CuGenDBv2

Gene ID	Sed0012690
Organism	Sechium edule (Chayote v1)
Description	F-box/LRR-repeat protein 3
Genome location	LG02:33379191..33382225
RNA-Seq Expression	Sed0012690
Synteny	Sed0012690
Gene Ontology terms	NA
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK24927.1 F-box/LRR-repeat protein 3 [Cucumis melo var. makuwa]

2.4e-92

44.15

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIEPTNPFDL+SDEI+F ILDLL+S+ IDL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQLTHLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+ IG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FS+
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

XP_008442360.1 PREDICTED: F-box/LRR-repeat protein 3 [Cucumis melo]

2.4e-92

44.15

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIEPTNPFDL+SDEI+F ILDLL+S+ IDL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQLTHLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+ IG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FS+
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

XP_023527521.1 F-box/LRR-repeat protein 3 isoform X1 [Cucurbita pepo subsp. pepo]

8.3e-93

44.33

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        ++F EPTNPFDL+SDEIIF ILDLLSS+ IDL SFS+A KSFY VEAKHRK+LKPLR EHLP+VLKR+TQL HLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
          S +LSYM I ++CLPS+L+L +LEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G VI Y GLKAIG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
        RCHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LL+I+HGC DLEMIN     ++ D  FSS
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MISLA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

XP_023527522.1 F-box/LRR-repeat protein 3 isoform X2 [Cucurbita pepo subsp. pepo]

8.3e-93

44.33

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        ++F EPTNPFDL+SDEIIF ILDLLSS+ IDL SFS+A KSFY VEAKHRK+LKPLR EHLP+VLKR+TQL HLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
          S +LSYM I ++CLPS+L+L +LEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G VI Y GLKAIG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
        RCHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LL+I+HGC DLEMIN     ++ D  FSS
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MISLA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

XP_038903892.1 F-box/LRR-repeat protein 3 [Benincasa hispida]

1.1e-92

45.21

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Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKF+EPTNPFDLISDEIIF ILDLLS + +DL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQLTHLDFSLS RVT GSLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGG--------------NKTPISRLKK----------------------------
          S +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG               + T +S L +                            
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGG--------------NKTPISRLKK----------------------------

Query:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
           ++     VI Y GLKAIG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CH LEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FSS
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ + +  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDB4 Uncharacterized protein

1.3e-91

43.79

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIE TNPFDLISDEIIF ILDLL+S+ IDL SFS+  KSFY+VEAKHRKILKPLR EHLPSVL+R+TQLTHLDFSLS RVT  SL I           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCL VIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+AIG    SLS+LSLSKCV VTDE  +S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FSS
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

A0A1S3B698 F-box/LRR-repeat protein 3

1.2e-92

44.15

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIEPTNPFDL+SDEI+F ILDLL+S+ IDL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQLTHLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+ IG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FS+
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

A0A5A7TS38 F-box/LRR-repeat protein 3

4.4e-92

43.97

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIEPTNPFDL+SDEI+F ILDLL+S+ IDL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQL HLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+ IG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FS+
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

A0A5D3DMT0 F-box/LRR-repeat protein 3

1.2e-92

44.15

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        QKFIEPTNPFDL+SDEI+F ILDLL+S+ IDL SFS+  KSFY VEAKHRKILKPLR EHLPSVLKR+TQLTHLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
            +LSYM I ++CLPS+L+L YLEDLVLE CFGIDDDCLAVIRYG                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ
        + +++   G V+ Y GL+ IG   VSLSELSLSKCV VTDE   S                                                  ILIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLS--------------------------------------------------ILIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
         CHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     +I D  FS+
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MI LA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

A0A6J1IYK1 F-box/LRR-repeat protein 3

3.4e-92

44.15

Show/hide

Query:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------
        Q+F EPTNPFDL+SDEIIF ILDLLSS+ IDL SFS+A KSFY VEAKHRK+LKPLR EHLP+VLKR+TQL HLDFSLS RVT  SLAI           
Subjt:  QKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI-----------

Query:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------
            RSKFF A  LL+LAT C N V+IDLSNAT+LR+A AVALAKAKNLEKLW G                                             
Subjt:  ----RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG---------------------------------------------

Query:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR
          S +LSYM I ++CLPS+L+L +LEDLVLE CFGIDDDCLAVIR+G                                              N      
Subjt:  --SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYG---------------------------------------------GNKTPISR

Query:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ
        + +++   G V  Y GLKAIG   VSLSELSL KCV VTDE   SI                                                  LIG+
Subjt:  LKKNIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
        RCHLLEEL+LTDNEI NEG   S S CSK SI KLGICLN ND  L                    + DS LLAI+HGC DLEMIN     ++ D  FSS
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL
        L KCSR +       P     GL+ +    ++ +++  K     D+A MISLA FSQNL Q  L
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQSEL

SwissProt top hits

e value

%identity

Alignment

Q8RWU5 F-box/LRR-repeat protein 3

8.7e-53

32.44

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Query:  KFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI------------
        K I    PFDL+S+E++FIILDL+S +  DL SFS+  KSFY +E+KHR  LKPLR ++LP +L R+   T LD +   RVT  +L++            
Subjt:  KFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI------------

Query:  ---RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG----------------------------------------------
           RS  F A  LL LA KC+N V+IDLSNAT++R+A A  +A+A++LE+L  G                                              
Subjt:  ---RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG----------------------------------------------

Query:  -SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGGNKTP-----------------------------------------ISRLKK--
         + +LSY+PI  +CL  +L+L +LE+L+LE CFG+DDD L  +R+                                                S LKK  
Subjt:  -SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGGNKTP-----------------------------------------ISRLKK--

