; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012773 (gene) of Chayote v1 genome

Gene IDSed0012773
OrganismSechium edule (Chayote v1)
DescriptionStructural maintenance of chromosomes protein
Genome locationLG13:1507854..1511373
RNA-Seq ExpressionSed0012773
SyntenySed0012773
Gene Ontology termsGO:0007076 - mitotic chromosome condensation (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000785 - chromatin (cellular component)
GO:0000793 - condensed chromosome (cellular component)
GO:0000796 - condensin complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003395 - RecF/RecN/SMC, N-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067664.1 structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa]4.8e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

XP_004148146.1 structural maintenance of chromosomes protein 2-1 [Cucumis sativus]4.8e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

XP_008439082.1 PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-1-like [Cucumis melo]4.8e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

XP_022141053.1 structural maintenance of chromosomes protein 2-1-like isoform X1 [Momordica charantia]8.2e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

XP_022141054.1 structural maintenance of chromosomes protein 2-1-like isoform X2 [Momordica charantia]8.2e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

TrEMBL top hitse value%identityAlignment
A0A0A0L9F1 Structural maintenance of chromosomes protein2.3e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

A0A1S3AXY4 Structural maintenance of chromosomes protein2.3e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

A0A5D3DJK7 Structural maintenance of chromosomes protein2.3e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER+RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

A0A6J1CHH2 structural maintenance of chromosomes protein 2-1-like isoform X24.0e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

A0A6J1CJE8 Structural maintenance of chromosomes protein4.0e-4894.23Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA+NLQELVYKQG+AGITKATVSVVFDNSER RSPLG EDHQE
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

SwissProt top hitse value%identityAlignment
O95347 Structural maintenance of chromosomes protein 21.1e-3976.92Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIK I LEGFKSYA RT V GFDP FNAITGLNGSGKSNIL SICF+LGI+NL QVRA+NLQ+LVYK G+AGITKA+VS+ FDNS++ +SPLG E H E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

P50533 Structural maintenance of chromosomes protein 21.2e-3873.08Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MH+K I ++GFKSYA RT + GFDP FNAITGLNGSGKSNIL SICF+LGI+NL QVRA+NLQ+LVYK G+AGITKATVS+ FDN ++ +SPLG E H E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

Q8CG48 Structural maintenance of chromosomes protein 25.6e-3975Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        M++K I LEGFKSYA RT V GFDP FNAITGLNGSGKSNIL SICF+LGI+NL QVRA+NLQ+LVYK G+AGITKA+VS+ FDNS++ +SPLG E H E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

Q9C5Y4 Structural maintenance of chromosomes protein 2-14.5e-4991.35Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT V GFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA NLQELVYKQG+AGITKATVSV FDNSERHRSPLG E+H E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

Q9SN90 Structural maintenance of chromosomes protein 2-22.7e-4991.35Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA NLQELVYKQG+AGIT+ATVSV FDNSER+RSPLG EDH E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

Arabidopsis top hitse value%identityAlignment
AT2G27170.1 Structural maintenance of chromosomes (SMC) family protein4.5e-1238.14Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCED
        M IK++ +EGFKSY  + A   F    N + G NGSGKSN  ++I FVL     Q +R+ +   L+++     +  A V +VFDNS+ +R P+  E+
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCED

AT2G27170.2 Structural maintenance of chromosomes (SMC) family protein4.5e-1238.14Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCED
        M IK++ +EGFKSY  + A   F    N + G NGSGKSN  ++I FVL     Q +R+ +   L+++     +  A V +VFDNS+ +R P+  E+
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCED

AT3G47460.1 Structural maintenance of chromosomes (SMC) family protein1.9e-5091.35Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT VPGFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA NLQELVYKQG+AGIT+ATVSV FDNSER+RSPLG EDH E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT

AT5G48600.1 structural maintenance of chromosome 31.2e-0937.65Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQ-GKAGITKATVSVVFD
        ++IKE+ +  FKSYA    V  F   F+A+ G NGSGKSN++ ++ FV G    +Q+R   + EL++       +  A VSV F+
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQ-GKAGITKATVSVVFD

