMSNDVVFLKVDIDQLMSVANEFGVGALPSFQFFKNGKLVDKFVGARKDVLHNTLS
KHVPY