; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012801 (gene) of Chayote v1 genome

Gene IDSed0012801
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L35
Genome locationLG07:40179425..40182024
RNA-Seq ExpressionSed0012801
SyntenySed0012801
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]7.2e-5195.12Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_023549703.1 60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]3.2e-5195.93Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRR+LTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A0A0KQT2 Uncharacterized protein7.8e-5195.12Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L353.5e-5195.12Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1E5L3 60S ribosomal protein L35-like3.5e-5195.93Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SL TER+KKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L352.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L352.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-21.8e-4988.62Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV+SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-47.0e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV+SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-31.6e-4887.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L352.8e-5089.43Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTV+SQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-13.1e-4988.62Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein1.3e-5088.62Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV+SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein2.2e-5088.62Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein1.1e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein1.1e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein5.0e-5087.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV+SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAATTAAGGTTCATGAGCTGAGACAGAAGTCGAAGGCGGATCTTTTGACCCAACTTAAGGACCTTAAGGCCGAGCTTTCTCTCCTCCGCGTCGCTAAGGTCAC
TGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTAGTGAAGTTGTCAATTGCTCGGGTGTTGACAGTGGTTTCTCAGAAACAGAAGGCTGCTCTTAGGGAGGCCTACA
AGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCTAAGAAAACTAGGGCTATTCGTAGAAGGCTCACCAAGCACCAAGCATCTCTAAAGACCGAGCGGGAGAAAAAGAAA
GAGATGTACTACCCGTTGAGGAAGTATGCCATAAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
GGTTTTGCAGGTTGCAGAGCTCAGCCGAATCTCTAACGCACAACCGAGGCCAGATTCTAATGGCGAGAATTAAGGTTCATGAGCTGAGACAGAAGTCGAAGGCGGATCTT
TTGACCCAACTTAAGGACCTTAAGGCCGAGCTTTCTCTCCTCCGCGTCGCTAAGGTCACTGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTAGTGAAGTTGTCAAT
TGCTCGGGTGTTGACAGTGGTTTCTCAGAAACAGAAGGCTGCTCTTAGGGAGGCCTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCTAAGAAAACTAGGGCTA
TTCGTAGAAGGCTCACCAAGCACCAAGCATCTCTAAAGACCGAGCGGGAGAAAAAGAAAGAGATGTACTACCCGTTGAGGAAGTATGCCATAAAGGTGTAGGCGTAGAGC
GAATTGGTTGATCATCCTTGGTATCATCATGCACCTCTTACTCATTTTGTCTTTTGATTCATCTTTAACGTTATTGTTCAGATTTGAGTGACTATTTTGTTAGATCCATG
AACTTCTTCTTGAAAGTCTGCTTTTTCATGTATTACTTTAGCGTTTCTAAAGTTATAATGAAATGGCTTTGGTTAATGGCTTTAGGTAGAACGATATTTTTTTGGCAAGA
TGAATGTGATCTAATCTCAAAACACACGTGTTATGTTTGTGCTATATGCATTTTTATTTATATATCCGAGAGTGTTTTTTTTTTCTTTTGAAA
Protein sequenceShow/hide protein sequence
MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVVSQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKK
EMYYPLRKYAIKV