CuGenDBv2

Gene ID	Sed0012938
Organism	Sechium edule (Chayote v1)
Description	Plus3 domain-containing protein
Genome location	LG07:15677259..15681641
RNA-Seq Expression	Sed0012938
Synteny	Sed0012938
Gene Ontology terms	GO:0016593 - Cdc73/Paf1 complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:1990269 - RNA polymerase II C-terminal domain phosphoserine binding (molecular function)
InterPro domains	IPR004343 - Plus-3 domain IPR036128 - Plus3-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149150.1 protein RTF1 homolog [Cucumis sativus]

0.0e+00

90.15

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDP +RDDD GSQEEG+DEDVG +REGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN N+RR SPTKRKPFTAPSLSSSSQSESESR QS+DE STGDGGM+DSDDERS+PGSDGPTFEDIKE+TIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNE+SAARWQMAMVSDSAPLEDEYKQW+KEVERTGGRMLSKQDI EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQKVNNFVYSAATVKQMLQ+KKSAS+RPLNIAAEKDRLRRE+DVA+SK+D+   E+I   LQQL+ASRR QMKDAKAIRL EMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA  N DNV PA E              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLAMLQKFGG LGAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

XP_023522520.1 protein RTF1 homolog isoform X1 [Cucurbita pepo subsp. pepo]

0.0e+00

90.3

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA+RDDDAGSQEEGD+EDVG DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAK DKGK APSRKET PLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSS  SESESR QSEDEESTGDGGM+DSDDERSM G  GPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERT GRMLSKQD+ EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQK NNFVYSAATVKQML+EKKSASSRPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQL+ASRR QMKD KAIRLVEMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEAG N DN +PASE              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLA+LQKFGGP+GAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

XP_023522521.1 protein RTF1 homolog isoform X2 [Cucurbita pepo subsp. pepo]

0.0e+00

90.3

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA+RDDDAGSQEEGD+EDVG DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAK DKGK APSRKET PLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSS  SESESR QSEDEESTGDGGM+DSDDERSM G  GPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERT GRMLSKQD+ EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQK NNFVYSAATVKQML+EKKSASSRPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQL+ASRR QMKD KAIRLVEMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEAG N DN +PASE              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLA+LQKFGGP+GAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

XP_023534918.1 protein RTF1 homolog [Cucurbita pepo subsp. pepo]

0.0e+00

90.15

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA+RDDDAGSQEEGD+EDVG DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAK DKGK APSRKET PLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSS  SESESR QSEDEESTGDGGM+DSDDERSM G  GPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAM+SDSAPLEDEYKQWLKEVERT GRMLSKQD+ EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQK NNFVYSAATVKQML+EKKSASSRPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQL+ASRR QMKD KAIRLVEMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEAG N DN +PASE              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLA+LQKFGGP+GAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

XP_038894309.1 protein RTF1 homolog [Benincasa hispida]

0.0e+00

90.61

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDP +RDDD GSQEEG+DEDVG +REGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGK APSRK+TPPLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKP TAPSLSSSSQSESESR QSEDE STGDGGM+DSDDERSMPGSDGPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQW+KEVE+TGGRMLSKQDI +KKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQKVNNFVYSAATVKQMLQ+KKSAS+RPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQLDASR+ QMKDAKAIRL EMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEAN AAEA  N DNV PA E              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLAMLQKFGG LGAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXW1 Plus3 domain-containing protein

0.0e+00

90.15

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDP +RDDD GSQEEG+DEDVG +REGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN N+RR SPTKRKPFTAPSLSSSSQSESESR QS+DE STGDGGM+DSDDERS+PGSDGPTFEDIKE+TIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNE+SAARWQMAMVSDSAPLEDEYKQW+KEVERTGGRMLSKQDI EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQKVNNFVYSAATVKQMLQ+KKSAS+RPLNIAAEKDRLRRE+DVA+SK+D+   E+I   LQQL+ASRR QMKDAKAIRL EMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA  N DNV PA E              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLAMLQKFGG LGAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

