; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012898 (gene) of Chayote v1 genome

Gene IDSed0012898
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG10:5135819..5136683
RNA-Seq ExpressionSed0012898
SyntenySed0012898
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604115.1 VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5774.25Show/hide
Query:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP
        M+ FCAY+SS+S+            S+ VR EFSSYSNNNLHCVRKPMAKPWKKPAIAPLPP RPRVYKVDP++FR+LVQKLTG AEL RSPRLQKMAPP
Subjt:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP

Query:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PLDIAR P S    VEA+  LQ  PV+L D+AVDGG FLELNLSPFNKNWC FPALSPESLA+LDAI
Subjt:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

XP_008440419.1 PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo]6.7e-5469.01Show/hide
Query:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS--NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQK
        MD FCAY+SS            N  S+H  V+ EFS+YS  NNN+HCVRKPMAKPWKKPAIAPLPP RPRVYKVDP++FR LVQKLTG AEL RSPRLQK
Subjt:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS--NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQK

Query:  MAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        MAPPPLDI+RR  + + AVE T F  +  +K+ ++AVDGG FLELNLSPFNKNWC FPALSPE+LAILDAI
Subjt:  MAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

XP_011657908.1 uncharacterized protein LOC105435910 [Cucumis sativus]1.6e-5569.82Show/hide
Query:  MDTFCAYSSSNSNS--------------DHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMA
        MD FCAY+SS+S+S                V+ E SSYSNNN+HCVRKPM KPWKKPAIAPLPP RPRVYKVDP++FR LVQKLTG AEL RSPRLQKMA
Subjt:  MDTFCAYSSSNSNS--------------DHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMA

Query:  PPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PPPLDI+RR  S + AVE T F  +S +K+ ++AVDGG FLELNLSPFNKNWC FPALSPE+LAILDAI
Subjt:  PPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

XP_022950153.1 uncharacterized protein LOC111453330 [Cucurbita moschata]4.2e-5673.65Show/hide
Query:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP
        M+ FCAY+SS+S+            S+ VR EFSSYSNNNLHCVRK MAKPWKKPAIAPLPP RPRVYKVDP++FR+LVQKLTG AEL RSPRLQKMAPP
Subjt:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP

Query:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PLDIAR P S    VEA+  LQ  PV+L D+AVDGG FLELNLSPFNKNWC FPALSPESLA+LDAI
Subjt:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

XP_038883814.1 uncharacterized protein LOC120074676 [Benincasa hispida]1.8e-5973.84Show/hide
Query:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS---NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQ
        MD FCAY+SS            N  S+H  VR EFSSYS   N+NLHC+RKPMAKPWKKPAIAPLPP RPRVYKVDP++FRDLVQKLTG AEL RSPRLQ
Subjt:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS---NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQ

Query:  KMAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        KMAPPPLDI+RRP SG+ AVEAT F  + PVKL ++AVDGG FLELNLSPFNKNWC FPALSPE+LAILDAI
Subjt:  KMAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

TrEMBL top hitse value%identityAlignment
A0A0A0KJR2 VQ domain-containing protein7.7e-5669.82Show/hide
Query:  MDTFCAYSSSNSNS--------------DHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMA
        MD FCAY+SS+S+S                V+ E SSYSNNN+HCVRKPM KPWKKPAIAPLPP RPRVYKVDP++FR LVQKLTG AEL RSPRLQKMA
Subjt:  MDTFCAYSSSNSNS--------------DHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMA

Query:  PPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PPPLDI+RR  S + AVE T F  +S +K+ ++AVDGG FLELNLSPFNKNWC FPALSPE+LAILDAI
Subjt:  PPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

A0A1S3B142 uncharacterized protein LOC1034848693.3e-5469.01Show/hide
Query:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS--NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQK
        MD FCAY+SS            N  S+H  V+ EFS+YS  NNN+HCVRKPMAKPWKKPAIAPLPP RPRVYKVDP++FR LVQKLTG AEL RSPRLQK
Subjt:  MDTFCAYSSS------------NSNSDH--VRTEFSSYS--NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQK

Query:  MAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        MAPPPLDI+RR  + + AVE T F  +  +K+ ++AVDGG FLELNLSPFNKNWC FPALSPE+LAILDAI
Subjt:  MAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

A0A6J1GE45 uncharacterized protein LOC1114533302.0e-5673.65Show/hide
Query:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP
        M+ FCAY+SS+S+            S+ VR EFSSYSNNNLHCVRK MAKPWKKPAIAPLPP RPRVYKVDP++FR+LVQKLTG AEL RSPRLQKMAPP
Subjt:  MDTFCAYSSSNSN------------SDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP

Query:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PLDIAR P S    VEA+  LQ  PV+L D+AVDGG FLELNLSPFNKNWC FPALSPESLA+LDAI
Subjt:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

A0A6J1HHA9 uncharacterized protein LOC1114634793.7e-5070.06Show/hide
Query:  MDTFCAYSSS------------NSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP
        M+ FCAY+SS            N  S++VR E SSYS N+L CVRKP++KPWKKPAIAPLPP RPRVYKVD + F+DLVQKLTG  EL  SPRLQKMAPP
Subjt:  MDTFCAYSSS------------NSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPP

Query:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
        PL IA R GSG  AVEATPFL  SPVKL D+A DGG FLELNLSPFNKNW  FPALSP SLAI DAI
Subjt:  PLDIARRPGSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