AT5G62410.1 structural maintenance of chromosomes 23.2e-5091.35Show/hide
Query:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE
        MHIKEICLEGFKSYATRT V GFDPHFNAITGLNGSGKSNIL SICFVLGITNLQQVRA NLQELVYKQG+AGITKATVSV FDNSERHRSPLG E+H E
Subjt:  MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQE

Query:  ITVT
        ITVT
Subjt:  ITVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATCAAGGAAATTTGTCTGGAGGGGTTCAAGTCCTACGCGACGAGGACCGCTGTCCCGGGTTTCGATCCTCATTTCAATGCAATTACTGGGCTTAACGGTTCTGG
AAAGTCCAACATTCTGTATTCGATTTGCTTTGTTCTGGGAATTACTAATTTGCAGCAGGTTCGCGCTACGAATCTTCAGGAGCTTGTGTACAAGCAGGGAAAAGCAGGGA
TTACGAAGGCTACCGTGTCGGTTGTGTTCGATAATTCTGAGCGGCATCGGAGTCCGCTTGGGTGCGAGGATCATCAGGAGATTACTGTGACGTGA
mRNA sequenceShow/hide mRNA sequence
GAAGAACAGAGCAATTTTCCCGCCTTTGAGTTCTCTTCTCTTCTCTTCTGTTGGAGAGATCAAAAGCTTCATCAAATAATTTTCCTTCAAAATTTTCCCAGAAAAAAAAC
TCTCTGAAAATGCAGATTTCTAGGGTTTCGATCTCCGAATCCGATTCAATTTCGTCTATACAACTCCTCTGTTAGGGATTTCTCTTTTGAATTTCAGGGAAATTTTTAGT
TCTGAGGTTTCAAGTATCTGGGAGCGATGCACATCAAGGAAATTTGTCTGGAGGGGTTCAAGTCCTACGCGACGAGGACCGCTGTCCCGGGTTTCGATCCTCATTTCAAT
GCAATTACTGGGCTTAACGGTTCTGGAAAGTCCAACATTCTGTATTCGATTTGCTTTGTTCTGGGAATTACTAATTTGCAGCAGGTTCGCGCTACGAATCTTCAGGAGCT
TGTGTACAAGCAGGGAAAAGCAGGGATTACGAAGGCTACCGTGTCGGTTGTGTTCGATAATTCTGAGCGGCATCGGAGTCCGCTTGGGTGCGAGGATCATCAGGAGATTA
CTGTGACGTGACAGCCTTGAGAAAAGGGTGAACAAGAAAGTCATGGCCATGTTTGAGAAAGCAGAGGATGAGTACAATGATTTGATGTCAAAGAAAAACATCATCGAGGT
TAGTTTTGTTAAGTATGCTTGCATTTTACTAACTGAACTCTCTTTTCTAGAACGATAAGTCTAAAATAAAGAAGGTGATCGACGAATTAGATGAGAAACACTGAAAGTTA
CTTGGGTGAAAGTAAACGGTGACTTTGGTTCCATCTTTTCTACATTACTACCTGGGACTACGGCTAAGCTACAGCCTCCGGAAGGTTGTAGCTTCTTAGACGGTCTCGAA
GTACGAGTAGCGTTTGGTGGTGTTTGGAAGCAGTCATTATCAGAATTAAGTGAGGTCAACGATCTTTGTTGGCACTTTCTCTAATTTTAGCATTGCTTCTCTTCAAACCA
GCTCCCCTTTATATATTGGATGAGGTTGATGCAGCTCTTGATTTAAGTCACACACAGAACATTGGGAGGATGATCAAAGCTCACTTCCCACATTCCCAGATGGAAGTTTG
AAGCTATGGGCTTAGATTTCTG
Protein sequenceShow/hide protein sequence
MHIKEICLEGFKSYATRTAVPGFDPHFNAITGLNGSGKSNILYSICFVLGITNLQQVRATNLQELVYKQGKAGITKATVSVVFDNSERHRSPLGCEDHQEITVT