A0A1S3BXS8 protein RTF1 homolog

0.0e+00

89.24

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPSGSQVPLKKRLDP +RDDD GS EEG+DEDVG + EGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGK APSRKETPPLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSSSQSESESR QS+DE STGDGGM+DSDDERSMPGSDGPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNE+SAARWQMAMVSDSAPLEDEYKQW+KEVERTGGRMLSKQD+ EKK+A
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQKVNNFVYSAATVKQMLQ+KKSAS+RPLNIAAEKDRLRRE+DVA+SK+D+   E+I   LQQL+ASRR QMKDAKAIRL EMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA  N D V PA E              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLAMLQKFGG LGAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

A0A5A7TNN4 Protein RTF1-like protein

0.0e+00

89.24

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPSGSQVPLKKRLDP +RDDD GS EEG+DEDVG + EGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGK APSRKETPPLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSSSQSESESR QS+DE STGDGGM+DSDDERSMPGSDGPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNE+SAARWQMAMVSDSAPLEDEYKQW+KEVERTGGRMLSKQD+ EKK+A
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQKVNNFVYSAATVKQMLQ+KKSAS+RPLNIAAEKDRLRRE+DVA+SK+D+   E+I   LQQL+ASRR QMKDAKAIRL EMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA  N D V PA E              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLAMLQKFGG LGAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

A0A6J1FPT3 protein RTF1 homolog

0.0e+00

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA+RDDDAGSQEEGD+EDVG DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAK DKGK APSRKE  PLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSS  SESESR QSEDEESTGDGGMVDSDDERSM G  GPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERT GRMLSKQD+ EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQK NNFVYSAATVKQML+EKKSASSRPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQL+ASRR QMKD KAIRLVEMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEAG N DN +P SE              AATAAALEAAAGAGKL+DT+APVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLA+LQKFGGP+GAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

A0A6J1ITJ0 protein RTF1 homolog

0.0e+00

90.15

Show/hide

Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA+RDDDAGSQEEGD+EDVG DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP
        ESDVGDDLYKDDDDR KLAGMSELQREMILSDRASKKNDKHLYESLRAK DKGK APSRKET PLPSSRIRSSAR ADRAAAKDDALNELRAKRLKQQDP
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDP

Query:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI
        EAHRKLRDAS+GN NNRR SPTKRKPFTAPSLSSS  SESESR QSEDEESTGDGGMVDSDDERSM G  GPTFEDIKEITIRRSKL KWLMEPFFEELI
Subjt:  EAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELI

Query:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA
        VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENK+THKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERT GRMLS+QD+ EKKEA
Subjt:  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEA

Query:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP
        IQK NNFVYSAATVKQML++KKSASSRPLNIAAEKDRLRRE+DVALSK+D+   E+I A LQQL+ASRR QMKD KAIRLVEMNRKNRVENFKNASELRP
Subjt:  IQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRP

Query:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE
        +KDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEAG N DN +PASE              AATAAALEAAAGAGKL+DTNAPVDGGTES SLHNFE
Subjt:  MKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE--------------AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFE

Query:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
        LPISLA+LQKFGGP+GAQAGFLARKQ IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Subjt:  LPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

SwissProt top hits

e value

%identity

Alignment

A2AQ19 RNA polymerase-associated protein RTF1 homolog

3.7e-24

25.27

Show/hide

Query:  AGSDSRDDDSDDDRGYASRKPS--------GSQVPLKKRLDPA------DRDDDAGSQ--EEGDDED-----VGLDREGDSSGESD-----VGDDLYKDD
        A SDS   DSDD+  + S K            +  +KK+ + A      DRD  A S   EEG+  D          + DSS E +      G+DL  D+
Subjt:  AGSDSRDDDSDDDRGYASRKPS--------GSQVPLKKRLDPA------DRDDDAGSQ--EEGDDED-----VGLDREGDSSGESD-----VGDDLYKDD

Query:  DDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEA
        +DR +L  M+E +RE  L +R  K+         K   ++ + K  K K     +E      ++I+ S   +   +R + +D+ L++      K Q  E 
Subjt:  DDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEA

Query:  HRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEEL
         +  R+  K   N       K++P     + S  + E +    SE  + +      D ++E+  +P    P    E++  + + R KL +W   PFF + 
Subjt:  HRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEEL

Query:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE
        + GCFVR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W + +   G ++ +  +I++K+ 
Subjt:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE

Query:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNA
        +I++  N+ ++   ++++++EK+     P N A +K +L +E  +A    D+  A++I   L +L    +A  R + K+  AI  +  N++NR  N   +
Subjt:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNA

Query:  SELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAATAAALEAAAGAGKLIDTNAPV--DGGTESYSLHNFELPISLAM
         +    +         DPF+RR  + +   VSN+ +    A   + + N    S     A  E + G GK  D N+    D   + + +H+F++ I L +
Subjt:  SELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAATAAALEAAAGAGKLIDTNAPV--DGGTESYSLHNFELPISLAM

Query:  LQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
               L              A   +  P  DG     +L + DYK+RRGL+
Subjt:  LQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Q5RAD5 RNA polymerase-associated protein RTF1 homolog (Fragment)

7.2e-20

24.53

Show/hide

Query:  LLLEAAGRTNAAGRNRHSHPPSRRQREGSYSD----------AGSDSRDDDSDDDRGYAS--RKPSGSQVPLKKR------------LDPADRDDDAGSQ
        +++++    + +  N     PS  +R+ S S+          A SDS   DSDD+  + S   K  G    ++K+               +D+D  A S 
Subjt:  LLLEAAGRTNAAGRNRHSHPPSRRQREGSYSD----------AGSDSRDDDSDDDRGYAS--RKPSGSQVPLKKR------------LDPADRDDDAGSQ

Query:  --EEG-----DDEDVGLDREGDSSGESD-----VGDDLYKDDDDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETP
          EEG     D        + DSS E +      G+DL  D++DR +L  M+E +RE  L +R  K+         K   ++ + K  K K     +E  
Subjt:  --EEG-----DDEDVGLDREGDSSGESD-----VGDDLYKDDDDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETP

Query:  PLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDS
            ++I+ S   +   +R + +D+ L++      K Q  E  +  R+  K   N       K++P     + S  + E E    SE  + +      D 
Subjt:  PLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDS

Query:  DDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAA
        ++E+  +P    P    E++  + + R KL +W   PFF + + GCFVR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    
Subjt:  DDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAA

Query:  RWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEAIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKI
        R  +  VS+    E E+ +W + +   G ++ +  +I++K+ +I++  N+ ++   ++++++EK+     P N A +K +L +E  +A    D+  A++I
Subjt:  RWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEAIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKI

Query:  NASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAAT
           L +L    +A  R + K+  AI  +  N++NR  N   + +    +         DPF+RR  + +   VSN+ +    A   + + N    S    
Subjt:  NASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAAT

Query:  AAALEAAAGAGKLIDTN--APVDGGTESYSLHNFELPISL
         A  E + G GK  D N  +  D   + + +H+F++ I L
Subjt:  AAALEAAAGAGKLIDTN--APVDGGTESYSLHNFELPISL

Q92541 RNA polymerase-associated protein RTF1 homolog

8.3e-24

25.11

Show/hide

Query:  AGSDSRDDDSDDDRGYAS--RKPSGSQVPLKKR------------LDPADRDDDAGSQ--EEG-----DDEDVGLDREGDSSGESD-----VGDDLYKDD
        A SDS   DSDD+  + S   K  G    ++K+               +D+D  A S   EEG     D        + DSS E +      G+DL  D+
Subjt:  AGSDSRDDDSDDDRGYAS--RKPSGSQVPLKKR------------LDPADRDDDAGSQ--EEG-----DDEDVGLDREGDSSGESD-----VGDDLYKDD

Query:  DDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEA
        +DR +L  M+E +RE  L +R  K+         K   ++ + K  K K     +E      ++I+ S   +   +R + +D+ L++      K Q  E 
Subjt:  DDRLKLAGMSELQREMILSDRASKK-------NDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSS---ARFADRAAAKDDALNELRAKRLKQQDPEA

Query:  HRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEEL
         +  R+  K   N       K++P     + S  + E E    SE  + +      D ++E+  +P    P    E++  + + R KL +W   PFF + 
Subjt:  HRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDER-SMPGSDGPTF--EDIKEITIRRSKLGKWLMEPFFEEL

Query:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE
        + GCFVR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W + +   G ++ +  +I++K+ 
Subjt:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE

Query:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNA
        +I++  N+ ++   ++++++EK+     P N A +K +L +E  +A    D+  A++I   L +L    +A  R + K+  AI  +  N++NR  N   +
Subjt:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQL----DASRRSQMKDAKAIRLVEMNRKNRVENFKNA