A0A6J1IPH4 uncharacterized protein LOC1114776404.2e-5474.84Show/hide
Query:  MDTFCAYSSSNSNSDHV----RTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPPPLDIARRP
        ++ FCAY+SS+S+S       + + SSYSNNNLH VRKPMAKPWKKPAIAPLPP RPRVYKVDP++FR+LVQKLTG AEL RSPRLQKMAPPPLDIAR P
Subjt:  MDTFCAYSSSNSNSDHV----RTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPPPLDIARRP

Query:  GSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI
         S    VEA+  LQ  PV+L D+AVDGG FLELNLSPFNKNWC FPALSPESLAILDAI
Subjt:  GSGTGAVEATPFLQTSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI

SwissProt top hitse value%identityAlignment
Q9SZG3 VQ motif-containing protein 291.4e-0644.93Show/hide
Query:  SSSNSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAI-APLPPARPRVYKVDPVHFRDLVQKLTGSAE
        S S  N+    T  +     +LH  RK  +KP K+PAI +PL P  P VY+V+PV+F+ LVQ+LTG+ E
Subjt:  SSSNSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAI-APLPPARPRVYKVDPVHFRDLVQKLTGSAE

Arabidopsis top hitse value%identityAlignment
AT2G22880.1 VQ motif-containing protein1.7e-1032.03Show/hide
Query:  NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDD---AVD
        N++LH  RK  AKPWKKP         P+VY+V+PV+F++LVQ+LTG+ ++                           +    ++  PVK+ DD   A D
Subjt:  NNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPPPLDIARRPGSGTGAVEATPFLQTSPVKLVDD---AVD

Query:  GGCFLELNLSPFNKNWCCFPALSPESLA
             +L+ S  ++ W  FP LSP +L+
Subjt:  GGCFLELNLSPFNKNWCCFPALSPESLA

AT4G37710.1 VQ motif-containing protein1.0e-0744.93Show/hide
Query:  SSSNSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAI-APLPPARPRVYKVDPVHFRDLVQKLTGSAE
        S S  N+    T  +     +LH  RK  +KP K+PAI +PL P  P VY+V+PV+F+ LVQ+LTG+ E
Subjt:  SSSNSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAI-APLPPARPRVYKVDPVHFRDLVQKLTGSAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACATTTTGCGCATATTCTTCTTCAAATTCTAATTCTGACCACGTGAGGACAGAATTTTCCAGCTATTCCAATAATAACCTTCACTGCGTTCGAAAGCCGATGGC
GAAGCCGTGGAAGAAGCCGGCGATTGCGCCGCTGCCGCCGGCTCGCCCGAGGGTTTACAAAGTGGACCCGGTTCACTTCAGGGACTTGGTTCAGAAACTAACCGGCTCGG
CCGAGCTGATCCGATCTCCGCGGCTCCAAAAAATGGCCCCGCCGCCGCTTGACATTGCGCGCCGCCCAGGCTCCGGTACCGGCGCGGTGGAAGCCACCCCGTTTCTCCAA
ACTTCGCCGGTGAAGCTGGTGGACGACGCCGTGGACGGTGGCTGCTTTCTTGAGCTGAATTTGTCGCCTTTCAATAAAAATTGGTGCTGTTTCCCTGCTTTGAGTCCTGA
AAGTCTTGCCATTTTGGATGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
TATTATATTTTAGAAATCATCTTTTTTGTTTATATAAATGCAACATTTTGGGGCTATACTTTTCTCATCATTTCACTTGGATTTTGATAAACTGATCCATTATCTAAAAC
AAAACTCCTTGGTACAAGTTCCCAATGGATACATTTTGCGCATATTCTTCTTCAAATTCTAATTCTGACCACGTGAGGACAGAATTTTCCAGCTATTCCAATAATAACCT
TCACTGCGTTCGAAAGCCGATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCGCCGCTGCCGCCGGCTCGCCCGAGGGTTTACAAAGTGGACCCGGTTCACTTCAGGGACT
TGGTTCAGAAACTAACCGGCTCGGCCGAGCTGATCCGATCTCCGCGGCTCCAAAAAATGGCCCCGCCGCCGCTTGACATTGCGCGCCGCCCAGGCTCCGGTACCGGCGCG
GTGGAAGCCACCCCGTTTCTCCAAACTTCGCCGGTGAAGCTGGTGGACGACGCCGTGGACGGTGGCTGCTTTCTTGAGCTGAATTTGTCGCCTTTCAATAAAAATTGGTG
CTGTTTCCCTGCTTTGAGTCCTGAAAGTCTTGCCATTTTGGATGCAATTTAAATCTGTTCTTTAAAATGTTTAAGGTTTTTGTTTGTTGTTATTATTTTTATATGTGGTT
GGTTATAGCTAAAGATTGTTTACATTAAATTTGTTTGAGGATTTCTCTCAAAAGCTACATCTCTCTCTCTCTCTCTTTAAAATTGCACTTTAAAGTGTATTAAGTCTGTA
AGCTATCACCCTTTTAATCCTAGAAAATGATCATTTACTACATTCTCTGTAAAATAATTGTAACTTCATACAATATTTGTGTAACTTTACTTTAG
Protein sequenceShow/hide protein sequence
MDTFCAYSSSNSNSDHVRTEFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPARPRVYKVDPVHFRDLVQKLTGSAELIRSPRLQKMAPPPLDIARRPGSGTGAVEATPFLQ
TSPVKLVDDAVDGGCFLELNLSPFNKNWCCFPALSPESLAILDAI