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Sed0012842 (gene) of Chayote v1 genome

Gene IDSed0012842
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:34084622..34085036
RNA-Seq ExpressionSed0012842
SyntenySed0012842
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]5.5e-3070.97Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KKS SSFSIFS FKS++ RKGD+CNH  SC DE+PRS KVWPSDEDKAH WVAEPGIDR+A+DYID++YRNRV E+E QT+T  PN T+S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2872.41Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPN
        +SKK+ SSFSIF+ FKSKK RK DHC+H S  DE+PRS KVWPSDEDK HRWVAEPGIDR+A+DYID++YRNRV E+E QTVT   N
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPN
KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2765.56Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTE
        +SKK+ SSFSIF+ FKS++ RK DHC+H    DE+PRS K+WPSDEDK HRWVAEPGIDR+A+DYID++YRNRV E+E QTVT   + T+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTE
KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]1.6e-2969.89Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KK+ +SFSIFS FKS++ RKGDHCNH  SC DE+PRS KVWPSDEDKAH WVAEPGIDR+A+DYID++YRNRV E+E QTVT  PN  +S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]2.3e-2869.89Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KKS SSFSIFS FKSK+ RKGDH +HG +  DE+PRS KVWPSDEDKAH W+AEPGIDR+A+DYID++YRNRV E+E QTVT  PN T+S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.1e-2869.89Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KKS SSFSIFS FKSK+ RKGDH +HG +  DE+PRS KVWPSDEDKAH W+AEPGIDR+A+DYID++YRNRV E+E QTVT  PN T+S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
A0A0A0K8W0 Uncharacterized protein2.3e-2664.13Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KK+ SSFSIFS FKSK+ RKGD   HG++ +++P S KVWPSDEDK +RWVAEPGIDR+A+DYID++Y+NRV ETE QTVT +PN   S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
A0A0A0KAK6 Uncharacterized protein7.7e-3069.89Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KK+ +SFSIFS FKS++ RKGDHCNH  SC DE+PRS KVWPSDEDKAH WVAEPGIDR+A+DYID++YRNRV E+E QTVT  PN  +S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
A0A0A0KBW1 Uncharacterized protein1.5e-2869.89Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSS-CDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KKS SSFSIFS FKS++ RKGDH +HG +  DE+PRS KVWPSDEDKAH WVAEPGIDR+A+DYID++YRNRV E+E QTVT  PN T+S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSS-CDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
A0A5A7SWT9 Uncharacterized protein2.6e-3070.97Show/hide
Query:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
        + KKS SSFSIFS FKS++ RKGD+CNH  SC DE+PRS KVWPSDEDKAH WVAEPGIDR+A+DYID++YRNRV E+E QT+T  PN T+S+
Subjt:  QSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSC-DELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein5.7e-0943.18Show/hide
Query:  GQSKKSRSS--FSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFY
        G   +S SS  FS+FS FK+   R+        S D+   + K   SDEDK + WVAEPGIDR+A  +I K +  RV E+E QT++ Y
Subjt:  GQSKKSRSS--FSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFY
AT5G26620.1 unknown protein6.3e-0850.94Show/hide
Query:  SSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTV
        +S D++  + K W SDEDK + WVAEPGIDR+A  +I K + +RV E+E QT+
Subjt:  SSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCCAATCGAAAAAATCTCGCTCTTCCTTCTCAATATTTAGCCTTTTCAAGTCGAAAAAGGATAGAAAAGGAGATCATTGCAACCATGGTAGCTCTTGCGATGA
GTTACCGAGATCATGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCGTTGGGTTGCTGAACCTGGTATTGATAGAAGAGCTAGAGATTATATCGACAAGGTCTATC
GCAACCGTGTTTTAGAAACCGAAAGCCAGACTGTCACTTTTTATCCGAACAAAACCGAGTCATCAAATTAA
mRNA sequenceShow/hide mRNA sequence
CTCACACTTCAATTCATTTTTCCATCTGATTACTTCCTTTACACCATGAGAGGCCAATCGAAAAAATCTCGCTCTTCCTTCTCAATATTTAGCCTTTTCAAGTCGAAAAA
GGATAGAAAAGGAGATCATTGCAACCATGGTAGCTCTTGCGATGAGTTACCGAGATCATGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCGTTGGGTTGCTGAAC
CTGGTATTGATAGAAGAGCTAGAGATTATATCGACAAGGTCTATCGCAACCGTGTTTTAGAAACCGAAAGCCAGACTGTCACTTTTTATCCGAACAAAACCGAGTCATCA
AATTAAAAATAGAGGGATTTCAAGGATATTTACAACTTGATAACTTACAAGAATGTGACTTCGAGTGTTTCGTATCTATTCCAAT
Protein sequenceShow/hide protein sequence
MRGQSKKSRSSFSIFSLFKSKKDRKGDHCNHGSSCDELPRSCKVWPSDEDKAHRWVAEPGIDRRARDYIDKVYRNRVLETESQTVTFYPNKTESSN