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Sed0012891 (gene) of Chayote v1 genome

Gene IDSed0012891
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:41326258..41329063
RNA-Seq ExpressionSed0012891
SyntenySed0012891
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570850.1 QWRF motif-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4188.89Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAA RQARA  LTRVSSP SAATLI RRGLAGAADHHGPPK+NCW DPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFTGGKGKKDEKL E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
XP_022140380.1 uncharacterized protein LOC111011068 [Momordica charantia]1.2e-4087.88Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAAVRQARA  LTRVSSP S ATLIHRRGLAGAADHHGPPK+NCW+DPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFT GKGKK+EKL E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
XP_022944460.1 uncharacterized protein LOC111448907 [Cucurbita moschata]5.4e-4188.89Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAA RQARA  LTRVSSP SAATLI RRGLAGAADHHGPPK+NCW DPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFTGGKGKKDEKL E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
XP_023532872.1 uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]6.0e-4092.47Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEK
        MATLAAAAVRQARA  LTRVSSP S ATLI RRGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL YGGYKFFTGGKGKKDEK
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEK
XP_038900519.1 uncharacterized protein LOC120087716 [Benincasa hispida]2.1e-4087.88Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAAVRQARA  LTRVSSP S ATLIHRRGLAGAADHHG PK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFT GKGKKDEK+ E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
TrEMBL top hitse value%identityAlignment
A0A1S3BJS2 uncharacterized protein LOC1034904671.9e-3983.84Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAAVRQARA  L RVSSP S A LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWG+LI+GGYKFFT GKG KDEK+ E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
A0A5A7U364 Uncharacterized protein2.3e-3786.96Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDE
        MATLAAAAVRQARA  L RVSSP S A LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWGLLI+GGYKFFT GKG KDE
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDE
A0A6J1CEY6 uncharacterized protein LOC1110110685.9e-4187.88Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAAVRQARA  LTRVSSP S ATLIHRRGLAGAADHHGPPK+NCW+DPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFT GKGKK+EKL E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
A0A6J1FYP0 uncharacterized protein LOC1114489072.6e-4188.89Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
        MATLAAAA RQARA  LTRVSSP SAATLI RRGLAGAADHHGPPK+NCW DPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFTGGKGKKDEKL E SQ
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ
A0A6J1I3K1 uncharacterized protein LOC1114695972.5e-3990.32Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEK
        MATLAA AVRQARA  LTR SSP S ATLI RRGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL YGGYKFFTGGKGKKDEK
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein1.3e-1955.17Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGK
        MA+ A  A+  A+ +   R+SS   AA++  RR LAGAADHHG  K++ W+ P +P  WKEEHFV++SLSGWGLL Y GYK  TGGK
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGK
AT2G20820.2 unknown protein2.9e-0846.15Show/hide
Query:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFV
        MA+ A  A+  A+ +   R+SS   AA++  RR LAGAADHHG  K++ W+ P +P  WKEEH++
Subjt:  MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCCTTGCGGCGGCTGCAGTTCGTCAAGCCAGAGCCCTAACCCTAACCCGAGTTTCATCTCCTCACTCAGCCGCCACTCTTATTCACCGGCGCGGCCTCGCTGG
AGCTGCTGACCACCATGGACCACCGAAGATTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTTTCTCTATCGGGATGGGGTC
TACTCATCTATGGAGGGTACAAGTTCTTTACCGGAGGCAAAGGAAAGAAGGATGAGAAACTTGCGGAACCATCACAATGA
mRNA sequenceShow/hide mRNA sequence
GAGGAAATGCGACGTCGTTTGGCTTTGCCTGTGATTGATTTGAAGCGGTCAGGTCTCAATTTCTTAGTTCCATTCGGCCGTATCAGCGTCATTGATCTCTCTCTTTCTCT
CTGCGGGGAACAGAATCTGAATCCATGGCTACCCTTGCGGCGGCTGCAGTTCGTCAAGCCAGAGCCCTAACCCTAACCCGAGTTTCATCTCCTCACTCAGCCGCCACTCT
TATTCACCGGCGCGGCCTCGCTGGAGCTGCTGACCACCATGGACCACCGAAGATTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGA
TTGTTTCTCTATCGGGATGGGGTCTACTCATCTATGGAGGGTACAAGTTCTTTACCGGAGGCAAAGGAAAGAAGGATGAGAAACTTGCGGAACCATCACAATGAGTTGAG
CTATGGACACTTTCCGATTGTTCTGAAGCACTCCCGTAATAATGTATTTCCTTGGACCTCATACGTCTGTGGATTTCATTTCAATATCGAATTGTTTCTCAGACTAGTAT
ATTATGTTATATTGTAGCTGTTTCTTGATATTTTGGTTGTTTTATGCACTGAAGTCCTATATCTAATAATATGATTTTACCAACATTTAAGCCCCAACACCTCATTATAA
TTTGAAGGGTGAGCATCTTTGGTTCCGAGACTGTGATCGAAC
Protein sequenceShow/hide protein sequence
MATLAAAAVRQARALTLTRVSSPHSAATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIYGGYKFFTGGKGKKDEKLAEPSQ