; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012847 (gene) of Chayote v1 genome

Gene IDSed0012847
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:63279985..63280751
RNA-Seq ExpressionSed0012847
SyntenySed0012847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040112.1 hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa]9.3e-2676.54Show/hide
Query:  SSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        ++LIVLSVAH+SAD  Q IARFPD +TSHQLLYLLF FPLQ+LSR+ALSLW F CVPPPGSFYY+YYSSDSD+S Y  +SD
Subjt:  SSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

PON98040.1 hypothetical protein TorRG33x02_061140 [Trema orientale]3.7e-2269.05Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+SL+VLSVAHVSADAWQC+A FP+R++SHQLL L+F FPLQ+L R+AL LW FLC+PPP SFY + YSSDSD  D  S++D
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

XP_022153861.1 uncharacterized protein LOC111021275 [Momordica charantia]6.9e-2980.68Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVS----DYDSSSD
        MVFSSLIVLSVAH+SADA QCIA FPDR+TSHQLLYLLFGFPLQ+LSR+ALS W F CVPPPGSFYY+YYSSDSD S     Y SSSD
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVS----DYDSSSD

XP_022958637.1 uncharacterized protein LOC111459803 [Cucurbita moschata]8.4e-2777.38Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+SLIVLSVAH+SADA QCIAR PDR+TSHQLLY+LF +PLQ+LSR+ALS+W FLCVPPPGSFYY+YYS     SDYDSSS+
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

XP_030478483.1 uncharacterized protein LOC115695566 [Cannabis sativa]6.9e-2164.29Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+SL+V+SVAHVSADAWQC+A FP+R++S QLL L+F FPLQ+L R AL LW FLC+PPP SFY + YSSD D  D  ++ D
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

TrEMBL top hitse value%identityAlignment
A0A0A0L0B8 Uncharacterized protein3.5e-2679.49Show/hide
Query:  IVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        IVLSVAH+SADA Q IARFPD +TSHQLLYLLF FPLQ+LSR+ALSLW   CVPPPGSFYY+YYSSDSD+S YD +SD
Subjt:  IVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

A0A2P5FJR7 Uncharacterized protein1.8e-2269.05Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+SL+VLSVAHVSADAWQC+A FP+R++SHQLL L+F FPLQ+L R+AL LW FLC+PPP SFY + YSSDSD  D  S++D
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

A0A5A7T9K4 Uncharacterized protein4.5e-2676.54Show/hide
Query:  SSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        ++LIVLSVAH+SAD  Q IARFPD +TSHQLLYLLF FPLQ+LSR+ALSLW F CVPPPGSFYY+YYSSDSD+S Y  +SD
Subjt:  SSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

A0A6J1DKC2 uncharacterized protein LOC1110212753.3e-2980.68Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVS----DYDSSSD
        MVFSSLIVLSVAH+SADA QCIA FPDR+TSHQLLYLLFGFPLQ+LSR+ALS W F CVPPPGSFYY+YYSSDSD S     Y SSSD
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVS----DYDSSSD

A0A6J1H2D5 uncharacterized protein LOC1114598034.1e-2777.38Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+SLIVLSVAH+SADA QCIAR PDR+TSHQLLY+LF +PLQ+LSR+ALS+W FLCVPPPGSFYY+YYS     SDYDSSS+
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55365.1 unknown protein1.8e-1143.02Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFP--DRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD
        MVF+S +V++VA VS D WQ I R P   RI + QL  +   FP+ +LSR  L LW F+C+P   SFY + Y + S  S  ++  D
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFP--DRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD

AT5G56520.1 unknown protein2.0e-1045.88Show/hide
Query:  MVFSSLIVLSVAHVSADAWQCIARFP--DRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSS
        MVF    V+SVAH+SA+ +Q +   P  DRI+S ++L L+  FPLQ+L R  L  W ++CVPPP    YF    D D   Y SSS
Subjt:  MVFSSLIVLSVAHVSADAWQCIARFP--DRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTTAGCAGCTTAATCGTGCTGTCGGTCGCTCATGTATCGGCCGATGCTTGGCAGTGCATTGCGCGATTTCCCGATCGCATCACCAGCCACCAGCTTCTTTACCT
TCTCTTTGGTTTCCCTCTTCAACGCCTCTCTCGCATCGCTCTCTCTTTATGGGCGTTTTTGTGTGTTCCTCCCCCTGGTTCTTTCTACTACTTCTACTACTCCTCTGATT
CTGACGTCTCTGACTATGATTCTTCGTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
CGCTTTAGTTCTTCTTTCTCTTCCAACTTTTTCTCCCCTCCTCTTTTCTAACACCAAAATCCAATCAACCACCAACAATACTGACCCAGTTGACTCAAAAACTTACCCCA
AAAACCAAAATCAAAATCTCCGCTGTGGAGTTCATCTCTCAGATCTGTGGCGCCACAAAATCCAATCCAGGAAATCGAAGAACACAGACCCTAAATCGCGAATCAGGCAC
ACAATCTCGCCAATCGCGAAACCCCGCAGAGAAATTGAGATGGTGTTTAGCAGCTTAATCGTGCTGTCGGTCGCTCATGTATCGGCCGATGCTTGGCAGTGCATTGCGCG
ATTTCCCGATCGCATCACCAGCCACCAGCTTCTTTACCTTCTCTTTGGTTTCCCTCTTCAACGCCTCTCTCGCATCGCTCTCTCTTTATGGGCGTTTTTGTGTGTTCCTC
CCCCTGGTTCTTTCTACTACTTCTACTACTCCTCTGATTCTGACGTCTCTGACTATGATTCTTCGTCCGATTGATTGATTTCTCTGGTAATTTTCAACCCTTTTCTTTGA
TTGTCAGATTCTGGACTTTTTTTTTTTTTTGAGTACATATCGGGGGAGTGGGACAGATACCGATTCTCGGGCTTGAATATGCGGCGCTGGTGTTGAACTGGTTTACAACC
AAATAATGAAATCATTGATGACCCATTTGGATGACTATTTTATTTTTGAAATTCAAGCTTATAACAATTACTTTAGCATATATTTCATTACTTGGATATCTAGGTCG
Protein sequenceShow/hide protein sequence
MVFSSLIVLSVAHVSADAWQCIARFPDRITSHQLLYLLFGFPLQRLSRIALSLWAFLCVPPPGSFYYFYYSSDSDVSDYDSSSD