Query:  SELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAATAAALEAAAGAGKLIDTN--APVDGGTESYSLHNFELPISLAM
         +    +         DPF+RR  + +   VSN+ +    A   + + N    S     A  E + G GK  D N  +  D   + + +H+F++ I L +
Subjt:  SELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASEAATAAALEAAAGAGKLIDTN--APVDGGTESYSLHNFELPISLAM

Query:  LQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
               L              A   +  P  DG     +L + DYK+RRGL+
Subjt:  LQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Q9C950 Protein RTF1 homolog

1.1e-228

69.57

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Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        M DLENLLLEAAGRTN+AGR+R  HPPS R+REGSYSD  SDSR DDSD+DRGYASRKPSGSQVPLKKRL+ A+R+D A ++ EG   D   DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSR-IRSSARFADRAAAKDDALNELRAKRLKQQD
        ESD GDDLYK+++DR KLAGM+E QREMILS+RA KK DK+  E LR+K +  K   S+KET PLP+SR +RSSAR ADRAAAKDDALNELRAKR+KQQD
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSR-IRSSARFADRAAAKDDALNELRAKRLKQQD

Query:  PEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEEL
        P A RKLRDASKG   +R  S TKRKP  + +LSSSSQS+S+SR QS+DE S  +GGM+DSDD+R    SD PTFED+KE+TIRRSKL KWLMEPFFEEL
Subjt:  PEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEEL

Query:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE
        IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQMAM+SD  PLE+EY+QW++EVERT GRM +KQDISEKKE
Subjt:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE

Query:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELR
        AIQ+ N+FVYSA TVKQMLQEKKSAS RP+N+AAEKDRLR+EL++A SK+D+   E+I + ++QLDASR  +  D KA++L EMN+KNR ENFKNASE++
Subjt:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELR

Query:  PM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEANGAAEAGSNIDNVLPASEA--ATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLA
         +   LKAGEAGYDPFSRRWTRS NYY        GE N AA A +   N   A     AT AALEAAA AGKLIDT AP+  G E   LHNFEL +SL 
Subjt:  PM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEANGAAEAGSNIDNVLPASEA--ATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLA

Query:  MLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
         LQK+GGP G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRRGLL
Subjt:  MLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Q9W261 RNA polymerase-associated protein Rtf1

1.2e-14

22.8

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Query:  SHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDR-----------------EGDSSGESDVGD
        S    +RQ+    S +   + DDDS D+R  A + P+ +Q    K  + A +      QEEG+  D   D+                   DS  +    D
Subjt:  SHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDR-----------------EGDSSGESDVGD

Query:  DLYKDDDDRLKLAGMS----------------------ELQREMILSDRASKKNDKHLYESLRAKMDK----GKAAPSRKETPPL---------------
        DL  DD+DR +L G+S                      E++R++ L+ R  K  +K   +  RAK  K     KA  +R+   PL               
Subjt:  DLYKDDDDRLKLAGMS----------------------ELQREMILSDRASKKNDKHLYESLRAKMDK----GKAAPSRKETPPL---------------

Query:  PSSRIRSSARFA----DRAAAK----------DDALNEL-------RAKRLKQQDPEAHRKLRDASKGN----LNNRRPSPTKRKPFTAPSLSSSSQSES
        PS+ +RS++  +    +R AA           DDA +           +R K++         D  + N    L  +R    KR+   A  ++   + + 
Subjt:  PSSRIRSSARFA----DRAAAK----------DDALNEL-------RAKRLKQQDPEAHRKLRDASKGN----LNNRRPSPTKRKPFTAPSLSSSSQSES

Query:  ESRLQS-----------EDEESTGDGGMVDSDDERSMPGS--------------------DGPTF----EDIKEITIRRSKLGKWLMEPFFEELIVGCFV
        +  L S             E  + D G  D D+E    G                       P F    ED+ ++ + R K+ +++  P FE  ++ CFV
Subjt:  ESRLQS-----------EDEESTGDGGMVDSDDERSMPGS--------------------DGPTF----EDIKEITIRRSKLGKWLMEPFFEELIVGCFV

Query:  RVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEAIQKVN
        R+ IG +   P+YR+  +  V   E  + Y L    T++ L +  G +    R  +  +S+    E+E+ +W +  +++  +M +   I+ K+  I+K  
Subjt:  RVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEAIQKVN

