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Sed0012668 (gene) of Chayote v1 genome

Gene IDSed0012668
OrganismSechium edule (Chayote v1)
Descriptionmaternal effect embryo arrest 9
Genome locationLG04:30934007..30934944
RNA-Seq ExpressionSed0012668
SyntenySed0012668
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0015074 - DNA integration (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149957.1 uncharacterized protein LOC101218253 [Cucumis sativus]3.1e-4778.38Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAA+ELQ +NE QDAEIAM QA+DYLDSV    MDEFRRFE+EFD MAEAELQ+L+D+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAA+ VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
XP_022922756.1 uncharacterized protein LOC111430656 [Cucurbita moschata]1.8e-4779.73Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQAL           DL KLFE+EAYKSWAA ELQL+NEAQ+AEIAM +A+DYLDSV    MDEFRRFE+EFD MAEAELQELVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
XP_022985079.1 uncharacterized protein LOC111483158 [Cucurbita maxima]2.8e-4879.73Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAA ELQL+NEAQ+AEIAM QA+DYLDSV    MDEFRRFE+EFD MAE ELQELVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA +ASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
XP_023551868.1 uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo]7.4e-4981.08Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAA ELQL+NEAQ+AEIAM QA+DYLDSV    MDEFRRFE+EFD MAEAELQELVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
XP_038885707.1 uncharacterized protein LOC120075975 [Benincasa hispida]2.5e-4981.08Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAAMELQ +NE QDAEIAMHQA+DYLDSV    MDEFRRFE+EFD MAEAELQEL+D+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
TrEMBL top hitse value%identityAlignment
A0A0A0LAB6 Uncharacterized protein1.5e-4778.38Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAA+ELQ +NE QDAEIAM QA+DYLDSV    MDEFRRFE+EFD MAEAELQ+L+D+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAA+ VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
A0A6J1E4Z9 uncharacterized protein LOC1114306568.8e-4879.73Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQAL           DL KLFE+EAYKSWAA ELQL+NEAQ+AEIAM +A+DYLDSV    MDEFRRFE+EFD MAEAELQELVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
A0A6J1FR93 uncharacterized protein LOC1114477208.3e-4676.35Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSD+AL           DL KLFE+EAY SWAA+ELQ +NE +DAEIAM QA+DYLDSV    MDEFRRFE+EFD MAEAELQ+L+D+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
A0A6J1IXX5 uncharacterized protein LOC111481629 isoform X12.2e-4677.03Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSVM----DEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSD+AL           DL KLFE+EAY SWAA+ELQ +NE +DAEIAMHQA+DYLDSVM    DEFRRFE+EFD MAE ELQ+LVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSVM----DEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA VASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
A0A6J1JCA1 uncharacterized protein LOC1114831581.4e-4879.73Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE
        MEALISQFTFLSDQALH          DL KLFE+EAYKSWAA ELQL+NEAQ+AEIAM QA+DYLDSV    MDEFRRFE+EFD MAE ELQELVD+SE
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSV----MDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
        KA KMGSLMEKAAA +ASKRYMEAA+NSATASMRSAWKAISS+KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60870.1 maternal effect embryo arrest 93.6e-2548.65Show/hide
Query:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDS----VMDEFRRFEDEFDWMAEAELQELVDQSE
        MEALI  FT LSDQAL           DL +LFEV++YK+WAA+E + + E ++AE ++ +A+  LD      M+E+RR  +E + M  AEL+EL +++E
Subjt:  MEALISQFTFLSDQALHG---------DLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDS----VMDEFRRFEDEFDWMAEAELQELVDQSE

Query:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS
         A + G+LMEK AA VA+KR++ AA+ SA ASMRSAWK  + +KVHPS
Subjt:  KACKMGSLMEKAAAVVASKRYMEAALNSATASMRSAWKAISSSKVHPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCTCATCTCGCAGTTCACCTTCCTCTCCGATCAAGCTCTTCACGGTGACCTCACAAAGCTCTTCGAGGTCGAAGCTTACAAGTCCTGGGCCGCCATGGAGCT
CCAACTCAAGAACGAGGCTCAAGATGCCGAGATCGCAATGCACCAGGCCAAGGATTATCTAGATTCCGTCATGGATGAGTTCAGAAGGTTTGAGGATGAGTTTGATTGGA
TGGCCGAGGCCGAGCTCCAAGAACTCGTCGACCAGTCTGAGAAGGCGTGCAAGATGGGCAGTTTGATGGAGAAGGCAGCCGCAGTAGTTGCTTCCAAAAGGTACATGGAG
GCGGCGTTGAACTCGGCTACCGCTTCTATGAGATCGGCATGGAAGGCCATTTCATCCAGTAAGGTTCATCCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTCAATTAAACTTTTTGAGATGCTTTAAATTCCACAAACTATGTTCCATCACTCTGCTCCCACTGTTCTAAAGTTCTTCACTGCCTCATCAAAGTTCTCTATTTTTCTGA
TTGAATCCTTCATTCTCATTCTCAACCCTCCATTACCCACTTTTCTTCATCTTCCCAAGATCCATGGAAGCTCTCATCTCGCAGTTCACCTTCCTCTCCGATCAAGCTCT
TCACGGTGACCTCACAAAGCTCTTCGAGGTCGAAGCTTACAAGTCCTGGGCCGCCATGGAGCTCCAACTCAAGAACGAGGCTCAAGATGCCGAGATCGCAATGCACCAGG
CCAAGGATTATCTAGATTCCGTCATGGATGAGTTCAGAAGGTTTGAGGATGAGTTTGATTGGATGGCCGAGGCCGAGCTCCAAGAACTCGTCGACCAGTCTGAGAAGGCG
TGCAAGATGGGCAGTTTGATGGAGAAGGCAGCCGCAGTAGTTGCTTCCAAAAGGTACATGGAGGCGGCGTTGAACTCGGCTACCGCTTCTATGAGATCGGCATGGAAGGC
CATTTCATCCAGTAAGGTTCATCCTTCTTGAAGTTGTCATTATATCTCTCTGGTAACTGTTGCTTTTCATTTCTTAGAGAATTGAGATCTACTTGTACTCTGCTTTCAGA
AGGAGAAGAGACAATCTGACTGTAGAAATAATGCATAAACAACTCCAAGTTCATACTTCAATTATCAATGTTCCTAGATATAAATTCTACTGTGATAAAACTTCTAGAAG
CATCCTACTTATTGGGGGTAAAAAAAGAAACGAACAACCTGACTTACTCGGACTACTCAATCTAAACCGTAAGAGTTGGATTGATTCTTAGATTGACTACTTTTTTACTC
GTTCAATCCAATCCAGCTCAAACTAAAAATGATATATATTATATTACATATATCAGAC
Protein sequenceShow/hide protein sequence
MEALISQFTFLSDQALHGDLTKLFEVEAYKSWAAMELQLKNEAQDAEIAMHQAKDYLDSVMDEFRRFEDEFDWMAEAELQELVDQSEKACKMGSLMEKAAAVVASKRYME
AALNSATASMRSAWKAISSSKVHPS