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Sed0012792 (gene) of Chayote v1 genome

Gene IDSed0012792
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:3623809..3625695
RNA-Seq ExpressionSed0012792
SyntenySed0012792
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150791.1 uncharacterized protein LOC111018854 [Momordica charantia]3.5e-3878.85Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKV-VSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAF
        MA+F+S+SFSVPQ +LKEM P+KL KV VSSRAITGTASKLVLSCC  KS+SM W + HPLRVTSRPF G+VSFSSRN VI GYW+GPDVDDGWGYIEAF
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKV-VSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAF

Query:  VDRI
        +DRI
Subjt:  VDRI

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]1.9e-3678.64Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV
        MASF+SLSFSVPQ I KEMPP KLAKV       GTASK VLSCC  KSIS NW NCHP+R+TSRPF GIVS SSRN+V+AGYWVGPDVDDGWGYIEAFV
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV

Query:  DRI
        DRI
Subjt:  DRI

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]2.5e-3677.67Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV
        MASF+SLSFSVPQ I KEMPP KLAKV       GTASK VLSCC  KSISMNW NC P+R+TSRPF GIVS SSRN+V+AGYWVGPDVDDGWGYIEA V
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV

Query:  DRI
        DRI
Subjt:  DRI

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-3778.64Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV
        MASF+SLSFSVPQ I KEMPP KLAKV       GTAS  VLSCC  KSISMNW NCHP+R+TSRPF GIVS SSRN+V+AGYWVGPDVDDGWGYIEAFV
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV

Query:  DRI
        DRI
Subjt:  DRI

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]4.7e-3576.42Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE
        MA+F+SLSFSVPQP LKE+PP+KL++  VVSSRA  GTASKLVLSCC   SISMNW NCHP+R+T RPF GIVS SSR MV ++GYWVGPDVDDGWGYIE
Subjt:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE

Query:  AFVDRI
        AF+DRI
Subjt:  AFVDRI

TrEMBL top hitse value%identityAlignment
A0A5A7U1B8 Uncharacterized protein8.9e-3275.47Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE
        MASF+SLSFSVPQ  LKE+PP KLAK  VVS RA  GTASKLVL C   KSISMNW N   +R+TSRPF GIVS SSRNMV + GYWVGPDVDDGWGYIE
Subjt:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE

Query:  AFVDRI
        AF+DRI
Subjt:  AFVDRI

A0A5D3CPK7 Uncharacterized protein4.4e-3174.53Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE
        MASF+SLSFSVPQ  LKE+PP KLAK  VVS RA  GTA KLVL C   KSISMNW N   +R+TSRPF GIVS SSRNMV + GYWVGPDVDDGWGYIE
Subjt:  MASFISLSFSVPQPILKEMPPQKLAK--VVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMV-IAGYWVGPDVDDGWGYIE

Query:  AFVDRI
        AF+DRI
Subjt:  AFVDRI

A0A6J1DCK5 uncharacterized protein LOC1110188541.7e-3878.85Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKV-VSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAF
        MA+F+S+SFSVPQ +LKEM P+KL KV VSSRAITGTASKLVLSCC  KS+SM W + HPLRVTSRPF G+VSFSSRN VI GYW+GPDVDDGWGYIEAF
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKV-VSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAF

Query:  VDRI
        +DRI
Subjt:  VDRI

A0A6J1G3X3 uncharacterized protein LOC1114505629.2e-3778.64Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV
        MASF+SLSFSVPQ I KEMPP KLAKV       GTASK VLSCC  KSIS NW NCHP+R+TSRPF GIVS SSRN+V+AGYWVGPDVDDGWGYIEAFV
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV

Query:  DRI
        DRI
Subjt:  DRI

A0A6J1K9Q0 uncharacterized protein LOC1114935481.2e-3677.67Show/hide
Query:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV
        MASF+SLSFSVPQ I KEMPP KLAKV       GTASK VLSCC  KSISMNW NC P+R+TSRPF GIVS SSRN+V+AGYWVGPDVDDGWGYIEA V
Subjt:  MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFV

Query:  DRI
        DRI
Subjt:  DRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCATTTCTCTCAGCTTCTCCGTTCCACAGCCCATTCTCAAGGAAATGCCACCACAAAAACTTGCCAAAGTTGTTTCAAGCCGGGCAATTACTGGAACAGC
TTCGAAGCTTGTGCTATCCTGTTGCTTAATTAAATCAATATCTATGAATTGGGTCAACTGTCATCCTTTACGGGTAACATCAAGACCTTTTTTAGGAATAGTTTCTTTTA
GTTCCAGGAATATGGTAATAGCTGGTTATTGGGTAGGACCCGATGTCGATGACGGTTGGGGATATATAGAAGCTTTTGTTGATCGGATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCTCTCCTCGCCCTTTTTTTGAAAAGCTAAACCCAAAACTTGGGGTTTTAGAATTCGCAGTTGCTTTCATGGCGAGCTTCATTTCTCTCAGCTTCTCCGTTCCACAG
CCCATTCTCAAGGAAATGCCACCACAAAAACTTGCCAAAGTTGTTTCAAGCCGGGCAATTACTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTGCTTAATTAAATCAAT
ATCTATGAATTGGGTCAACTGTCATCCTTTACGGGTAACATCAAGACCTTTTTTAGGAATAGTTTCTTTTAGTTCCAGGAATATGGTAATAGCTGGTTATTGGGTAGGAC
CCGATGTCGATGACGGTTGGGGATATATAGAAGCTTTTGTTGATCGGATTTTGTAACGATTCAAACTTTTAATTTGATTTTGTTTCTGCTTACTATGCTTGATCTTTTTC
AAATGCTTGTACAGCAGTCACTTGCTTTCACCAAAAGGTTCAAAAACTGATTCCCGTTT
Protein sequenceShow/hide protein sequence
MASFISLSFSVPQPILKEMPPQKLAKVVSSRAITGTASKLVLSCCLIKSISMNWVNCHPLRVTSRPFLGIVSFSSRNMVIAGYWVGPDVDDGWGYIEAFVDRIL