Query:  NFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQM--KDAKAIRLV----EMNRKNRVENFKNA--SE
        N+ +    V ++++EK    +RP N A +K  L +E D A+ + D   A+ +   + +L+ +R S++  + +  + L+    + NRK  VE+ + A   E
Subjt:  NFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQM--KDAKAIRLV----EMNRKNRVENFKNA--SE

Query:  LRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNV-LPASEAATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLAMLQK
         R  K LK      DPF+RR T+ R  +        GA +   ++    LP          EA   +  +  T++        YSLH+F++ + +     
Subjt:  LRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNV-LPASEAATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLAMLQK

Query:  FGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
           PL      + +          +  E   +R   +L + DYK++RGL+
Subjt:  FGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Arabidopsis top hits

e value

%identity

Alignment

AT1G61040.1 plus-3 domain-containing protein

7.5e-230

69.57

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Query:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG
        M DLENLLLEAAGRTN+AGR+R  HPPS R+REGSYSD  SDSR DDSD+DRGYASRKPSGSQVPLKKRL+ A+R+D A ++ EG   D   DREGDSS 
Subjt:  MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSG

Query:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSR-IRSSARFADRAAAKDDALNELRAKRLKQQD
        ESD GDDLYK+++DR KLAGM+E QREMILS+RA KK DK+  E LR+K +  K   S+KET PLP+SR +RSSAR ADRAAAKDDALNELRAKR+KQQD
Subjt:  ESDVGDDLYKDDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSR-IRSSARFADRAAAKDDALNELRAKRLKQQD

Query:  PEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEEL
        P A RKLRDASKG   +R  S TKRKP  + +LSSSSQS+S+SR QS+DE S  +GGM+DSDD+R    SD PTFED+KE+TIRRSKL KWLMEPFFEEL
Subjt:  PEAHRKLRDASKGNLNNRRPSPTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEEL

Query:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE
        IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQMAM+SD  PLE+EY+QW++EVERT GRM +KQDISEKKE
Subjt:  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKE

Query:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELR
        AIQ+ N+FVYSA TVKQMLQEKKSAS RP+N+AAEKDRLR+EL++A SK+D+   E+I + ++QLDASR  +  D KA++L EMN+KNR ENFKNASE++
Subjt:  AIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELR

Query:  PM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEANGAAEAGSNIDNVLPASEA--ATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLA
         +   LKAGEAGYDPFSRRWTRS NYY        GE N AA A +   N   A     AT AALEAAA AGKLIDT AP+  G E   LHNFEL +SL 
Subjt:  PM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEANGAAEAGSNIDNVLPASEA--ATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLA

