; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012804 (gene) of Chayote v1 genome

Gene IDSed0012804
OrganismSechium edule (Chayote v1)
Descriptionexosome complex component RRP43
Genome locationLG14:1712167..1731197
RNA-Seq ExpressionSed0012804
SyntenySed0012804
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-15695.08Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAA+KMEVMTPSIESPDEGCIAVDFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKE VNKE+RKLKLN +PFSLTCLLHK YILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDCVALTRQRSKELQMIL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]5.4e-15693.77Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSS+MEVDA+RRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAA+KMEVMTPS+ESPDEGCIA+DFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKEPVNKEKRKLKLN +PFSLTCLLHKKYILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDC+ALTRQRSKELQ+IL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

XP_008460773.1 PREDICTED: exosome complex component RRP43 isoform X2 [Cucumis melo]5.4e-15693.77Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSS+MEVDA+RRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAA+KMEVMTPS+ESPDEGCIA+DFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKEPVNKEKRKLKLN +PFSLTCLLHKKYILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDC+ALTRQRSKELQ+IL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]7.0e-15695.08Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAA+KMEVMTPSIESPDEGCIAVDFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKE VNKEKRKLKLN +PFSLTCLLHK YILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDCVALTRQRSKELQMIL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]1.9e-15695.41Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAA+KMEVMTPSIESPDEGCIAVDFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKE VNKEKRKLKLN +PFSLTCLLHK YILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDCVALTRQRSKELQMIL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X12.6e-15693.77Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSS+MEVDA+RRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAA+KMEVMTPS+ESPDEGCIA+DFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKEPVNKEKRKLKLN +PFSLTCLLHKKYILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDC+ALTRQRSKELQ+IL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

A0A1S3CEE1 exosome complex component RRP43 isoform X22.6e-15693.77Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSS+MEVDA+RRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAA+KMEVMTPS+ESPDEGCIA+DFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKEPVNKEKRKLKLN +PFSLTCLLHKKYILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDC+ALTRQRSKELQ+IL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

A0A6J1DFM7 exosome complex component RRP432.7e-15393.11Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAA+KMEVMTPSIESPDEGCIA+DFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKEPVNKEKRKLKL+ IPFSLTC+LHK +ILADPT EEESIMETIVTVVLD SGQLVSFYKPGGSVLA++SAVQDCVALTRQR KELQ+IL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

A0A6J1ESF5 exosome complex component RRP433.4e-15695.08Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAA+KMEVMTPSIESPDEGCIAVDFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKE VNKEKRKLKLN +PFSLTCLLHK YILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDCVALTRQRSKELQMIL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

A0A6J1HVL5 exosome complex component RRP432.2e-15594.75Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MGLPN A SGDLSSEMEVDA+RRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAA+KMEVMTPSIESPDEGCIAVDFH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MP ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+G
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS
        GENFEKE VNKEKRKLKLN +PFSLTCLLHK YILADPT EEES+METIVTVVLDSSGQLVSFYKPGGSVLAY+SAVQDCVALTRQRSKELQMIL+EAIS
Subjt:  GENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAIS

Query:  GMDID
        GM+ID
Subjt:  GMDID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp435.1e-3229.96Show/hide
Query:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        ++++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  +K E+  P   SP+EG I  +  + P+CS   +PG P++ A V
Subjt:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V  +             +   R ++L+ 
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQR
           S +  +    +LADPT EEE +    +T++L+SS  +V   K GG+ +     ++ C+ + R +
Subjt:  IPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQR

Q2KHU3 Exosome complex component RRP433.7e-4333.22Show/hide
Query:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        ++ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  +K E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM
         P + +  +     ++ DPT EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ +++E    M
Subjt:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM

Q8TYC2 Exosome complex component Rrp421.7e-3233.33Show/hide
Query:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  VK+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T     +Y+L DP
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADP

Query:  TTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAY-SSAVQDCVALTRQRSKELQ
          EEE IM+T +TV +  SG++ +  K  G +  +    ++D + L  ++++E++
Subjt:  TTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAY-SSAVQDCVALTRQRSKELQ

Q96B26 Exosome complex component RRP436.2e-4634.63Show/hide
Query:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        ++ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  VK E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM
         P + +  +     ++ DPT EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ +++E I  M
Subjt:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM

Q9D753 Exosome complex component RRP431.4e-4534.98Show/hide
Query:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        ++ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  VK E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  YRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM
         P + +  +     ++ DPT EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +L+E I  M
Subjt:  IPFSLT-CLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein2.0e-12474.35Show/hide
Query:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH
        MG+P+ A   DLS+EMEVDA+RR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAA++MEVMTPS +SPDEGCIA++FH
Subjt:  MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V+ E+ 
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GEN---FEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEE
         +N    EKE VNKEKRKL L  IPFSLTC+LHK YILADPTTEEESIM+T+VTVVLDSS Q+VSFYK GG+ LAYSSA++ CV L R+R+KEL+ IL E
Subjt:  GEN---FEKEPVNKEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEE

