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Sed0012805 (gene) of Chayote v1 genome

Gene IDSed0012805
OrganismSechium edule (Chayote v1)
DescriptionDOG1 domain-containing protein
Genome locationLG06:14046728..14047305
RNA-Seq ExpressionSed0012805
SyntenySed0012805
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583955.1 Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1050Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKT+K I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
XP_022927420.1 protein DOG1-like 4 [Cucurbita moschata]1.8e-1050Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKT+K I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
XP_023000975.1 protein DOG1-like 4 [Cucurbita maxima]7.9e-1151.06Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKTLK I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
XP_023520035.1 protein DOG1-like 4 [Cucurbita pepo subsp. pepo]1.8e-1050Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKT+K I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
XP_034213840.1 protein DOG1-like 4 [Prunus dulcis]3.8e-0539.13Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V  ++ER Q+A+A   ++    LE+  +NG  +V  E++G VDVA+           KA++ +RLKTLK + +VL+P QCV FLA+  ++QI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
TrEMBL top hitse value%identityAlignment
A0A5E4G1Z0 PREDICTED: mRNAion factor1.8e-0539.13Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V  ++ER Q+A+A   ++    LE+  +NG  +V  E++G VDVA+           KA++ +RLKTLK + +VL+P QCV FLA+  ++QI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
A0A6J1ENV7 protein DOG1-like 48.5e-1150Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKT+K I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
A0A6J1KJS8 protein DOG1-like 43.8e-1151.06Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V+ D+ER QMA+A HH++    LET  +NGD +  V+ +++G VD AI           KA++ +RLKTLK I EVLTP QCV FLAS SLIQI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTL--VLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
A0A6P3Z9A9 protein DOG1-like 42.4e-0541.3Show/hide
Query:  VNTDIERLQMAIASHHILHLE---THHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V +++ER QMAIA   ++ L    T  +NG+T    +++G V+VAI           KA + +RLKTLK + E+L P QCV FLA+ S++QI
Subjt:  VNTDIERLQMAIASHHILHLE---THHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
A0A6P5SDG1 protein DOG1-like 43.1e-0538.04Show/hide
Query:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
        V  ++ER Q+A+A   ++    L +  +NG  +V+ E++G VDVA+           KA++ +RLKTLK + +VL+P QCV FLA+  ++QI
Subjt:  VNTDIERLQMAIASHHIL---HLETHHKNGDTLVLPELDGQVDVAI-----------KASNYMRLKTLKDIFEVLTPFQCVCFLASFSLIQI
SwissProt top hitse value%identityAlignment
Q84JC2 Protein DOG1-like 45.1e-0530.19Show/hide
Query:  LEIPISRFESHHNVLAFFSTLVNTDIERLQMAIASHHILHLET--HHKNGDTLVLPE-----LDGQVDVAIKASNYMRLKTLKDIFEVLTPFQCVCFLAS
        +E  + + E       F    +  ++ER Q+A+A   ++ L     H  G+++++ E     L   ++  +KA++ +RLKTLK I ++LTP QCV FLA+
Subjt:  LEIPISRFESHHNVLAFFSTLVNTDIERLQMAIASHHILHLET--HHKNGDTLVLPE-----LDGQVDVAIKASNYMRLKTLKDIFEVLTPFQCVCFLAS

Query:  FSLIQI
         +  Q+
Subjt:  FSLIQI
Arabidopsis top hitse value%identityAlignment
AT4G18650.1 transcription factor-related3.7e-0630.19Show/hide
Query:  LEIPISRFESHHNVLAFFSTLVNTDIERLQMAIASHHILHLET--HHKNGDTLVLPE-----LDGQVDVAIKASNYMRLKTLKDIFEVLTPFQCVCFLAS
        +E  + + E       F    +  ++ER Q+A+A   ++ L     H  G+++++ E     L   ++  +KA++ +RLKTLK I ++LTP QCV FLA+
Subjt:  LEIPISRFESHHNVLAFFSTLVNTDIERLQMAIASHHILHLET--HHKNGDTLVLPE-----LDGQVDVAIKASNYMRLKTLKDIFEVLTPFQCVCFLAS

Query:  FSLIQI
         +  Q+
Subjt:  FSLIQI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATGTACTCTATTGCACGAGCATGCATCCCAACAACAATTTAGTATTTTTCAAGCTAGAAATCCCCATATCCAGGTTTGAATCCCATCACAACGTCCTCGCCTT
CTTTTCCACTCTAGTCAATACCGACATTGAGAGGCTGCAAATGGCCATCGCCAGCCACCACATCCTCCACCTTGAGACGCACCACAAAAATGGTGACACGCTCGTTCTTC
CCGAGCTTGATGGTCAGGTGGATGTTGCCATCAAAGCATCTAACTATATGAGGCTGAAGACGTTGAAAGATATTTTTGAAGTGCTCACGCCGTTTCAATGCGTTTGTTTC
TTGGCTTCCTTTTCTCTCATTCAGATTTGTTATAATTATGTATATATGTATTTTTATTTATCGCTTTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATGTACTCTATTGCACGAGCATGCATCCCAACAACAATTTAGTATTTTTCAAGCTAGAAATCCCCATATCCAGGTTTGAATCCCATCACAACGTCCTCGCCTT
CTTTTCCACTCTAGTCAATACCGACATTGAGAGGCTGCAAATGGCCATCGCCAGCCACCACATCCTCCACCTTGAGACGCACCACAAAAATGGTGACACGCTCGTTCTTC
CCGAGCTTGATGGTCAGGTGGATGTTGCCATCAAAGCATCTAACTATATGAGGCTGAAGACGTTGAAAGATATTTTTGAAGTGCTCACGCCGTTTCAATGCGTTTGTTTC
TTGGCTTCCTTTTCTCTCATTCAGATTTGTTATAATTATGTATATATGTATTTTTATTTATCGCTTTCGTAG
Protein sequenceShow/hide protein sequence
MRHVLYCTSMHPNNNLVFFKLEIPISRFESHHNVLAFFSTLVNTDIERLQMAIASHHILHLETHHKNGDTLVLPELDGQVDVAIKASNYMRLKTLKDIFEVLTPFQCVCF
LASFSLIQICYNYVYMYFYLSLS