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Sed0012861 (gene) of Chayote v1 genome

Gene IDSed0012861
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationLG05:4760486..4763536
RNA-Seq ExpressionSed0012861
SyntenySed0012861
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0042719 - mitochondrial intermembrane space protein transporter complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]1.0e-3593.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSS QFS +EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

XP_022159838.1 mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia]1.8e-3593.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSG SSQFS  EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVSKALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]9.3e-3794.25Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSSSQFSP+EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEAT IVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

XP_023520535.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo]7.9e-3693.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSSSQFSP+EFRDQLKTQLAQAYAEEFLETLRVKCF KCITKPGSSLSGSESSC+ RCMERYIEAT IVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]2.7e-3694.25Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSSSQFS +EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit5.0e-3693.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSS QFS +EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit5.0e-3693.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSS QFS +EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit8.5e-3693.1Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSG SSQFS  EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEATSIVSKALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit4.5e-3794.25Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSSSQFSP+EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEAT IVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit4.5e-3794.25Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH
        MDSFSSPSSGSSSQFSP+EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSC+ RCMERYIEAT IVS+ALFKTPH
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH

SwissProt top hitse value%identityAlignment
Q6DGJ3 Mitochondrial import inner membrane translocase subunit Tim132.4e-1146.99Show/hide
Query:  MDSFSSP-SSGSSS-QFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA
        M+ F S  SSGSSS +       +Q+K Q+A A A+E L+ +  KCF KCI KPGS+L  SE  C+  CM+RY++A + VS+A
Subjt:  MDSFSSP-SSGSSS-QFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA

Q8AVK1 Mitochondrial import inner membrane translocase subunit Tim13-B1.8e-1146.43Show/hide
Query:  MDSFSSPSS---GSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA
        MD F S  S    SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL  SE  CV  CM+RY++A +IVS+A
Subjt:  MDSFSSPSS---GSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA

Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim133.0e-2268.24Show/hide
Query:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKT
        MDSFSS SSGS    +     DQ+K QLAQAYA+EFLET+  KCF KC+TKPGSSLSGSESSC+ RC++RYIEAT IVS+ALF +
Subjt:  MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKT

Q9XH48 Mitochondrial import inner membrane translocase subunit TIM133.8e-2567.86Show/hide
Query:  MDSFSS-PSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALF
        MDS+SS P  GS S  SP    + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSC+ RC+ERY+EAT+I+S++LF
Subjt:  MDSFSS-PSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALF

Q9Y5L4 Mitochondrial import inner membrane translocase subunit Tim135.4e-1145.57Show/hide
Query:  FSSPSSGS-SSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA
        F S   GS S +  P    +Q+K Q+A A A+E L+ +  KCF KCI KPG SL  SE  C+  CM+RY++A + VS+A
Subjt:  FSSPSSGS-SSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKA

Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 132.7e-2667.86Show/hide
Query:  MDSFSS-PSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALF
        MDS+SS P  GS S  SP    + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSC+ RC+ERY+EAT+I+S++LF
Subjt:  MDSFSS-PSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALF

AT5G50810.1 translocase inner membrane subunit 81.8e-0639.66Show/hide
Query:  LKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCVLRCMERYIEATSIVSK
        L  +  +A   E +  +   C+DKCIT  PGS  S SESSC+  C +RY++ + I+ K
Subjt:  LKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCVLRCMERYIEATSIVSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTTTCGTCGCCTTCAAGCGGTTCTTCTTCCCAGTTTTCGCCCTCTGAATTCAGGGATCAGCTCAAGACTCAGCTTGCACAGGCCTACGCCGAGGAGTTTCT
CGAGACCTTGAGGGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCGTCTTGAGGTGCATGGAGCGCTATATCGAGG
CCACCAGCATCGTCAGCAAAGCCTTGTTCAAGACGCCACATTGA
mRNA sequenceShow/hide mRNA sequence
CCTCGAACGAAAAAAACCCTAGTCTAATAGAGCTGGGTAAGGTTGAGGCAGACACCAAGGGCTCGCCCTAATTACACTGCGCCATAGCAATTCACGAAACTACAAAAGGG
CAGTCACTGGTTTCTGTAGGGTTTTCGCGATCGCCGAACCAATGGATTCATTTTCGTCGCCTTCAAGCGGTTCTTCTTCCCAGTTTTCGCCCTCTGAATTCAGGGATCAG
CTCAAGACTCAGCTTGCACAGGCCTACGCCGAGGAGTTTCTCGAGACCTTGAGGGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGA
GAGCAGTTGCGTCTTGAGGTGCATGGAGCGCTATATCGAGGCCACCAGCATCGTCAGCAAAGCCTTGTTCAAGACGCCACATTGATAGAGAGGTTTTGCGGAGAAATTAT
GAGTTCGAGGTATCTTTAGCGACCTACCATTTTTATGGGATTCCCCATTTGATATTTGTTTTCCAGCTCTGGAAACTTTGGTCAGGAGAGACATACTTTTGAGTTTTGAT
TTTGAGGCCCTATAGATAATATTTTGGTATTCATGTACCTGATTTACTGACATGTCAACTTTGGTTCAATTAAACTATTTCTTCTCAGTTAATTCTCAGCAAAGCTGTTA
AGATACTTTTGATCGGATTAAATAGTTCAGTGGCTAGGAGGAGGTGAAATGATTTTGAAAATTGCAGTGGTGGCTAATTCCAGACCTTTCTTTAAAGGTTAGGATCACAT
ATTGATG
Protein sequenceShow/hide protein sequence
MDSFSSPSSGSSSQFSPSEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCVLRCMERYIEATSIVSKALFKTPH