Query:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ
           +I   G  +   GLKAIG    SL E+SLSKCV VTDE   S+                                                  LIGQ
Subjt:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
        +C LLEEL+LTDNEI +EG   S S C   S  KLGICLN  D  L                    + D  +  I  GC+ LE IN     +I D    S
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQ
        L KCS  +   +   P     GL+  + R +   KV  K     ++A +++LA FSQNL Q
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G01720.1 RNI-like superfamily protein

6.2e-54

32.44

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Query:  KFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI------------
        K I    PFDL+S+E++FIILDL+S +  DL SFS+  KSFY +E+KHR  LKPLR ++LP +L R+   T LD +   RVT  +L++            
Subjt:  KFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAI------------

Query:  ---RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG----------------------------------------------
           RS  F A  LL LA KC+N V+IDLSNAT++R+A A  +A+A++LE+L  G                                              
Subjt:  ---RSKFFWALRLLNLATKCMNSVKIDLSNATKLRNAVAVALAKAKNLEKLWSG----------------------------------------------

Query:  -SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGGNKTP-----------------------------------------ISRLKK--
         + +LSY+PI  +CL  +L+L +LE+L+LE CFG+DDD L  +R+                                                S LKK  
Subjt:  -SSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGGNKTP-----------------------------------------ISRLKK--

Query:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ
           +I   G  +   GLKAIG    SL E+SLSKCV VTDE   S+                                                  LIGQ
Subjt:  ---NIYWFGWVIVYYGLKAIGKNGVSLSELSLSKCVDVTDEVFLSI--------------------------------------------------LIGQ

Query:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS
        +C LLEEL+LTDNEI +EG   S S C   S  KLGICLN  D  L                    + D  +  I  GC+ LE IN     +I D    S
Subjt:  RCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDL--------------------LPDSLLLAIVHGCLDLEMIN-----NIIDALFSS

Query:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQ
        L KCS  +   +   P     GL+  + R +   KV  K     ++A +++LA FSQNL Q
Subjt:  LCKCSRPEDDRNSRMPAYRILGLSNSSWRLQVTKKVRFKS----DEADMISLARFSQNLGQ

Sequences

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CDS sequence

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ATGCAGAAATTTATTGAACCCACAAACCCTTTTGATCTGATTTCAGACGAAATCATTTTCATAATTCTCGACTTATTGAGCTCTGATTCAATTGATCTCAACTCATTCTC
CGTAGCGCACAAGTCATTTTACTTCGTTGAAGCAAAGCACCGCAAAATCCTCAAACCTCTCCGTTTTGAGCATCTTCCTTCTGTTCTTAAGCGATTTACACAATTGACCC
ATCTTGATTTTTCCCTCTCCCTTCGTGTCACTGGCGGCTCCTTGGCCATTAGGTCTAAATTCTTTTGGGCTCTTAGGTTGTTGAATTTGGCCACTAAATGTATGAATTCG
GTGAAGATCGACTTGTCAAACGCCACAAAACTCAGAAATGCGGTGGCCGTAGCGTTAGCGAAGGCGAAGAATCTTGAGAAGTTGTGGTCGGGGAGTTCGGAACTCTCCTA
TATGCCTATCATGGACGAATGCTTACCATCCATGTTGAGGCTCATGTATCTTGAAGATTTGGTGTTAGAGAGATGCTTTGGCATAGACGATGACTGCCTTGCTGTTATTA
GATATGGAGGCAACAAAACTCCGATTTCTCGATTGAAAAAAAATATATATTGGTTTGGCTGGGTTATTGTATACTATGGACTCAAAGCCATAGGAAAAAATGGTGTATCG
CTGAGTGAACTGAGCTTGAGTAAATGTGTTGATGTGACTGATGAAGTCTTTCTCTCTATCTTGATTGGACAACGATGCCATTTGCTCGAGGAGCTTAATTTAACTGACAA
CGAAATCGGCAATGAAGGTTCTTCTTTTTCCTCTTCTGGGTGTTCCAAATTCTCCATTTTTAAGCTAGGAATTTGTCTGAATCCTAATGACGTGGACTTGTTACCCGATT
CTCTACTCTTGGCAATCGTCCATGGTTGCCTAGATCTTGAAATGATAAATAATATCATAGATGCGTTGTTTTCATCCTTATGTAAATGCTCAAGACCTGAAGACGATCGA
AACTCGAGGATGCCTGCTTATCGCATCTTGGGGCTTAGTAACAGCAGTTGGAGGCTGCAAGTTACTAAGAAGGTTAGATTTAAAAGTGATGAAGCAGACATGATCTCCCT
TGCTCGTTTCTCTCAAAACCTGGGACAGTCTGAGTTGGATCCCAAGTGTTGGAAGTTTGCAGTTGGAAGATGA

mRNA sequence

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Protein sequence

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MQKFIEPTNPFDLISDEIIFIILDLLSSDSIDLNSFSVAHKSFYFVEAKHRKILKPLRFEHLPSVLKRFTQLTHLDFSLSLRVTGGSLAIRSKFFWALRLLNLATKCMNS
VKIDLSNATKLRNAVAVALAKAKNLEKLWSGSSELSYMPIMDECLPSMLRLMYLEDLVLERCFGIDDDCLAVIRYGGNKTPISRLKKNIYWFGWVIVYYGLKAIGKNGVS
LSELSLSKCVDVTDEVFLSILIGQRCHLLEELNLTDNEIGNEGSSFSSSGCSKFSIFKLGICLNPNDVDLLPDSLLLAIVHGCLDLEMINNIIDALFSSLCKCSRPEDDR
NSRMPAYRILGLSNSSWRLQVTKKVRFKSDEADMISLARFSQNLGQSELDPKCWKFAVGR

Sed0012690 (gene) of Chayote v1 genome