; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012705 (gene) of Chayote v1 genome

Gene IDSed0012705
OrganismSechium edule (Chayote v1)
DescriptionComplex 1 LYR protein
Genome locationLG03:10811203..10814850
RNA-Seq ExpressionSed0012705
SyntenySed0012705
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]9.5e-6988.31Show/hide
Query:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        +RL+GKCLN   HK+ LACN I FHPRVLHNGPDTIDELLDRHVVKKEKS+NDEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ
        ENARKEFE+ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDK+Q G DQ
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]5.2e-6785.06Show/hide
Query:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        MRL+ KC+    HKN LACN + FHPR+LHNGPDTIDELLDRHVVKKEKS++D+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ
        +NARKEFEDAR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ+QEIDK+QSGRD+
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ

XP_023545212.1 uncharacterized protein LOC111804691 [Cucurbita pepo subsp. pepo]9.8e-6684.42Show/hide
Query:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        MRL+ KC+    HKN LACN I + PR LHNGPDTIDELLDRHVVKKEKS++D+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ
        +NARKEFEDAR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ+QEIDK+QSGRD+
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]5.7e-6683.97Show/hide
Query:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
        MRL+GK LN    HKN L C+ I FHPRVLHNGPDT++ELLDRHVVKKEK ++DEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRDVL
Subjt:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL

Query:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV
        RENARKEFEDAR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ++EIDK+Q GRDQ+
Subjt:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]3.3e-6987.74Show/hide
Query:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        MRL+GKCLN   HKN L CN I FHPRVLHNGPDT+ ELLDRHVVKKEKS++DE+DELITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV
        +NARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQ QEIDK+Q+GRDQ+
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein2.8e-6683.97Show/hide
Query:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
        MRL+GK LN    HKN L C+ I FHPRVLHNGPDT++ELLDRHVVKKEK ++DEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRDVL
Subjt:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL

Query:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV
        RENARKEFEDAR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ++EIDK+Q GRDQ+
Subjt:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV

A0A1S4DWJ1 uncharacterized protein LOC1034885698.9e-6583.33Show/hide
Query:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
        MRL+GK LN     KN L C+ I FHPRVLHNGPDT++ELLDRHVVKKEKS +D+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRDVL
Subjt:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL

Query:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV
        R+NARKEFEDAR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ++EIDK+QSGRDQ+
Subjt:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV

A0A5A7VCD6 Complex 1 LYR protein8.9e-6583.33Show/hide
Query:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
        MRL+GK LN     KN L C+ I FHPRVLHNGPDT++ELLDRHVVKKEKS +D+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRDVL
Subjt:  MRLLGKCLN----HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVL

Query:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV
        R+NARKEFEDAR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ++EIDK+QSGRDQ+
Subjt:  RENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV

A0A6J1CRY1 uncharacterized protein LOC1110140194.6e-6988.31Show/hide
Query:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        +RL+GKCLN   HK+ LACN I FHPRVLHNGPDTIDELLDRHVVKKEKS+NDEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCLN---HKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ
        ENARKEFE+ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQ QEIDK+Q G DQ
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623392.5e-6785.06Show/hide
Query:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        MRL+ KC+    HKN LACN + FHPR+LHNGPDTIDELLDRHVVKKEKS++D+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCL---NHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ
        +NARKEFEDAR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ+QEIDK+QSGRD+
Subjt:  ENARKEFEDARYESDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein2.4e-4673.02Show/hide
Query:  RVLHNGPDTIDELLDRHVVKKEKSYNDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARYESDPEIVTRLLIG
        R LH GPDT++ELL+RH+ KKEK   D D+ E + +RRLTSTRREALSLYRDILRATRFF W DSRG LWRDVLRENARKEFE AR+E+DPE++TRLLIG
Subjt:  RVLHNGPDTIDELLDRHVVKKEKSYNDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARYESDPEIVTRLLIG

Query:  GRDAVQSALDKLAEKQKQEIDKRQSG
        G DAV SALDKLAEKQ++ I+K++ G
Subjt:  GRDAVQSALDKLAEKQKQEIDKRQSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTGCTGGGGAAATGTTTAAATCATAAGAATCTTCTGGCTTGCAATAATATTGTTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTT
AGACAGGCATGTGGTTAAGAAAGAAAAGTCCTATAATGATGAAGATGATGAGTTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTCTAAGTCTCTACCGAG
ACATTCTCCGTGCAACTCGGTTCTTTATGTGGCCAGACTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCTCGGAAGGAGTTCGAGGATGCCCGCTATGAG
TCCGATCCAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCAGCTCTTGATAAGCTTGCAGAGAAGCAGAAGCAGGAGATTGATAAGAGGCAAAG
TGGTCGAGATCAAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTAATTAATTTTTTAGCTATATTTAAATTTTTTCTAAATTTTTGATTTTTTTTTAACCCAAATAAAATATATTTTGGTTTACTCTTCCAAATCTCTAGACTCTTTCCC
CAGTTCCCGCGAACTCGGCCCTTTCATGAATTTCCCTCTCGCCTGCTGTGTATCGGCAGAATCATCAATTGCGCGGTTCTAAAATCCTCATCTCGATCCATATTCCCTGT
CCTCAATCTCACTTGCTTGGATCCTTCAAGGAAAATACAAGAGCAGTAACTTGAGACATTGATTATGACTATAAGCTGTCCACAATCAAGATAGGGAAGATTGACTGTTA
TCGGGCGCAAACCCGATTATAAGTAAATCATTTGGCATTGTCCTATTGAGATCAAGGGAATTATTTAAATCATCCAGTTGACCTATGCAGTGCAGGGGTGACCATGAGGC
TGCTGGGGAAATGTTTAAATCATAAGAATCTTCTGGCTTGCAATAATATTGTTTTCCACCCTCGAGTTTTGCATAATGGTCCAGACACAATAGATGAACTTTTAGACAGG
CATGTGGTTAAGAAAGAAAAGTCCTATAATGATGAAGATGATGAGTTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTCTAAGTCTCTACCGAGACATTCT
CCGTGCAACTCGGTTCTTTATGTGGCCAGACTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCTCGGAAGGAGTTCGAGGATGCCCGCTATGAGTCCGATC
CAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCAGCTCTTGATAAGCTTGCAGAGAAGCAGAAGCAGGAGATTGATAAGAGGCAAAGTGGTCGA
GATCAAGTCTGATCTATCATATGGTTATTCTGATCTCAAGCTATTGCAATTGAAGTTAAAGTCTGGTGGTTGGGTCTTTGTTTTCTTTGTTTTCAAAGTAACCCTTTTTG
TATTATGTAAGTTTTAATATATTAGATTATCGACATAATAAAATTTATCGAATTTGTGAGTTGATTGACGAC
Protein sequenceShow/hide protein sequence
MRLLGKCLNHKNLLACNNIVFHPRVLHNGPDTIDELLDRHVVKKEKSYNDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARYE
SDPEIVTRLLIGGRDAVQSALDKLAEKQKQEIDKRQSGRDQV