; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012850 (gene) of Chayote v1 genome

Gene IDSed0012850
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L26
Genome locationLG14:18273283..18274073
RNA-Seq ExpressionSed0012850
SyntenySed0012850
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8497438.1 hypothetical protein CXB51_008738 [Gossypium anomalum]6.3e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

TYG75459.1 hypothetical protein ES288_D03G033000v1 [Gossypium darwinii]6.3e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_002284455.1 PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]2.8e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYN RSMPIRKDDEVQ+VRGTFKGREGKVVQVYRRKWVIH+ERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_016720131.1 60S ribosomal protein L26-1 [Gossypium hirsutum]6.3e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_021688306.1 60S ribosomal protein L26-1 [Hevea brasiliensis]6.3e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFTAPSSVRR++MSAPLSTDLR KYNVRSMP+RKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A2P5RUI9 KOW domain-containing protein3.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A438KQ45 60S ribosomal protein L26-11.4e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYN RSMPIRKDDEVQ+VRGTFKGREGKVVQVYRRKWVIH+ERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A5B7AXG2 Putative 60S ribosomal protein L26-13.0e-7095.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAP+STDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQS+D
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A5D2RMH8 KOW domain-containing protein3.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQ+VRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A5AQ64 KOW domain-containing protein1.4e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSTDLRSKYN RSMPIRKDDEVQ+VRGTFKGREGKVVQVYRRKWVIH+ERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-18.0e-6890.41Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQIVRGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RKAKGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

P61254 60S ribosomal protein L262.8e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQ+VRG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI

P61257 60S ribosomal protein L262.8e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQ+VRG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L263.8e-6284.14Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR++RK HFTA SS RRV MS+PLSTDLR KYNVRSMPIRKDDE QIVRGT+KGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RKAKGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-27.5e-6686.3Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQ+VRGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RKA GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein5.7e-6990.41Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQIVRGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RKAKGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein5.3e-6786.3Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQ+VRGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RKA GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCGAGAGTCTCCTCTTCACGCCGGAAGAGCCGCAAGGCTCACTTCACGGCGCCGTCGAGCGTCCGCCGTGTTATCATGAGCGCGCCTCTCTCGACGGA
CCTCCGGTCCAAGTACAACGTCCGATCCATGCCAATTCGCAAGGACGATGAGGTCCAAATCGTCCGTGGAACCTTCAAGGGCCGTGAAGGCAAGGTCGTGCAGGTTTACC
GCCGAAAGTGGGTCATCCACATCGAGCGAATCACTCGCGAGAAGGTTAATGGATCCACCGTCAATGTCGGCATCAATCCTTCCAAGGTTGTGATTACCAAGCTCAGGCTG
GACAAGGACCGCAAGTCGCTTTTGGACCGGAAAGCTAAGGGCCGAGCCGCTGCTGATAAGGATAAAGGTACCAAGTTCACTGCTGAGGATATTATGCAGAGCGTTGATTA
G
mRNA sequenceShow/hide mRNA sequence
ATAATATATAAAGGCATGAAACCCTAGGTCATCTCCTCCAATCGCCCTCTTCAAACTCCCCTTCGTCTCTGCTCCCACTCTCACCGGCGGCCATGAAGTACAATCCGAGA
GTCTCCTCTTCACGCCGGAAGAGCCGCAAGGCTCACTTCACGGCGCCGTCGAGCGTCCGCCGTGTTATCATGAGCGCGCCTCTCTCGACGGACCTCCGGTCCAAGTACAA
CGTCCGATCCATGCCAATTCGCAAGGACGATGAGGTCCAAATCGTCCGTGGAACCTTCAAGGGCCGTGAAGGCAAGGTCGTGCAGGTTTACCGCCGAAAGTGGGTCATCC
ACATCGAGCGAATCACTCGCGAGAAGGTTAATGGATCCACCGTCAATGTCGGCATCAATCCTTCCAAGGTTGTGATTACCAAGCTCAGGCTGGACAAGGACCGCAAGTCG
CTTTTGGACCGGAAAGCTAAGGGCCGAGCCGCTGCTGATAAGGATAAAGGTACCAAGTTCACTGCTGAGGATATTATGCAGAGCGTTGATTAGTTTTGAGAATTATGGTG
TTTAAGTTGATGGAATTGTTATTCTCTTTCATAGTTGTTAAGCATGTTTTGTTTTCTGAGATATTAGGAAAACTTATCGGATATGTGGCTGCCCTTGATTTATGGTATTT
TATAATCACATTTTGTCATTCCAATCAGCTTGTCTTCTGATTTGATTATCATTATTGCTACATTGTTGAACTCTTGTTTGTTTGTTTGATTGATATTCCATAAAATTGAC
TAATTTAGGCTCGTTCGATAA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQIVRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL
DKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD