; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012892 (gene) of Chayote v1 genome

Gene IDSed0012892
OrganismSechium edule (Chayote v1)
DescriptionTranslocase subunit seca
Genome locationLG07:36365329..36367189
RNA-Seq ExpressionSed0012892
SyntenySed0012892
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601286.1 hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6977.6Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

XP_004135095.1 uncharacterized protein LOC101219538 [Cucumis sativus]7.5e-6777.22Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG
        MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCG
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG

Query:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        SPPSRVANPLIQDARF +E+FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Subjt:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

XP_022957437.1 uncharacterized protein LOC111458833 [Cucurbita moschata]4.7e-6977.6Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

XP_022986983.1 uncharacterized protein LOC111484540 [Cucurbita maxima]3.1e-6877.05Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIP  P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

XP_023517111.1 uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo]6.2e-6977.6Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

TrEMBL top hitse value%identityAlignment
A0A0A0KWF7 Uncharacterized protein3.7e-6777.22Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG
        MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCG
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG

Query:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        SPPSRVANPLIQDARF +E+FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Subjt:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

A0A1S3BG95 uncharacterized protein LOC1034892873.7e-6777.22Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG
        MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCG
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG

Query:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        SPPSRVANPLIQDARF +E+FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Subjt:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

A0A5D3CB96 Uncharacterized protein3.7e-6777.22Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG
        MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCG
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCG

Query:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        SPPSRVANPLIQDARF +E+FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Subjt:  SPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

A0A6J1GZ47 uncharacterized protein LOC1114588332.3e-6977.6Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

A0A6J1JI50 uncharacterized protein LOC1114845401.5e-6877.05Show/hide
Query:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF
        MNHC ILSNAFS  HEEMR PV           VCPKPRRLS+ K   +  AD+SLR+NL+H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPF
Subjt:  MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPF

Query:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        LCGSPPSRVANPLIQDARFGDE+FIP  P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IPAFA
Subjt:  LCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.3e-2439.44Show/hide
Query:  MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGS
        MN C I  NAF     +    + R  V+CPKPRR   L+H     +  SLR+ LNH +E  +  +G ++LDF+L K GG   +Q  T+   +PP F  GS
Subjt:  MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGS

Query:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        PPSRV+NPL +D+ F +E  +   P         P   +S + G   + A SFGN P VR+ GFDC DR   N  I   A
Subjt:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA

AT1G13390.2 unknown protein1.3e-2439.44Show/hide
Query:  MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGS
        MN C I  NAF     +    + R  V+CPKPRR   L+H     +  SLR+ LNH +E  +  +G ++LDF+L K GG   +Q  T+   +PP F  GS
Subjt:  MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGS

Query:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        PPSRV+NPL +D+ F +E  +   P         P   +S + G   + A SFGN P VR+ GFDC DR   N  I   A
Subjt:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA

AT1G68490.1 unknown protein7.3e-3648.39Show/hide
Query:  MNHCPILSNAFSGGH----------EEMRSPVVCPKPRRLSHR-KLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSP-PFLC
        MNH  +  NAF+ G           E  ++ VVCPKPRR+  R        SLR   +H +E  +  A  D+LD +L K G   +Q   Q+  SP PFLC
Subjt:  MNHCPILSNAFSGGH----------EEMRSPVVCPKPRRLSHR-KLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSP-PFLC

Query:  GSPPSRVANPLIQDARFGDE-----QFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA
        GSPPSRVANPL QDARF DE       IP     PPS   SPS+++ RK GG  VR +FGN P VR+EGFDCLDRD +NC IPA A
Subjt:  GSPPSRVANPLIQDARFGDE-----QFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

AT3G02555.1 unknown protein1.9e-2846.11Show/hide
Query:  MNHCPILSNAFSGGHEEMR----------SPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGS
        MNHC +  NAF    EE R            VVCPKPRR ++   P     L F+L+   +  D  AG DLLD    K   S        + SPPF  GS
Subjt:  MNHCPILSNAFSGGHEEMR----------SPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGS

Query:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKP-TVRIEGFDCLDRDRQNCRIPAFA
        PPSR ANPL QDARFGDE+     P   P   L PSA+  + G G   R  FG KP TVR+EGFDCL+RDR N  IPA A
Subjt:  PPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKP-TVRIEGFDCLDRDRQNCRIPAFA

AT5G16110.1 unknown protein1.8e-2943.96Show/hide
Query:  MNHCPILSNAFSGGHEEM----RSPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQI-DMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPPFLCGSPPSR
        MNHC +  NAF    E M    +  VVCPKPRR+           LR +++     + D  AG +LL+ +  K    ++ Q    L+SSPP+  GSPPSR
Subjt:  MNHCPILSNAFSGGHEEM----RSPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQI-DMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPPFLCGSPPSR

Query:  VANPLIQDARFGDEQFIPFPPMAP------PSGQLSPSATASRKGGGGRVRASFG-NKPTVRIEGFDCLDRDRQNCRIPAFA
         ANPL QDARF DE+  P  P +P       +G  SPS+++S     G VR  FG N P VR+EGFDCL+RDRQN  IPA A
Subjt:  VANPLIQDARFGDEQFIPFPPMAP------PSGQLSPSATASRKGGGGRVRASFG-NKPTVRIEGFDCLDRDRQNCRIPAFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACTGCCCCATTTTATCAAACGCCTTCTCGGGCGGCCACGAAGAGATGAGATCCCCTGTGGTTTGTCCTAAGCCACGCCGTCTCTCCCATCGTAAGCTCCCCGG
TGCCGATACCTCTCTCCGGTTCAATCTTAATCACCCAGTAGAGCAGATTGATATGCCTGCTGGACCCGATCTGCTCGACTTCCTCCTCGCTAAGGGTGGTTGCAGTGTGG
ATCAATCATATACGCAGTTGGCTTCGTCGCCCCCATTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGATGCCCGATTCGGGGACGAACAATTC
ATCCCCTTTCCTCCAATGGCTCCACCGTCTGGTCAGTTGTCGCCCTCTGCAACAGCCTCCAGGAAAGGAGGAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAAC
GGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAACTGCAGAATCCCTGCCTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
GCTAAATTGGGAAGGCAAGAGATTGGCCAAGCGAGTTGGGAACCGTTGCTGGTCTTCCTCTTCCTCCGCCTTATCTCTCTGTTCTCGATATTTTTAAGCTCTGCTCTTGT
GATTGGCTTTGTCACTCCTAAACCCCATTCCCAAACGCCTTCCCCTTCTTTTTCAGCTTTATTTGTCCCTTGAAATAACCCAAACGCGGATATGAATCACTGCCCCATTT
TATCAAACGCCTTCTCGGGCGGCCACGAAGAGATGAGATCCCCTGTGGTTTGTCCTAAGCCACGCCGTCTCTCCCATCGTAAGCTCCCCGGTGCCGATACCTCTCTCCGG
TTCAATCTTAATCACCCAGTAGAGCAGATTGATATGCCTGCTGGACCCGATCTGCTCGACTTCCTCCTCGCTAAGGGTGGTTGCAGTGTGGATCAATCATATACGCAGTT
GGCTTCGTCGCCCCCATTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGATGCCCGATTCGGGGACGAACAATTCATCCCCTTTCCTCCAATGG
CTCCACCGTCTGGTCAGTTGTCGCCCTCTGCAACAGCCTCCAGGAAAGGAGGAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTC
GATTGCCTCGACAGGGATAGGCAAAACTGCAGAATCCCTGCCTTTGCTTAGAAACCCATCTCCATATCAAAATCCATAAAACAATACAAGACAAAGACACATTACACTTC
CAAGAGAAGTGATTTCCCAAATACAACAGAAGAGATGAATATCAAGATCTCTCAAGAGAAGAATACAATTTCCCCCTTTTTTTTGTGAATACGTTTGAAGTTCTTTGTAA
ATGTAAGTAAAAATCAAAAGCTGTGTATTTTTCAGGCAGTTCTTTTTCGAGTCGATAATGCGTGGGGAAGGTCAACCTCTTGTATTATATTTTTGTAATTAGAAGTGTTA
TGGTTGAGGAAATTTTCATTGTGTAGTGGGTTGGTTTTTGGATCATTTGAAGATGAAAGGCAAATGTGTACATATTGCAGAAGTTATCAACATGTGAATATTGTAGAACA
Protein sequenceShow/hide protein sequence
MNHCPILSNAFSGGHEEMRSPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQF
IPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA