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Sed0012859 (gene) of Chayote v1 genome

Gene IDSed0012859
OrganismSechium edule (Chayote v1)
DescriptionDET1- and DDB1-associated protein 1
Genome locationLG01:67756108..67759448
RNA-Seq ExpressionSed0012859
SyntenySed0012859
Gene Ontology termsGO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143885.1 DET1- and DDB1-associated protein 1 isoform X1 [Cucumis sativus]1.2e-4595.92Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
XP_022157123.1 DET1- and DDB1-associated protein 1 isoform X1 [Momordica charantia]6.1e-4594.9Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHT EKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
XP_022958597.1 DET1- and DDB1-associated protein 1-like [Cucurbita moschata]1.2e-4392.86Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHTE+KSRTKRPA EHP PEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
XP_038906812.1 DET1- and DDB1-associated protein 1 isoform X1 [Benincasa hispida]9.5e-4695.92Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHPAPEHGSKQPRAS+ NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
XP_038906813.1 DET1- and DDB1-associated protein 1 isoform X2 [Benincasa hispida]1.2e-4394.9Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPS MIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHPAPEHGSKQPRAS+ NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
TrEMBL top hitse value%identityAlignment
A0A0A0KKG6 DET1- and DDB1-associated protein 16.0e-4695.92Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
A0A1S3ATF9 DET1- and DDB1-associated protein 17.3e-4494.9Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPS MIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
A0A1S3AUC0 DET1- and DDB1-associated protein 16.0e-4695.92Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
A0A6J1DSK3 DET1- and DDB1-associated protein 13.0e-4594.9Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHT EKSRTKRPA EHP PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
A0A6J1H293 DET1- and DDB1-associated protein 15.6e-4492.86Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNF+QLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHTE+KSRTKRPA EHP PEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN
SwissProt top hitse value%identityAlignment
Q9FFS4 DET1- and DDB1-associated protein 11.5e-3068.04Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTS
        M S+LGDLPS+DPHNF+Q RPSDPS PSKM+P TY PTH+RTLPPPDQVI TE KNILIR  YQ  EEK R KRPA +H A EH +K  RA+++++S
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTS
Arabidopsis top hitse value%identityAlignment
AT5G41560.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).1.1e-3168.04Show/hide
Query:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTS
        M S+LGDLPS+DPHNF+Q RPSDPS PSKM+P TY PTH+RTLPPPDQVI TE KNILIR  YQ  EEK R KRPA +H A EH +K  RA+++++S
Subjt:  MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTATGCTCGGTGACCTGCCGTCATACGACCCTCACAACTTCACCCAACTCCGACCCTCCGATCCTTCAACTCCCTCTAAGATGATTCCGGCCACCTATCATCC
TACCCACAGTAGGACCCTTCCTCCACCAGATCAGGTTATAAATACTGAGGCAAAAAATATACTTATACGCCACATTTATCAGCACACAGAAGAGAAGTCAAGAACAAAGA
GACCAGCACCTGAGCATCCAGCACCCGAGCACGGAAGCAAGCAACCAAGAGCATCTACTGCCAACACTTCAAATTGA
mRNA sequenceShow/hide mRNA sequence
AATTTTCGAGAAGTATTTAAACTAAATTACTCCATAGAAAGTGGGTATAAACCAATACACTGGACATCCACTGATTTGGAACAAAAAACCACAATTTCTTGAGCTGCATT
TTCATGGGGTCTATGCTCGGTGACCTGCCGTCATACGACCCTCACAACTTCACCCAACTCCGACCCTCCGATCCTTCAACTCCCTCTAAGATGATTCCGGCCACCTATCA
TCCTACCCACAGTAGGACCCTTCCTCCACCAGATCAGGTTATAAATACTGAGGCAAAAAATATACTTATACGCCACATTTATCAGCACACAGAAGAGAAGTCAAGAACAA
AGAGACCAGCACCTGAGCATCCAGCACCCGAGCACGGAAGCAAGCAACCAAGAGCATCTACTGCCAACACTTCAAATTGAGCTTGGAGGACATTTTTCTTCCAACAATGT
AAAATCTGTTCTATGTTTTGAAAAGATGTGTCCTGTATAATGAGAGCAAATTGGCTGCTCTGTGCTCGCCGAAGAAGATACAGCTCGGCCCGACATTTAAATGCTGTATA
TAGATTTTACCTCTAGTAAGATTGTTGTAAACTCAGCCACACCAAATTGTTCTCAAAATCATAAACTCGGTTGAAGAATTGTAACTATATATTAGTGTGCTTCCAAACAA
GAACATTTCACAAATTATCATTTTTTTTTTCTTTCAATATGTTCTGAGTTCTCTCTCTGTAATTGGAAGCTTCCTTCTTATAAAGCAGAAGAATGTCTTCCTCCTTGTTT
TTCTTCTTCGTTTGTATCTTGAGTTTGTACAAGGC
Protein sequenceShow/hide protein sequence
MGSMLGDLPSYDPHNFTQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIRHIYQHTEEKSRTKRPAPEHPAPEHGSKQPRASTANTSN