Query:  MLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
         LQK+GGP G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRRGLL
Subjt:  MLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAGACCTAGAAAATTTACTTCTGGAGGCTGCCGGAAGAACTAACGCAGCTGGGAGAAATCGACACTCTCATCCACCATCACGAAGACAGCGTGAGGGTTCGTATTC
TGATGCTGGAAGTGATTCTAGGGACGATGACTCAGATGACGATCGTGGTTATGCAAGCAGGAAGCCTTCTGGTTCTCAGGTTCCTCTGAAGAAGAGGCTAGACCCTGCTG
ACAGAGATGATGATGCTGGTAGCCAAGAAGAAGGGGACGATGAAGATGTTGGTTTAGATCGTGAGGGTGACAGCAGTGGTGAATCTGATGTTGGGGATGATCTTTATAAA
GATGATGATGACAGGCTCAAACTTGCTGGTATGTCTGAACTTCAAAGGGAGATGATTCTGTCAGACAGAGCGTCGAAGAAGAACGATAAGCATTTATATGAAAGCTTAAG
AGCTAAGATGGATAAAGGGAAAGCTGCTCCCTCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCCTCAGCTAGATTTGCTGACAGAGCAGCTGCAAAAG
ATGATGCTTTAAATGAATTGCGCGCAAAAAGGTTGAAGCAGCAGGATCCAGAGGCTCATCGGAAACTGAGAGATGCATCTAAAGGGAATCTAAACAATCGGAGGCCCTCA
CCTACCAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGCTTCAAAGTGAAGATGAAGAGTCTACAGGAGATGGCGGAAT
GGTTGATAGTGATGATGAAAGATCCATGCCCGGTTCAGATGGGCCAACATTTGAAGATATCAAGGAAATTACTATTCGTAGATCAAAACTTGGAAAATGGTTGATGGAGC
CGTTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATCGGGAGGTCAAGATCTGGGCCTATCTACAGGCTATGCTTGGTGCGCAATGTTGATGCAACTGAA
CCTGATCGTCAGTATAAACTAGAGAACAAACTCACACATAAATATCTTAATGTTATTTGGGGAAATGAAAGTTCTGCCGCCAGGTGGCAGATGGCTATGGTGTCAGACTC
TGCACCACTTGAGGATGAATATAAACAGTGGCTTAAGGAGGTAGAGCGAACTGGTGGCCGGATGCTGAGCAAGCAGGATATATCGGAAAAGAAGGAAGCTATACAGAAAG
TTAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGAGAAAAAATCTGCCTCGTCAAGGCCATTGAATATTGCAGCTGAGAAGGACCGGCTGAGGAGA
GAGCTGGACGTAGCACTAAGCAAAGACGACAAAGTTGCTGCGGAGAAGATCAATGCAAGCCTGCAGCAATTAGATGCATCCAGGAGGTCGCAGATGAAAGATGCCAAGGC
TATTAGGTTAGTTGAGATGAACAGGAAGAACAGGGTGGAGAACTTCAAAAATGCATCAGAACTGAGACCAATGAAGGATTTAAAAGCTGGAGAGGCCGGTTATGATCCCT
TTTCTAGGAGATGGACCAGGTCGAGGAATTACTATGTTTCGAATGCTGGAGAAGCCAACGGGGCTGCAGAAGCAGGCAGCAACATCGATAATGTATTGCCTGCATCAGAG
GCTGCTACAGCAGCTGCTTTGGAAGCGGCTGCTGGGGCTGGAAAGTTGATCGATACTAATGCTCCTGTAGATGGAGGTACAGAATCATACTCACTGCACAACTTTGAGCT
GCCTATATCATTGGCTATGCTTCAGAAATTTGGTGGACCCTTGGGAGCTCAGGCCGGGTTCTTAGCTAGGAAACAGTGGATAGAAGCCACGGTTGGACGTCAAGTCCCTG
AGAATGATGGAAGGCGGCATGCACTGACGCTGACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

