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Sed0012841 (gene) of Chayote v1 genome

Gene IDSed0012841
OrganismSechium edule (Chayote v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationLG13:316394..318654
RNA-Seq ExpressionSed0012841
SyntenySed0012841
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]9.3e-4187.88Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        MAP  SVASDG PKWEFSCD EVDYESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLR+S+SAF+DVLTLATKTIEDFGQG+ F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]1.6e-4089.69Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGM
        MAP ASVASDG  KWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLR+S+SAF+DVLTLATKTIEDFGQG+
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGM

XP_022945934.1 uncharacterized protein LOC111450028 [Cucurbita moschata]5.4e-4189.9Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        MAP ASV SDG  KWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLR+SYSAF+DVLTLA KTIEDFGQG+ F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]5.4e-4187.88Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        M P  SVASDG P WEFSCDFEVDYESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+HFEAVEARFLR+S+SAF+DVLTLATKTIEDFGQG+ F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]4.6e-4085.86Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        MAP ASVASDG  KWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M+VSDGKLS+HFEAVEARFLR+S+SAF+DVLTLATKT+EDFGQ + F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein1.6e-3884.85Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        M P ASVAS G PKWEFSCDFEVDYESEKKASIVY ALVVDKELQPDKVKR M+ SDGKLS+HFEAVEARFLR+S+SAF+DVLTLATKTIEDFGQ   F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

A0A1S3CTG0 uncharacterized protein LOC1035041462.1e-3881.82Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        M P ASVASDG  KWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLR+S+S+F+DVLTLATKTIEDFG  + F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

A0A6J1CHJ5 uncharacterized protein LOC1110115647.7e-4189.69Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGM
        MAP ASVASDG  KWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLR+S+SAF+DVLTLATKTIEDFGQG+
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGM

A0A6J1G2C3 uncharacterized protein LOC1114500282.6e-4189.9Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        MAP ASV SDG  KWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLR+SYSAF+DVLTLA KTIEDFGQG+ F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

A0A6J1HX84 uncharacterized protein LOC111467483 isoform X21.9e-3987.88Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF
        MAP ASV SDG  KWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKR MTVSDGKLSVHFEAVEARFLR+S SAF+DVLTLA KTIEDFGQG+ F
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein5.6e-2860Show/hide
Query:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQ
        MA      +     W+FSC+ +V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLSVHFEA+EAR LR+S+SAF+DVLTLAT+TI++FGQ
Subjt:  MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGATTGCTTCCGTCGCTTCTGATGGCGGGCCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGACTACGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTTGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTTGAGGCAGTGGAAGCAAGGTTTCTGCGTT
CATCATACAGTGCTTTTATAGATGTACTTACTCTTGCCACAAAGACAATTGAAGATTTTGGACAAGGAATGCATTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATGGCGAACTTGTTATATTAGGTTATTTGAGTTAAAAATCTGACCTTTTTGCGCTAAAATTTTGAAGCAATGGCTCCGATTGCTTCCGTCGCTTCTGATGGCGGG
CCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGACTACGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTTGATAAAGAGTTGCAGCCAGACAAGGT
GAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTTGAGGCAGTGGAAGCAAGGTTTCTGCGTTCATCATACAGTGCTTTTATAGATGTACTTACTCTTG
CCACAAAGACAATTGAAGATTTTGGACAAGGAATGCATTTCTGATACTGATCGACTCACATGCTCCTCAAAGATGAAGTGTCATTTTTTTAATAATTAAAGTAGCTGTGA
TTGTGATTTACATCTGATCTGTAATTTTATTACAATATGATTTGTAGTGGTTTGATATGAATATGAAGGTCTTCAGTCTCGAAATTCTTGGATCTAAAGGAAGTAATATT
GGCAATTTTCTTATGTACGG
Protein sequenceShow/hide protein sequence
MAPIASVASDGGPKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRSSYSAFIDVLTLATKTIEDFGQGMHF