Query:  AISGMDID
            MDID
Subjt:  AISGMDID

AT3G07750.1 3'-5'-exoribonuclease family protein4.6e-2028.57Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A+VK E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF

Query:  SLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGMD
         +T      + + D T EEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   L+  IS  +
Subjt:  SLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGMD

AT3G07750.2 3'-5'-exoribonuclease family protein4.6e-2028.57Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A+VK E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF

Query:  SLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGMD
         +T      + + D T EEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   L+  IS  +
Subjt:  SLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATACTGCTGATTCTGGAGACTTGTCGTCGGAAATGGAGGTCGATGCTTATCGGCGCCTCTTTCCGATTCAGTTTTTCGAGCGCCACCTCGCT
GAATCGATACGCCCTGATGGAAGGGCACTGGGAAAGGCTAGAGATACAACCATTGCTCTTGGACCGGTATCGTCTGCGAACGGGTCTGCCCTGGCTAAGATTGGT
TCTACCACAATGTTGGCTGCTGTTAAAATGGAAGTGATGACGCCTTCGATAGAGTCGCCCGACGAGGGTTGCATAGCTGTTGATTTCCATATGCCTCCGATTTGC
TCTCCCATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAATTA
TCTCTTGTCAAAGGAAAAGCTGCTTGGATGGCATACCTGGATATTTATTGCTTGGATGCAGACGGATCTCTTTTTGATGCTGCACTTCTTTCTGCAGCTGCTGCA
TTTTCTCACTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTGTTTGTCTCTGAAGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAAC
AAAGAGAAAAGGAAACTTAAATTGAACTGTATTCCTTTTTCATTAACATGCTTACTCCACAAGAAGTATATCTTGGCCGACCCTACCACAGAGGAAGAGTCCATC
ATGGAAACTATTGTAACCGTGGTTTTGGATTCATCTGGTCAATTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCATATTCATCAGCTGTTCAGGATTGT
GTAGCATTGACGAGACAAAGATCGAAAGAACTGCAGATGATTTTAGAGGAAGCTATTTCTGGTATGGACATTGACTAA
mRNA sequenceShow/hide mRNA sequence
CACAGATATTCTCCTTCAAACTCAGACTCGTTCGCTTCCTCAAGTTTCACCTCCTCCACGGCCGCCGCATTTATCTCCTTCGAAATCGCCGCCGCCGACCGCCAC
AACTGAACCCCGCCGCCGGGACTTTGACCGGAGCAACGATAAACAAAAGGACTGCAGAATTTATACACACATCGGAGCGTGAGGGATAAAGAGTACGAACAATGG
GACTGCCAAATACTGCTGATTCTGGAGACTTGTCGTCGGAAATGGAGGTCGATGCTTATCGGCGCCTCTTTCCGATTCAGTTTTTCGAGCGCCACCTCGCTGAAT
CGATACGCCCTGATGGAAGGGCACTGGGAAAGGCTAGAGATACAACCATTGCTCTTGGACCGGTATCGTCTGCGAACGGGTCTGCCCTGGCTAAGATTGGTTCTA
CCACAATGTTGGCTGCTGTTAAAATGGAAGTGATGACGCCTTCGATAGAGTCGCCCGACGAGGGTTGCATAGCTGTTGATTTCCATATGCCTCCGATTTGCTCTC
CCATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAATTATCTC
TTGTCAAAGGAAAAGCTGCTTGGATGGCATACCTGGATATTTATTGCTTGGATGCAGACGGATCTCTTTTTGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTT
CTCACTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTGTTTGTCTCTGAAGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAG
AGAAAAGGAAACTTAAATTGAACTGTATTCCTTTTTCATTAACATGCTTACTCCACAAGAAGTATATCTTGGCCGACCCTACCACAGAGGAAGAGTCCATCATGG
AAACTATTGTAACCGTGGTTTTGGATTCATCTGGTCAATTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCATATTCATCAGCTGTTCAGGATTGTGTAG
CATTGACGAGACAAAGATCGAAAGAACTGCAGATGATTTTAGAGGAAGCTATTTCTGGTATGGACATTGACTAAGTTGGGAATCTTTCCTCCTAATTTTATTGAA
TGGAATGGTGGATGTTTTGGTTTCCTCCAAATTTTGGTGATGATATTTGTTAAAACCCTGTAGTTGTTTTTCTTAGGATTTTTGATGCAGGGGTTTGATTTTTGT
GACAGTTCTAAATCAAATCTCTCT
Protein sequenceShow/hide protein sequence
MGLPNTADSGDLSSEMEVDAYRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAVKMEVMTPSIESPDEGCIAVDFHMPPIC
SPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVN
KEKRKLKLNCIPFSLTCLLHKKYILADPTTEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYSSAVQDCVALTRQRSKELQMILEEAISGMDID