mRNA sequence

Show/hide mRNA sequence

CGGCGCACGAGTTTGTCTTCAAACCCCTCATCCCTTGTGTGTAGTACTTTTAGGGCAATTTCAGTTTACACCAATTCTTCGCTAAATCTCTCTCCATTGTTACCGTTGCT
CACAGCTCTGCGCTCGTTCTCTCTTCCTCGGTGAATCAAGCTATTTCTCAATCTAGGACTCTCAACGGTTCAAGGGCAAGTTCCCTTTCCAGGACAAACAGTCACATATT
TTTGTGCCGGAGGCTGCAAAACATGGCAGACCTAGAAAATTTACTTCTGGAGGCTGCCGGAAGAACTAACGCAGCTGGGAGAAATCGACACTCTCATCCACCATCACGAA
GACAGCGTGAGGGTTCGTATTCTGATGCTGGAAGTGATTCTAGGGACGATGACTCAGATGACGATCGTGGTTATGCAAGCAGGAAGCCTTCTGGTTCTCAGGTTCCTCTG
AAGAAGAGGCTAGACCCTGCTGACAGAGATGATGATGCTGGTAGCCAAGAAGAAGGGGACGATGAAGATGTTGGTTTAGATCGTGAGGGTGACAGCAGTGGTGAATCTGA
TGTTGGGGATGATCTTTATAAAGATGATGATGACAGGCTCAAACTTGCTGGTATGTCTGAACTTCAAAGGGAGATGATTCTGTCAGACAGAGCGTCGAAGAAGAACGATA
AGCATTTATATGAAAGCTTAAGAGCTAAGATGGATAAAGGGAAAGCTGCTCCCTCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCCTCAGCTAGATTT
GCTGACAGAGCAGCTGCAAAAGATGATGCTTTAAATGAATTGCGCGCAAAAAGGTTGAAGCAGCAGGATCCAGAGGCTCATCGGAAACTGAGAGATGCATCTAAAGGGAA
TCTAAACAATCGGAGGCCCTCACCTACCAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGCTTCAAAGTGAAGATGAAG
AGTCTACAGGAGATGGCGGAATGGTTGATAGTGATGATGAAAGATCCATGCCCGGTTCAGATGGGCCAACATTTGAAGATATCAAGGAAATTACTATTCGTAGATCAAAA
CTTGGAAAATGGTTGATGGAGCCGTTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATCGGGAGGTCAAGATCTGGGCCTATCTACAGGCTATGCTTGGT
GCGCAATGTTGATGCAACTGAACCTGATCGTCAGTATAAACTAGAGAACAAACTCACACATAAATATCTTAATGTTATTTGGGGAAATGAAAGTTCTGCCGCCAGGTGGC
AGATGGCTATGGTGTCAGACTCTGCACCACTTGAGGATGAATATAAACAGTGGCTTAAGGAGGTAGAGCGAACTGGTGGCCGGATGCTGAGCAAGCAGGATATATCGGAA
AAGAAGGAAGCTATACAGAAAGTTAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGAGAAAAAATCTGCCTCGTCAAGGCCATTGAATATTGCAGC
TGAGAAGGACCGGCTGAGGAGAGAGCTGGACGTAGCACTAAGCAAAGACGACAAAGTTGCTGCGGAGAAGATCAATGCAAGCCTGCAGCAATTAGATGCATCCAGGAGGT
CGCAGATGAAAGATGCCAAGGCTATTAGGTTAGTTGAGATGAACAGGAAGAACAGGGTGGAGAACTTCAAAAATGCATCAGAACTGAGACCAATGAAGGATTTAAAAGCT
GGAGAGGCCGGTTATGATCCCTTTTCTAGGAGATGGACCAGGTCGAGGAATTACTATGTTTCGAATGCTGGAGAAGCCAACGGGGCTGCAGAAGCAGGCAGCAACATCGA
TAATGTATTGCCTGCATCAGAGGCTGCTACAGCAGCTGCTTTGGAAGCGGCTGCTGGGGCTGGAAAGTTGATCGATACTAATGCTCCTGTAGATGGAGGTACAGAATCAT
ACTCACTGCACAACTTTGAGCTGCCTATATCATTGGCTATGCTTCAGAAATTTGGTGGACCCTTGGGAGCTCAGGCCGGGTTCTTAGCTAGGAAACAGTGGATAGAAGCC
ACGGTTGGACGTCAAGTCCCTGAGAATGATGGAAGGCGGCATGCACTGACGCTGACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGAAATCTGATGACTGCAAC
TAAACAGTAATCATTTGATATTACAGCGTGTTCTGGTCGTCGAGGATATGGCATATGGATGTTATTAAGTTCGAAAGGTAACTGTTTGATGCTCTCTTAATTTTAGTAAA
AATGTTGCCTGATTGTGGGAAATATTGAGCCTTTAGGTAATGTATTTGCTTATTGATTTTGCCTGTTGGTCTTCATTACTAATGCCTTGGAATTTCTCAGTGAAGATTAA
ATTAGTACAACACCCTTCTGTTACCTTTTTTTATATAAAAAAAAAACAACCCTTCTATTACTTGTTATGGTTATTTACAACATGATTTTAAAAATAGTTTTGCCTTGCTT
TCTACCACTACTGTTCGGATC

Protein sequence

Show/hide protein sequence

MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPADRDDDAGSQEEGDDEDVGLDREGDSSGESDVGDDLYK
DDDDRLKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKAAPSRKETPPLPSSRIRSSARFADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASKGNLNNRRPS
PTKRKPFTAPSLSSSSQSESESRLQSEDEESTGDGGMVDSDDERSMPGSDGPTFEDIKEITIRRSKLGKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATE
PDRQYKLENKLTHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTGGRMLSKQDISEKKEAIQKVNNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRR
ELDVALSKDDKVAAEKINASLQQLDASRRSQMKDAKAIRLVEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAGSNIDNVLPASE
AATAAALEAAAGAGKLIDTNAPVDGGTESYSLHNFELPISLAMLQKFGGPLGAQAGFLARKQWIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Sed0012938 (gene) of Chayote v1 genome